Gavialis gangeticus (Gharial): 109286897
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Entry
109286897 CDS
T07453
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109286897 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109286897 (CNOT3)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109286897 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109286897 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
109286897
NCBI-ProteinID:
XP_019357254
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSIMVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKSVHNNHHPQSPAVTPSYQLGSSSSTSSSLGNGPGSNSNGAVSSGSSAGNKASPA
TGHTPSTPTPYAQAVAPPPACTSASQPRPPSAQQNASKQNGATSYSSVVADSSSDSALSS
SSSQTLPSQPTPHNPPSSTAKEPGGAPPPHSTSSSSSNAATTTSSLLVPMTVNPPSSPTP
SFSEAKPGQPLLNGPPPFSSTPEIKAPEPLSSLKSMAERAAIGSSIEDPVPSLHLAERDI
LITSTTSQPASSQPPVQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSD
SERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKA
LKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDR
DLQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaggaaactacaaggtgaaatcgatcgctgcctgaagaaggtctctgaa
ggagtagagcagtttgaagacatctggcagaagctccacaatgcagccaatgcaaaccaa
aaggagaagtacgaagcagacttgaagaaagagatcaagaagctccagagactgagggac
cagatcaagacctgggtagcttcaaatgagatcaaagacaagagacagctgatagacaac
cggaagctcattgagacgcaaatggagcggttcaaggtggtggagcgggagacaaagacc
aaagcctactcaaaggaggggctgggcctggcacagaaggtggacccagcacagaaggag
aaggaggaggttggccagtggctcacgaacaccatcgacaccttgaacatgcaggtggat
cagtttgagagcgaggtggagtcgctgtcggtccagacccggaagaagaagggggacaag
gataagcaggaccggattgaaggccttaagcgtcacattgagaagcatcggtatcacatc
cgcatgctggagaccatcctgcgcatgctggacaacgactccatcatggtggactcgatc
cggaagatcaaggacgatgtggagtactatgtggactcctcacaggaccctgacttcgag
gagaatgagttcctctatgatgaccttgacctagaagacattccacaggctctggtagcc
acctccccgcccagccacagccatatggaggatgagatcttcaaccagtctagcagcact
cctacctccaccacctccagctcgccaattccgcccagccctgccaactgcacgacggag
aactcggaagatgacaagaagagggggcgatcaacagacagcgaagttagtcagtcacct
gcgaagaatggttcgaagagcgtccacaacaaccaccacccgcagtcgccagctgtcaca
cctagctatcagctggggagcagttcaagcacctcgtcctcattgggcaatggccctggc
tccaacagcaatggggctgtgtccagtgggagcagtgctggcaacaaggccagtccagcc
acagggcacacacccagcacccccacgccctatgcccaggctgtcgcacccccacctgcc
tgcaccagcgcctcacagccccggccccccagtgcccagcagaatgctagcaagcagaac
ggtgccacgagttatagctctgtggtggctgacagttcatcagactcagccctgagcagc
agcagcagccagacgcttcccagccagccgacaccccacaatccccccagcagcactgcg
aaagagcctggtggagcccccccaccacacagcaccagcagcagctccagcaatgctgcc
actaccacctccagccttttggtccccatgacggtgaatccccccagctccccaaccccc
agcttttcggaggccaagccaggccagccgcttctcaacggtccgccccctttcagctcc
acccctgagatcaaggcacctgagcccctcagcagtctgaaatcaatggccgagagagca
gccattggctccagcatagaggaccctgtgccatcgcttcaccttgctgaaagggacata
ctgattactagcacaacctcgcagccagcctctagtcagcccccagtccagctctcggag
gtgaacatcccgctctccctgggggtctgtcccctggggccagtgccactcaccaaagag
cagctctaccagcaggccatggaggaagcagcctggcaccacatgcctcacccctcggac
tcggagaggatccggcagtatctgccccggaacccttgcccaactcccccttaccaccac
cagatgcctccgccgcactcagacactgtggagttctaccagcgcctctcaacagagacg
ctcttcttcatcttctactatctggagggtaccaaggcacagtacctggcagccaaagcc
ctgaagaagcagtcgtggcggttccacaccaagtacatgatgtggtttcagcggcatgag
gagcccaagaccatcacagatgaatttgagcagggcacgtatatctactttgactacgag
aaatggggccagaggaagaaggaaggcttcacctttgagtatcgctacctggaggatcgg
gacctgcagtga
DBGET
integrated database retrieval system
