Gavialis gangeticus (Gharial): 109286985
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Entry
109286985 CDS
T07453
Symbol
TNN
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109286985 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109286985 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ggn00536
]
109286985 (TNN)
Glycosaminoglycan binding proteins [BR:
ggn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109286985 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
EGF_TEN
DUF4998
EGF_Teneurin
EGF_2
EGF_Tenascin
GapR_DNA-bd
Motif
Other DBs
NCBI-GeneID:
109286985
NCBI-ProteinID:
XP_019357385
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MRPTISLKNYKMGYWHNMSFILWVLLYNALQTAALQLPASQNCTSKGQKISLSHSYKIDL
PKSSQIQVEEDPLPLKDESHTLPDMGETEGEEQNIIFRHNIRVLTPKDDCEALDHLRALL
ERMEKLEKEVMELREACNPQKCCGGGQAGVSDCSSHGTFIQEICSCNCDEGWEGSDCSRP
SCPNSCSGNGHCVNGKCICHEPYVGEDCSQRLCPENCSGNGICNNGVCQCYEEFLGDDCS
EKRCPNDCNGNGFCDTGECYCHDGFVGLDCSQVLAPQNLQLLKTTEGSLTLSWDEVIDVD
YYLISYYPMGYQTSVKQVRVPKGQLSYEIVGLRPSTTYNITLRHVKKGISSDPENLQAST
ALSVVGAIWVTDETEDSLEVEWENPPGEVDYYKLRFRSLPGQGEEEVMVPKSSEPKSRYI
ITGLKPGTVYNITVIYMKDNIEGKPSSVTGRTGLDGPTNLVTDRVTEDTATISWKGVQAP
IDRYMVSYTSADGDSKEVAVRKDKTMTTVTGLRPGMEYIIYIWAEKGAHQSKRTSTKAVT
EMDGPTNLVTDQVTEDTATISWKGVQAPIDRYMVSYTSPDGHARELPVGQDRSVHTLTGL
RPGVEYIIYIWAEKGTQQSKSTNTTAVTEIDSPTNLVTDQVTEDTATISWKAVQAPIDRY
MVSYTSPDGDSREMAVGNDRSITTLTGLKPGLEYVIYIWAEKGTQQSKRADTKALTEIDS
PTNLVTDQVTEDTATISWKQVQAPIDRYMVSYTSPDGDKREMAVRKDKSITTLTGLRPGV
EYIIYIWAEKGTQQSKRADTRAVTEIDSPTNLVTDQVTEDTATISWTGVQAPIDRYMVNY
TSLDGDSREMAVGKDRSITLTELRPGMEYIIYIWAEKGTQQSKRASTEALTEIDGPTNLV
TDQVTEDTATISWKQVQAPIDRYMVSYTSPDGDAREMAVGKDRSVTTLTGLKPGMEYIIY
IWAEKGTQQSKRADTRTVTEIDSPINLVTDRVTEDTATISWQGVQAPIDRYMVRYTLPDG
DAKEMAVGKDKSVTTLTGLRPGMEYIIYIWAEKGAQQSKKANTKALTEIDPPKNLRVSDV
TQSTSIVNWTPPTAQIDGYTLTYQGVDGTSKEVQLGPYDQRFMLEGLGKGVRYTVYVLAF
KGDRQSRKASNSFSTVGFLYPYPADCSQMQQNGNATSGMYTIYLNGDASRPMEVYCDMTT
DGGGWIVFQRRNTGELDFYKRWRNYVEGFGDPMGEFWLGLDKLHSLTSATPIRYEIRVDL
RTSNESAYAVYDFFQVASSRDRYKLSVGNYRGTAGDALTYHNGWKFTTWDRDNDVALSNC
ALAHRGAWWYKNCHLANLNGKYGETKHSEGVNWEPWKGHEFSIPFTEMKIRPQSSSNEPI
LGRKKRSLAGERKKIRV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaaccatctctctgaagaactacaagatgggttactggcataatatgtccttc
attctgtgggtcttactgtataatgctctccaaacagcagctcttcaactgcctgcatct
cagaattgcaccagcaaaggtcagaaaatctccctcagccactcatacaagattgacctg
cccaagtcatcccagatccaggtagaagaagatccattacccctcaaagatgaaagtcat
actctgcctgatatgggagaaacagagggcgaggagcagaatatcatattcaggcataac
atccgagtcctcacaccgaaagatgactgcgaagccttggaccacctcagagcccttctg
gaaaggatggagaagctggagaaagaagtgatggagctgagggaggcctgcaatccacag
aagtgttgtgggggaggccaagcaggcgtttcagattgcagtagccatggaactttcatc
caagagatctgcagctgcaactgtgacgaaggctgggaaggaagtgactgctctcgtccc
agctgccccaacagctgtagtggcaatggtcactgtgtcaacggcaaatgcatctgccat
gagccctatgttggtgaggactgcagtcagcggctgtgccctgagaactgcagtggcaat
ggcatctgcaacaatggtgtttgccagtgttatgaggagttccttggagatgactgcagt
gagaagagatgtcccaatgactgtaatggcaatgggttctgtgacacaggcgagtgctac
tgccatgatggctttgttggccttgattgctcccaagtgcttgcccctcagaatctgcag
ctgctaaagaccacagagggttccctgacccttagctgggatgaggtgattgatgtggat
tattatctcatcagctattatccaatgggttaccagacctctgtaaaacaagtcagggtg
cccaaaggacaactcagctatgagattgtgggccttcgccccagcacaacatataacatc
acgcttcgccatgtgaagaaggggatttccagtgacccagaaaatctacaagcaagcaca
gccctgtctgtggttggtgccatctgggtgacagacgagacagaggactcactggaagtg
gagtgggagaatcctccaggagaggtggattattacaagctaaggttccgctcactgcct
gggcaaggtgaagaggaggtgatggtgcctaaaagcagtgaaccaaagagcagatacatc
atcactggcttgaaacctggcacagtgtataatattactgtcatatacatgaaggacaat
atagaggggaaaccatcatcagtgactggcaggactggattagatggcccaactaacctg
gtgactgatcgagtgacagaggacacagccaccatctcctggaagggggtccaggctccc
atagacaggtacatggtgagctacacctcagctgatggggacagcaaggaggtggcagtc
aggaaagacaagaccatgaccactgtgactggcctgaggccaggcatggaatacatcatc
tatatttgggctgagaagggagcccatcaaagcaagcggacaagcactaaagctgtgaca
gaaatggatggcccaactaacttggtgactgaccaagtaacagaggacacagccaccatc
tcctggaagggggttcaggctcccatagacaggtacatggtgagctacacctctcctgat
ggtcatgccagggagctgccagtggggcaggacagaagtgtccacaccctgacaggactg
aggccaggtgtggagtacatcatctacatctgggctgagaaaggaacccagcagagcaag
agcacgaacactacagctgtgacagaaattgacagtccaactaacctggtgactgatcaa
gtgacagaggacacagccaccatctcctggaaggcagttcaggctcccatagacagatac
atggtgagctacacttctcctgatggggacagcagggagatggctgtggggaatgacagg
agcattaccaccctgacgggactgaagccaggcctggagtatgtcatctacatctgggct
gagaaaggaacccagcagagcaaaagggcagacactaaggcactgacagaaattgacagc
ccaactaacctggtgaccgatcaagtgacagaggacacagccaccatctcttggaagcag
gtacaggctcccatagacagatacatggtgagctacacctctcctgatggagacaaaagg
gagatggcagtgaggaaggacaagagcatcaccactctgactggactgaggccaggtgtg
gagtatattatttacatctgggctgagaaaggaacccagcagagcaagagggcagacact
agagctgtgacagaaattgacagcccaactaatctggtgactgatcaagtgacagaggac
acagccaccatctcctggacgggtgttcaggcacccatagacagatatatggtgaactac
acttctcttgatggggacagcagagagatggcagtggggaaggataggagcatcaccctg
acagaactgaggccaggcatggagtatatcatctatatctgggctgagaagggaactcaa
cagagcaagagggcaagcactgaagcactgacagaaattgatggcccaactaatctggtg
actgatcaagtgacagaggacacagccaccatctcatggaagcaggtccaggctcccata
gacagatacatggtgagctacacctctcctgatggagatgccagagagatggcagtgggg
aaggacaggagcgtcaccacccttacaggcctgaagccaggcatggagtacatcatctac
atctgggctgagaagggaacccagcagagcaagagggcagacactagaactgtgacagaa
atcgacagcccaattaatctggtgactgaccgagtgacagaggacacagccaccatctct
tggcagggagtccaggctcccatagacaggtacatggtgaggtacaccttacctgatggg
gatgcaaaggagatggcagtggggaaggacaagagtgtcaccactctgactggactgagg
ccaggcatggagtacatcatctacatctgggctgagaagggagcccagcaaagcaagaag
gcgaacactaaagcattgacagaaattgaccctccaaagaacctccgtgtgtcggatgtt
acacagtctaccagcatagtgaactggacaccaccaactgcacaaatcgatggctacact
ctgacctatcagggtgtagatggcaccagcaaggaagtgcagttgggtccttacgaccaa
aggttcatgttggaaggactgggaaaaggggtgagatacacagtttatgtgctggctttc
aagggagaccgccagagcaggaaagcaagcaattctttctcgacagttggcttcctctac
ccctaccctgcagactgcagccagatgcaacaaaatgggaatgctaccagtggcatgtat
actatctacctgaatggtgatgctagcaggcccatggaggtgtactgcgacatgaccacg
gatggaggcggatggattgtttttcagaggcggaatacaggggagctggatttctacaag
cgttggaggaattacgtagaaggctttggagatcctatgggggaattttggcttggtctt
gacaagctgcacagtctcaccagtgccacacccatccgatatgagatccgggtggatttg
cggacttccaatgagtctgcctatgctgtctatgatttcttccaagttgcctcaagcagg
gatagatacaagctgtctgtagggaattacagaggcactgctggggatgcgctgacttac
cacaatggctggaaatttacaacgtgggacagagacaatgatgtggctctgagcaactgt
gctcttgcgcatcgtggtgcctggtggtacaagaattgccacttggctaatctcaatggc
aaatacggggaaaccaagcacagtgagggagtgaactgggagccatggaaaggccatgag
ttctccattcctttcactgagatgaagatccgtcctcaatcatccagcaatgagcctatc
ctggggaggaaaaagaggtctctggcaggggagaggaagaagatcagggtttaa
DBGET
integrated database retrieval system
