Gavialis gangeticus (Gharial): 109287175
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Entry
109287175 CDS
T07453
Symbol
PPRC1
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator-related protein 1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109287175 (PPRC1)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
109287175 (PPRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109287175
NCBI-ProteinID:
XP_019357684
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MDCRRFLGWTQDAGIPSVDRPQGHLCSXAGHGIPSVDGSQVCLRSWAGHGIPGADGSEGV
SLRFLGWTQDAGIPSVDRPQGHLCSXAGHGIPSVDGSQGCLLSCTGCGNPSVDGSWGVSA
PGLDTRSXVPSARGRPGSGFLLAEXGSSRHPLSAAGGATASPQPPWPEGLVPMPAASRXT
HEPGQGQSVPPTPPAPPPLQCFLLDEASLLEEEMDSYWDSSVLSIIEDLGSHHENKGPLE
LHNELSLLTAITEILDGTDEATLSPFDTIADTELLASPREQESCALQLLGLSQASPERDG
PALEDQWGPWTQSSSSTPMVAGKAETELSWDRAPSCQEDAVVTPKRVPSQARRGQRKPLR
PWAQEQLALQRSDGEEEDDEAPSPRQDGSTAMGDLQMGTLELASAEARAEPPVAWLGEGD
VPCIISPAGGSLCDLVKSMHPYCLPAFTTDLDAAPKPANKDLLAAPAVLGIMSGGDGQSP
VVFHPLSPGFPCRDAPLPAREEGAAGGEGHGAPEEPLPAEGGPRQHQVPTPALGSKATGR
NVATPKETLPKAAADTAPPEAGGRDHHLQSDPQPSTEAPAGGKCQGSGWGRGRERARKSR
KKKSVEALSTQVRALGNSMASRLRSASSVPGRGSSEGQAPALPPPSRATHPSAQVSNFLA
EQLEQARKDAQLKLRPSHAPPRPRGRPRGSRNRRGCPEPPREPEVSRPAVESRAEQAVPS
STGPSPKEQEAAAGQCGEESEPAPCQASASPEPAPSTEQDAMGEAPQCPTPVEPARAENQ
AAACPPREARPKALSLTEYRQRMQHRVPGAGPGKEPEKQVAGKWPSIPEPPTELAEIPCL
VAPPAQPLAQPAETPGMQKGPEKPPSPPASSPPASKAPPAPALTTVAPVPPVPQLPFVPP
PVTGAAPTGVMSALATPYTVYPPVPSWPCFGPPPSGFPLTLLPPPATASPNAFHLVPGLP
PTGLAWPPPAVPPPPXXXXXAPYAPVGWSPAVPPPYWPSMTLPQLGPPLVFADPSSTPQS
PALGCSEPAAFAALPAPPFVAAAPEAPAATQASAAAPHAATDQPPAKTSRASDPRRQARP
VERPSAAPTAATAQAAKELPAATVKDPPAAPAQAKVLAAATVKDPPAATTETAKELPAAA
TGPVEEPPTTRELPPACPPAKPARNPPGAVPAQAHPAPRPPANRETVCGRATGAREGAKP
PAARPWRHRPLARPTQPSGCEDIVQAFISEIGIEASDLSSLLEQFEKTEAKKEESGVEGP
KDKPSSSSVGAEPQQDKKSLDSLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKPRSL
STAALEGTQKTTKLIEAQPLPHGKPRGKPLPATPPASSHVGAGDHDYCFLGSTGTPELGS
RWNVKHHADITIKPITSLALRTQDRPGPSLPAASAALDAPGASRKPLDHRTSTPGRGSPP
ASVLLSPDASPCRDKETRTPSARPPRSGAKRAVRCYRVRRDSGSPPDGTWRRQASRSFSA
SSNGGSEASSSSSSSSSASSSRSRSRSSSPPPKRWRRYRPRRSSCSRSSSPSSAGSCGSS
RSSSSSSYSSRSRSTSRSRSRSRSLSPCRRHSRRRRYSYDSQDHYQRQRLLQKERAIEER
RVVFIGKIPGRMTCSELRHRFSVFGDIEECTLHFRSEGDNYGFVTYRYAEEAFAAIERGH
TLRRPDEQPFDLCFGGRRQFCRRNYADLDSNREDFDPAPTRSKFDSLDFDTLLKQAQRSL
RT
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggattgtagacggttcctgggctggacacaggatgctgggatccctagtgtagacaga
ccccaggggcatctgtgctcctgagctggacatgggatccctagtgtagatggatcccag
gtgtgtctccgctcctgggctggacatgggatccctggtgcagatggatctgagggggtg
tctctgcggttcctgggctggacacaggatgctgggatccctagtgtagacagaccccag
gggcatctgtgctcctgagctggacacgggatccctagtgtagatgggtcccaggggtgt
cttctctcctgcaccggatgtgggaaccctagtgtggatgggtcgtggggtgtgtctgct
cctgggctggacacgcgatcctaggtcccgtctgccaggggaaggcctggatctggcttc
ctcctggctgagngggggagctcccggcatcctctgtctgcggctgggggagccactgca
agcccgcagcccccgtggccggagggacttgtcccaatgccggcagcttcgcgtngcaca
catgagcctgggcaaggccagtctgtgccccctaccccacctgctccccctcccctccag
tgcttcttgctggatgaggcgtccttgctggaggaggagatggacagctactgggactcc
tccgtcctgtccatcatcgaggacctcggctcccaccatgagaacaaaggccccttggag
ctgcacaacgagctgtcgttgctgactgccatcacggagatcctggacggcacagacgag
gcgaccctgtctcccttcgacactatcgcggacactgagctgctggcgtcaccccgggag
caggagagctgcgcgctccagctcctcggcttgtcccaggcctcccctgaacgggacggc
cctgccctggaggaccagtggggcccatggactcagagcagcagcagcacgcccatggtg
gctgggaaggctgagacagaactgagctgggaccgtgctccgagctgccaggaagatgct
gtggtgacgcccaagagggtcccgagccaggcgcggcgggggcagaggaagccgctccgg
ccctgggcacaggagcagctggccctgcagcgcagtgacggggaggaggaggacgacgag
gcgcccagccccaggcaggatggcagcactgccatgggagacctccagatgggcaccctg
gagctggcaagcgcggaggccagagcagagcccccagtggcctggctgggggagggggac
gtgccctgcatcatcagccccgcaggtggctcgctgtgcgacctggtgaagtccatgcac
ccctactgcctgcctgccttcaccactgacctggatgctgcgcccaagccagccaacaag
gacctgctcgctgcccccgctgtgctggggatcatgtccggtggcgatggccagagccct
gttgtgttccaccccctcagcccaggcttcccctgccgcgatgccccgctcccagccagg
gaggaaggtgctgccgggggtgaggggcatggtgccccggaggagccattgcctgcggag
ggggggccacggcagcaccaggtgcccacccctgctttggggagcaaagctacaggacga
aatgtggccaccccgaaggagaccctgcccaaggcagcagctgacacggccccaccagag
gcaggcgggagggaccatcatctgcaaagcgacccccagcccagcacagaggcgccagct
ggtgggaagtgccagggctctggatggggccggggccgcgagcgggcacggaaaagccgg
aaaaagaagagcgtggaggcgctgagcacccaggtccgggcccttggaaactccatggcc
tcccggctccgctcagcctcctctgtcccagggcgggggtcctctgaggggcaggccccg
gccctgccaccccccagccgggccacccacccctcggcacaggtgtccaacttcctggcg
gagcagctggagcaggccaggaaggatgcacagctgaagctgcgcccaagccacgcgccc
ccccggccccggggcaggccccggggttcccggaacaggagaggctgccctgagcccccc
cgggagcctgaggtcagcaggcccgcggtggagagcagagcagagcaggccgtgcctagc
agcacagggcccagcccaaaggagcaagaggcagcagctgggcagtgtggggaggagagc
gagcctgccccgtgccaggccagcgccagcccggagcctgcgcccagcaccgagcaggat
gccatgggggaagctccccagtgccccacacccgtggagccagcacgagccgagaaccag
gcggccgcgtgtcccccacgggaagcccggcccaaagccctgagcctaaccgagtaccgc
cagcgcatgcagcaccgtgtgcccggcgccggccctggcaaggagcccgagaagcaggtg
gccggaaagtggcccagcatccccgagccccccactgagctggccgagatcccctgcctg
gtggcaccaccggcgcagcccctggcccagcctgcagagacgcctggcatgcaaaagggc
cctgagaaacctcccagtccacctgccagttctccgccggccagcaaggcccctccggcc
ccagctctgaccaccgtggccccagtgccccccgtgccgcagctgcctttcgtgccgcca
ccagtgactggggctgctccaactggggtcatgtcagccctggcgactccttacaccgtc
tacccaccggtgccttcctggccttgctttggccccccaccctctggcttccccctgacg
ctgctgccaccaccagccaccgcctcacccaatgccttccacctggtgcctgggctgccg
cccacgggcttggcctggccacccccagccgtgcccccacccccannnnnnnnnnnnnnn
gctccctacgcccccgtgggctggagcccagccgtgccgcccccatactggcccagcatg
accctgccccaactggggcctccactggtgttcgccgaccccagcagcaccccacagagc
ccagcgctgggttgctcggagccggcggcctttgctgcactgcccgcgccacccttcgtt
gctgctgcccctgaggcaccagcagccacccaggcttctgctgcagctccgcatgcagcc
actgatcagcccccagccaagacgagcagggcatccgacccccggcggcaggcgcggcct
gtggagaggccttcagctgcccccactgctgctactgcgcaggctgcgaaggagctgccg
gctgctaccgtgaaggacccaccggctgcacccgcccaagccaaggtgctagcggctgct
accgtgaaggacccaccagctgctaccaccgagactgcgaaagagctgccggctgctgca
accgggcccgtggaagagccccctacaaccagggagctgcctcccgcctgtcccccggca
aagcccgccaggaacccgccaggagccgtgccggcacaagcccacccggcgcctcgcccc
cctgccaaccgtgagaccgtctgcgggagagcgacgggggcgcgagagggtgccaagcca
cctgctgcccggccctggagacaccggcccctggcccgccccacccagcccagcggctgc
gaggatattgtccaggccttcatcagcgaaatcggcattgaagcctccgacctgtccagc
ctgctggagcagtttgagaagacggaagccaaaaaggaggagtctggagtggaggggccc
aaagacaagccatcttccagcagtgtgggagcggagccgcagcaggacaagaagtccctg
gacagcctgcaggctcccgagctcgccaacgtggcaggcctgaccccaccagcaacaccc
ccccaccagctgtggaagcccctggccgccgtgtcgctgctggccaagccgcggtccttg
agcaccgccgccctggagggcacccagaagacaaccaagctcatcgaggcccagccactg
ccccatggcaagccccgcgggaagcccctgcccgccacgccccccgcctccagccacgtg
ggtgctggagaccatgactactgcttcctgggcagcaccggcacgccggagctgggatcg
cgctggaacgtgaagcatcacgcggacatcaccatcaagcccatcacctcccttgccctg
cggacgcaggatcggcctggcccctcactacctgctgccagtgctgccctggatgcccct
ggggccagccgcaagccactggatcaccggactagcaccccaggcaggggcagccccccc
gcctcggtgctgctgtctccggacgcgtccccctgccgggacaaggagacacggactccc
agcgcgcggcccccgcgctcgggtgccaagagggccgtacgctgctaccgtgtgcgccgg
gactcgggcagccccccagacggcacctggcggcgccaagccagccgctccttcagtgcc
agctccaacgggggcagcgaggcgtcctcttcctcctcctcctcttcctccgcctcttcc
tcgcggtcccgctcccggtcctcgtcccccccacccaagcggtggcgcaggtaccggccg
cggcgctcctcctgctcccgctcctcctcgccctccagcgccgggtcctgcggcagctcc
cgcagcagctcgtcctcgtcctactcgtcccggtcccggtccacatcccgcagccggtcc
cgctcccgctccctgtcgccctgcaggaggcacagccggaggaggcggtacagctacgac
tctcaggaccactaccaaaggcagagactcctgcagaaggaacgtgcaatagaggagagg
cgggtcgtcttcatcgggaagatccccggcaggatgacgtgctcggagctgcggcaccga
ttctccgtgttcggggacattgaggagtgcaccctccacttccgctccgagggcgacaac
tacggcttcgtgacataccgctacgccgaggaggcctttgctgccatcgagcgcggccac
acgctacggcgcccagatgagcagcccttcgacctctgctttggtgggcgccgccagttc
tgccgccgcaactatgctgacctggactcgaaccgggaggacttcgacccggctcccacc
cgcagcaagtttgactctctcgacttcgacaccctgctgaagcaggcgcagcgcagcctg
cgcacgtag
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integrated database retrieval system
