Gavialis gangeticus (Gharial): 109287359
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Entry
109287359 CDS
T07453
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03020
RNA polymerase
ggn04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109287359 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109287359 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109287359 (POLR3A)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109287359 (POLR3A)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109287359 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
Motif
Other DBs
NCBI-GeneID:
109287359
NCBI-ProteinID:
XP_019357904
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLTSE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKSICPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSNFLQSFEAAIENNKEIESLLGRAQENLNPLIVLNRFKRIPAEDIPLLLM
NPETGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANIDFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCTNDSYVTIHNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIVQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQSEPALSKNELVLTAESIMKKNEFLC
CQDSFLQEIKKFLKSISEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDIDDDSDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKIV
VQGIPEVSRAVIHIDEQSGKQKYKLLVEGDNLRAVMATHGVKGTKTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESTPPTRPLIFD
SNEFHIPIIA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacggacgtggccaagaagataagccacatctgcttt
gggatgaagtctcctgaggagatgcgccagcaggcccacatccaggtggttagcaagaac
ttgtacagccaggacaaccaccatgccccgctgcagtatggggttctggaccatcgcatg
ggtaccagtgaaaaggaccgtccatgtgaaacatgtgggaagaatcttgctgactgtttg
gggcattatggctacattgacttggaactgccatgtttccatgttggctacttcaaagct
gtgataggtatcttacagatgatttgcaaaacctgttgccgcattatgctgacctcagaa
gaaaaaaaacagtttttggattatttgaagagacctggcttgacatatctccagaaacga
ggactgaaaaagaaagtctctgaaaagtgcagaaagaaaagtatctgtccttactgtggg
gcttttaatggtactgtgaagaaatgtggtttattgaagataatccatgagaagtacaag
accaataagaaagtggtggatccagttgtatccaatttccttcagtcttttgaagctgcc
atagaaaataacaaagaaatagaatccttgctggggagagctcaggagaacttgaaccct
ttaatagtgctaaaccgctttaaaaggatcccagcagaagatatccctctgcttctgatg
aacccagagacaggaaagccttcagatttgattctgacacgactcttggtgcctcctttg
tgtattcgaccatctgtagtgagtgacttgaagtctggtaccaatgaagatgacttgaca
atgaaactgacagaaattattttccttaatgatgtaataaaaaagcataggatatcggga
gccaaaacacagatgataatggaagactgggacttcctacagctgcagtgtgctctctac
attaacagcgagctctctggaattccccttaacatggcacctaagaaatggaccagagga
tttgtccaaaggctgaaagggaagcagggtcggtttagaggcaacctgtctggaaagcga
gtggacttctcaggcagaacagttatctcccctgatcctaatttacgaatagacgaggtg
gcagtacctgttcatgttgccaaaatattaacatttcctgaaaaagtgaacaaagcaaac
atagatttcttgaggaaacttgttcgcaatggtcctgaggttcaccctggagccaacttc
attcagcaaaggcacacacagatgaaaagatttttgaaatatggcaaccgagagaagatg
gctcaggagctgaagtttggggacatagtggaacgacatcttatagatggggatatagta
ttgttcaaccgacagccctctctccacaagctgagcatcatggctcacatagctagagtc
aaaccacacaggactttcaggtttaatgaatgtgtctgtacaccatacaatgcagatttt
gatggagatgagatgaaccttcatcttccccaaacagaagaggccaaagcagaagcactt
gttctgatggggaccaaagcaaacttagtaactccaagaaatggagagcctctcattgct
gctatacaagattttcttacaggtgcctatctgcttacactaaaagacaccttttttgat
agagccaaagcctgtcaaattattgcttctatcctggttggcaaggatgagaagattaaa
gttcgccttccacccccagcaatcctaaagcctgtaaccctctggacaggaaagcaggtc
ttcagcctcattctcaaacctagtgatgactgtcctgtaaaagccaacctccggaccaag
ggcaaacagtattgtggcaaaggggaagacttgtgtactaatgattcttatgttacaatc
cacaatagtgagctgatgagtggcagcatggacaaaggaactttaggatctggatccaag
aacaatatcttttacattttgctgagggactggggtcaggtagaagctgcagatgctatg
tcacgattagccaggcttgcacctgtctatctctctaatcgtggattctcaattgggatt
ggtgatgtcaccccaggccagggactgctaaaagccaaatatgaacttctgaatgctggc
tataagaaatgtgatgaatacattgaagctttaaacactggcaaactgcagcagcagcct
ggctgtactgcggaagaaaccttagaggctttaattcttaaagagctctctgttatcaga
gaccatgctggcagtgcctgtctcagagaattggacaagagtaacagtccccttatcatg
gctctctgtggttctaaaggttcctttattaatatatcccagatgattgcctgtgtaggg
cagcaggctatcagtgggtcacgagtgcctgatggatttgaaaatcggtctctacctcac
tttgagaagcattccaagcttccagcagcaaaaggttttgttgccaatagtttctattct
ggcctgactcctacagagtttttcttccacaccatggctggtcgggaaggtcttgttgat
acagctgtaaaaacagccgaaactggatatatgcagaggcggctggtgaaatcacttgag
gatctttgctctcagtatgacctgactgttagaagctctactggtgacattgttcagttc
atttacggaggagatggtttagatccagcagccatggaagggaaggatgagcccttggag
ttcaaacgggttctggacaatatcagagcggtttatccatgtcagagtgaaccagctctt
agtaaaaatgaattggtattaactgctgagtccatcatgaaaaagaatgaattcctctgc
tgccaagacagttttttacaggagattaaaaaattcctcaaaagtatttctgaaaagatc
aagaaaaccagggacaagtatggtattaatgacaatggcacaacagagccacgtgttttg
taccaattggatcgaattaccccaacacaactagagaagtttctagagacttgtagagac
aaatatatgagggcacagatggagcctgggtctgcagttggagcactatgtgctcagagt
attggtgagcctggcacacagatgaccctgaagactttccactttgctggtgttgcttcc
atgaacatcactctgggtgtaccacgaatcaaagaaattattaatgcctccaaagcaatt
agcacacctattatcacagcacagttggatatagatgatgattcagattttgcccgtctg
gttaagggaagaattgagaaaaccttattaggagagatatcagagtacatcgaagaagtg
tttcttccagatgactgctttattctggtcaagctgtctttggagcggatcagattgctg
agactagaggtgaacgcagagactgtacgatactctatttgcatatcaaagctaagagta
aagccaggagatgttgctgttcatggagaggcagttgtgtgtgtgacccctcgtgagaac
agcaagagttcaatgtattatgtcttgcagtccctgaaagaagagctgccaaagattgta
gtgcagggtatcccagaggtgtctcgagctgtcattcacattgatgaacagagtggaaag
cagaaatacaagcttctggtggaaggtgataacctacgagctgtcatggccacccatgga
gtcaaaggaactaagacaacatctaataatacttatgaggttgaaaaaacactgggcatt
gaagctgctcgatctactattatcaatgagattcagtacactatggtaaaccatggtatg
agcattgataggaggcatgttatgctgctctcggatctgatgacatacaagggtgaagtc
cttggcattactaggtttgggttagcaaagatgaaggaaagcgtgctaatgctggcatct
tttgaaaagactgcagaccatctctttgatgctgcctactttggacagaaagattctgtg
tgtggtgtttcagaatgcatcatcatggggattccgatgaatatcggaactggacttttc
aaactgctgcacaaagcagacaaagaatcaactcctcctaccaggcctctgatctttgat
agcaatgaattccatattcccattatcgcatag
DBGET
integrated database retrieval system
