Gavialis gangeticus (Gharial): 109286983
Help
Entry
109286983 CDS
T07453
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109286983 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109286983 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ggn00536
]
109286983 (TNR)
Glycosaminoglycan binding proteins [BR:
ggn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109286983 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_2
FN3_Tor_3rd
NDNF
EGF
Lzipper-MIP1
MerR_2
Motif
Other DBs
NCBI-GeneID:
109286983
NCBI-ProteinID:
XP_019357383
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MGTDSENIVLRNMIISLNLIFLGLVLKPFECRLEVTTERIRRQVVDEEGSFANYSPPIKE
KPMVFNHVYNINVPLDSLCSTLFEASADQEVSSEDDRMTEYTEQTSDSESQVTFTHRINL
PKQACKCSTSSQLMQDLLNRIEMLEREVSMLRDQCNSNCCQENAATGQLDYIPHCSGHGN
FSLESCSCMCNEGWIGKNCSEPHCPMGCSSRGVCVEGQCICDNDYSGDDCSEVRCPTDCS
SRGLCMDGECVCEEGYAGEDCSELRCPNDCSGKGRCANGTCVCQEGYVGEDCGHLRCLNA
CSGRGICQEGMCSCEEGYKGQDCSAVAPPEDLRVAGISDQSIDLEWGGPMAVTEYVISYQ
PAVPGGIQLQQRVPGDWSAITIKELEPGFTYNISIYAVISGIFSVPVTVKVTTHLSVPRG
LKFKTITETTVEVQWESFAFPFDGWEISFIPKNNEGGVIAQLPSSVTTFNQTGLKPGEEY
TVNVVALKEQARSPPTSDSVSTLIDGPTQIMVRDVSDTVAFVEWTPPRAKVDYILLKYGL
VNGEGGKTTFRLQPPLSQYSMQALRPGSQYEVSISAVRGTNESDPAVTHFATEIDAPKNV
RVGFRTSASLELEWDNSEAEVQNYKVVYSTLAGEQYHEVLVPRNSGPTTKTTLIDLVPGT
EYGVGISAVMDSQQSVPATMNARTELDSPRDLIVTASTETSVSLVWTKTKGPIDHYRITF
TPASGMASEVTVPKDKSELTLSDLEPGMEYTISIIAERGRQQSLESTVDAFTGFRPITQL
HFSHVTSSNVNITWSDPSPPADRLILNYNPRDKEKETKQVTLDGTKRHATLSGLQPSTEY
IVSLVAVHGMVSSEPIMGSITTGIDPPKDLAVGNVTENSMTIFWAPPIAAFDHYRISYQS
AQGREDTTPIAKDITAYTLSRLQPATEYEINLKSVRGREESERTSISMYTAMDNPLGLTA
TNVTPTEALLQWNPPLSEVENYVIVLTHYTVAGETILVDGTNQEYQLTNLLPSTTYTVTM
YATNGPLTSRTVSTNFTTFLDPPTNLTASEVTRRSALLSWQPPMAEIENYIMTYRSTDGS
RKELIVDAEDTWIRLEGLSETTEYTVRLQAAQNAMRSGFTSTTFTTGGRVFANPQDCAQH
LMNGDTLSGVYTISVNGDIGQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWVDYRVGF
GNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQETAYAYYDKFSVADARSLYKLRIGDYN
GTSGDSLTYHQGRPFSTQDRDNDVAVTNCASSYRGAWWYKNCHRTNLNGKYGESRHSQGI
NWYHWKGHEFSIPFVEMKMRPYNHRYVSGRKRRSLQL
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacagtgaaaacatagtcctgagaaacatgattatcagtctcaatttgata
ttcctgggattagtcctcaagccctttgagtgtcggctagaagttacaacagagaggata
aggaggcaggtagtggatgaggaaggcagctttgccaactacagcccaccaatcaaagaa
aaaccaatggtcttcaaccatgtgtacaacattaacgtgcccctggacagcctctgctca
acattgttcgaggcctcagctgaccaggaggtgagttcagaagacgacaggatgacggaa
tacacggagcagacctcagacagcgagagccaggtcacctttacgcacagaataaacctc
cccaagcaggcgtgcaagtgctccacatcctcccagctcatgcaggacctgctgaacaga
attgaaatgctggagagggaggtttccatgctacgggaccaatgcaactccaattgctgc
caagaaaatgcagccacagggcagctggattacatccctcactgcagcggtcatgggaac
ttcagtctggaatcttgcagctgcatgtgcaatgaaggctggattggaaagaactgctca
gagccccactgccccatgggctgctccagccggggcgtgtgcgtggaaggccagtgcatc
tgtgacaatgactacagtggggatgactgctcagaggtccgctgtccaacagactgcagt
tcccgagggctttgcatggatggggagtgtgtctgtgaggaaggttatgctggagaagac
tgtagcgaactgagatgccccaatgactgctctggaaaggggagatgtgccaacggtacc
tgtgtctgccaggagggctatgtgggagaagactgtggtcatctcaggtgcttgaacgcc
tgcagcggacgtggcatctgccaggaggggatgtgctcttgtgaagaaggttacaaaggg
caggattgctcagcagttgctccacccgaggacctgagagtggctggaatcagtgaccag
tccattgacctggaatggggtggtccaatggctgtgacagaatatgtgatctcctatcag
ccagcagtaccagggggcattcagctacagcaacgagtgcctggagactggagtgctatc
accatcaaggagctggaaccaggcttcacatacaatatcagtatctatgctgtcatcagt
ggcatctttagtgtccctgtcactgttaaggtgactacccatctctctgttccacgggga
ttgaagttcaagactatcacagagaccactgtggaggtgcagtgggagtccttcgcattc
ccttttgatggctgggagatcagcttcattcccaagaacaatgaaggcggcgtgattgca
cagcttcctagcagtgtcaccaccttcaaccagacaggactgaaaccaggggaagagtac
accgtcaatgtcgtagcactcaaggaacaagccaggagcccccctacttctgacagcgtc
tcaaccttaattgatgggccaacccagatcatggtgcgagacgtctcagacacagtggcc
tttgtggagtggaccccaccacgagccaaagtagactacatcctgctgaagtatggcttg
gtgaatggggaagggggaaagaccaccttccgcctgcagcctcctcttagccaatattca
atgcaagccctgcggcctggctcacagtacgaagtctccataagtgctgtacgagggact
aatgagagtgacccagctgtcacccactttgcaacagagattgatgctcccaagaacgtc
cgtgttgggtttcggacatcagccagcttggaacttgagtgggataacagtgaggccgag
gtgcagaattacaaggtggtgtacagcacgctggcaggcgagcagtaccacgaggtgctg
gtgccacggaactcagggccaacaaccaagaccacactcattgatcttgtgccaggaaca
gaatacggtgttggcatatcagctgtcatggacagtcagcagagtgtgccagccaccatg
aacgctagaactgaacttgacagtcctcgtgacctcattgtgacagcctccacggaaaca
tctgtctccctggtctggaccaaaaccaaagggcccatcgatcactaccgcattaccttt
actccagcctcagggatggcctctgaggtgacggtacccaaagacaaatctgagctcact
ctgtcagacctggagcctggaatggagtataccatttccatcatcgcagagaggggccgt
cagcagagcctagagtccacagtggatgcattcacaggtttccgacccatcacacagcta
catttctctcatgtgacttcttccaatgtgaacatcacctggagcgatccctcccctccc
gcagacaggcttatcctaaactacaaccccagagacaaagagaaggagaccaagcaggtc
acgctagatggaaccaagagacatgccaccttgtctggactgcagccatccacagagtac
atcgtgtcactagttgctgtgcatggcatggtcagctctgagcccataatgggctccatc
acaacagggattgatcctcctaaggaccttgctgtgggcaatgtgactgagaactcaatg
accattttctgggccccacccattgcagcttttgaccattacagaatttcctaccagtct
gctcaaggaagagaggacaccacaccaattgccaaagacatcactgcatacactctcagc
cgcctgcagccagctactgagtatgagattaatctaaaaagtgtgcggggccgggaagag
agtgagcgtacctccatcagcatgtacacagccatggataatccactgggtctgaccgcc
accaatgtcacaccaacagaggctctgctgcagtggaacccccctctgtctgaagtagag
aactatgtcattgtgctaacacactacacagtggcaggggagacaattctagtggatggg
acaaaccaagaataccagctaaccaacctgctgcccagcactacctatacagtcaccatg
tatgccaccaatggccctctcaccagcaggaccgtcagcaccaactttacaacttttttg
gatcctccaacaaacctgacagccagtgaggtcacccgccggagtgccctcctttcgtgg
caacctcccatggcagagattgaaaactacatcatgacctacagatcaactgatggaagc
cggaaggagctaattgtagatgcagaggacacctggatccgcctggaggggctgtcagag
actacggaatacactgtacgcttgcaggcagcccagaatgccatgagaagtggattcacc
tccaccaccttcaccacaggaggccgcgtgtttgctaatcctcaggactgtgcccaacat
ttgatgaatggagacactctgagtggagtctacactatctccgtcaatggagatattggc
cagagggtgcaggtgtactgcgacatgactacagatggcggcggatggattgtgtttcag
agacgacaaaatggtctgacagatttttttcgaaaatgggtggattatcgtgttggtttt
ggaaacctagaggatgagttttggctgggtctggataacatacacaagatcacatcacaa
ggacgctatgagctgcggatagacatgcgagatggccaggagacagcttatgcctattat
gataaattctctgttgctgatgccaggagtctgtacaagctccggataggagactacaat
ggcacctctggtgattcactcacctatcaccaaggccgcccattctccacccaggacaga
gacaatgatgttgctgtgacaaactgtgcctcttcatacagaggggcttggtggtataag
aactgtcaccgaactaacctcaatggcaagtatggcgagtcccggcacagtcagggtatt
aactggtaccattggaaaggccacgagttctctataccctttgtggaaatgaagatgaga
ccttacaaccaccgttatgtctcggggagaaaacggcggtctctacagctctga
DBGET
integrated database retrieval system
