Gavialis gangeticus (Gharial): 109287172
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Entry
109287172 CDS
T07453
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggn03009
]
109287172 (RRP12)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
90S particles
Other 90S particles
109287172 (RRP12)
Pre-60S particles
Other pre-60S particles
109287172 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
109287172
NCBI-ProteinID:
XP_019357681
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MAAPIDDVAVYPETWEEHTQHLAAVPEEFGLSDCTSGTFGRVRRLWESRSAAHKEICAVL
AAVTEVIRAQGGRETETEYFAALMTTMEAVESAESLAAVAYLLNLVLKRVPAPVLRKKFS
DASKAFMSILASQAGSSSTSALRWVVSCLATLLRKQDLAAWSYPVTLQVYHGLLSFTVHA
KPKVRKAAQHGICSVLKGSECLFGDAAPEHHPAARSTAKFCVQEIEKAGGTKEATTTLHV
LTLLRDLLPCLPAATTKTCCETLLRVMTLGHVLVTACAMQAFHGLFSAQPSPACLSAELN
AQIITALYDYLPSESDLQPMLAWLAVMERAHVNLVGLQKELCWGHLPRLFTAAMTCLLSP
HPQVLSATAQTLKALLSECVAPHVTDLGPVSTSASGPAASLCKMFRAVEEGLTYRFHAAW
APVLQVLRAFFEACGKQGHPVMRKCLQSLCDLRLSPHFPHTAELDETVGAAVGTMGPEVV
LEAVPLGIDGREETLDFPRSWLLPVLRDHIRGARLGFFTSHFLPLAAALKDRAVELAQDG
KTLESKIYDTLQGQVWSLLPGFCRWPMDVVSSFKGLARTLGTALSERPDLRLPVCQALRT
LITKGCQTDAERTEVGRFAKNFLPILFNVYSQPGDDRRNSAHRRAVLDTVRTYLTVTEQQ
MVCGFLQKASEKLSSPDSSEFTRLSILDLIVAMAPYADEPTLGTLYRTIQPSLQTKEHGV
QKKAYRVLEEVCAAPHGPCQAFIRSNLGELKTVLLDSLKSATSPAKRPRLKCLLHIVKQL
TAEDEAFVTALVPEVVLCTKEVSVGARKNAFALLVEMGEAFLRFGPAPQEAMQRFLLLAY
AGLTGSVTMISCTLLALTRLLFEFKEHLGPGETGQLLQSVCLLLGSRTRDVVKAALGFLK
AALLLVDVKLLTTHVPTMLEALGALSDDMRRHFRMKLKNLFTKFIRKFGFELVQGLLPAT
HHKVLLNIRKAEGRGRRQRALRQAAAREQDPEALPRPRGDSMEEVLADSDEEEEEEERGR
RGPRQPQGQAWLKEGVGDEPLNFLDSNVAQRVLATRPGSSRAGRASRDFGVSEDGRLIIH
EDEDEDGEESRARDVDKETADLMQDVGLRSKKAQKRRFREEAGDEELEGDTASHYRAGGS
GIHRPLGKETAFGADYTSKKGRGDVKKAGRPDPYAYIPLNRAKLNRRKKAKLQGQFKGLM
KGAQRGAQAGHRHRPREPSV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacccatcgacgatgtggcagtgtaccccgagacctgggaggaacacacgcag
catctggcggcagtgccagaagagttcggcctcagcgactgcacgagcggcaccttcggc
cgcgtgcggcgcctctgggagtcccgctccgccgcgcacaaggagatctgcgccgtgctg
gcggccgtgacggaggtgatccgcgcccagggcggcagagagaccgagacggagtacttc
gctgcgctgatgaccacgatggaggcggtggagtccgcggagtcactggctgcggtcgcc
tacctgcttaacctggtgctgaagcgggtcccggcgcctgtgctgaggaaaaagttctcc
gatgcctcaaaagccttcatgagcatcctggcctcgcaagctggcagcagctccacctct
gccctgcgctgggttgtctcctgcctggccacgctgctgcggaagcaggacctggcggcc
tggagctaccccgtcacactgcaggtctaccacggcctgctcagcttcacggtgcacgcc
aagcccaaggtgcggaaggcagcacagcacggcatctgctccgtgctcaagggcagcgag
tgcctgtttggggatgcggcccctgagcaccacccggccgcgcgctccactgccaagttc
tgcgtgcaggagatcgagaaggctggaggcaccaaggaggccacgaccaccctgcatgtg
ctgacgctgctgcgcgacctgctgccctgcctgcccgcggccaccaccaagacctgctgc
gagaccctgctccgcgtcatgaccctcggccacgtgctggtgacggcgtgcgccatgcag
gccttccacggcctcttcagcgcccagcccagccccgcctgcctctctgctgagctcaat
gcccagatcatcacggcgctatatgactatttgcccagcgagagcgacctgcagcccatg
ctggcttggcttgccgtcatggagagggcccacgtcaacctggtcgggctgcaaaaggag
ctgtgctgggggcacctgccccggctcttcacagctgccatgacctgcctcttgtcgccg
cacccccaggtgctgtcagccaccgcgcagaccctcaaggcgctgctcagcgagtgcgtg
gccccccacgtgaccgacttggggcctgtttccacctccgcctctggccccgctgcctct
ctctgcaagatgttcagggcggtggaggaggggctgacataccggttccacgcggcatgg
gcacccgtgctgcaggtgctgcgggccttcttcgaggcatgtgggaagcaaggacacccc
gtcatgaggaagtgcctgcagtcgttgtgcgacctgcgcctgtccccgcacttcccccac
acagccgagctagatgagacggtgggggccgctgtgggcaccatgggccccgaggtggtg
ctggaggccgtgcccctgggcatcgacggcagggaggagacgctggacttcccgcgcagc
tggctcctgcccgtgctccgggaccacatccgcggcgcccggcttggcttcttcaccagc
cactttctgcccctggcagctgctctgaaggacagagctgtggagctggctcaggatggg
aagacgctggagtccaagatctatgacacgctgcaggggcaggtgtggtcgctgctgcct
gggttctgccggtggcccatggacgtggtgagctccttcaaggggctggcgcgcaccctg
ggcacggccctcagcgagcgccccgacctgcgcctccccgtgtgccaggccctgcgcacc
ctcatcaccaagggctgccagacggacgctgagcggaccgaagtcggccgcttcgccaag
aacttcctgcctatcctgttcaatgtgtacagccagccgggcgatgacaggcgcaactcg
gcacatcggcgtgccgtgctggacactgtccgcacctacctcactgtcaccgagcagcag
atggtgtgtgggttcctgcagaaagccagcgagaagctgagcagccccgacagctctgag
ttcaccaggctgtccatcctggacctgatcgtggccatggcaccctatgccgacgagccg
accctgggcaccctgtaccgcactatccagccctccctgcagactaaggagcacggggtg
cagaagaaggcgtaccgggtgctggaggaggtgtgtgcggcaccccacggcccctgccag
gccttcatccgcagcaacctgggggagttgaagaccgtcctgctggactccctcaagagc
gccacgtcccccgccaagaggccgcggctcaagtgcctgttacacattgtgaagcagctg
acggctgaggatgaagccttcgtcacggctctggtcccagaggtggtcctgtgcaccaag
gaggtgtcagtgggcgcccgcaagaacgcctttgcgctgctagtggagatgggcgaagcc
ttcctgcgcttcggtcctgccccacaagaggccatgcagcggttcctgctcctcgcctac
gcggggctcacgggctccgtcaccatgatcagctgcacgctgctggcgctcacccgcctc
ctcttcgagttcaaagagcacctgggcccgggtgagacgggtcagctgctgcagagcgtc
tgcctgctcctgggctcccgcacccgcgacgtggtcaaggccgcgctcggcttcctcaaa
gctgcgctgttgctcgtggacgtcaagctgctgaccacgcatgtccccaccatgctggaa
gccctgggggccctgtcagacgacatgaggcgtcacttccgcatgaagctaaagaacctc
ttcaccaagttcatccgcaagttcggcttcgagctggtgcaggggctgctgccggccacg
caccacaaagtgctgctaaacatccgcaaggccgagggccgtgggcggaggcagcgcgcc
ctgcgccaggcggccgcccgcgagcaggaccccgaggcgctgccaagacccagaggggac
agcatggaggaggtcctggctgactcagatgaggaagaggaggaggaggagaggggcagg
agggggccaaggcagccccagggccaggcgtggctgaaggagggcgtgggggatgagccc
ctcaacttcctggactcgaacgtggcacagcgggtgctggccacaaggccaggcagcagc
cgggccgggagagcgagccgcgactttggcgtatcggaggatgggcgcctcatcatccac
gaagacgaggatgaggacggggaggagagcagagccagagatgtggacaaggagacggct
gacctgatgcaggacgtggggctccggagcaagaaggcccagaagcgccggttccgcgag
gaggcaggtgacgaggagctggagggcgataccgcatcacactacagagcgggaggttct
ggcatccaccggccgctgggcaaggagacggcgtttggagctgactacacgtccaagaaa
ggcagaggcgacgtgaagaaagccggccggccagacccctacgcctacatccccctcaac
agggccaagctcaacagaaggaagaaggcgaagctgcaggggcagttcaagggcctgatg
aagggggcccagcgcggtgcccaggctgggcacaggcatcgccccagggagcctagtgtg
tga
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