Gavialis gangeticus (Gharial): 109287377
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Entry
109287377 CDS
T07453
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04510
Focal adhesion
ggn04520
Adherens junction
ggn04810
Regulation of actin cytoskeleton
ggn04820
Cytoskeleton in muscle cells
ggn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109287377 (VCL)
04520 Adherens junction
109287377 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109287377 (VCL)
04810 Regulation of actin cytoskeleton
109287377 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109287377 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ggn04812
]
109287377 (VCL)
04147 Exosome [BR:
ggn04147
]
109287377 (VCL)
Cytoskeleton proteins [BR:
ggn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109287377 (VCL)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109287377 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
109287377
NCBI-ProteinID:
XP_019357930
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPAGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGGTPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKIAE
LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNKV
VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVEQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRDEVFGERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccatacccgcaccatcgagagcatcctggagcccgtggcgcagcagatc
tcgcacctggtcatcatgcacgaggagggcgaggtggacggcaaggccatcccggacctc
accgccccggtggccgctgtgcaggccgccgtcagcaacctggtccgggttggaaaagag
actgtgcagacaactgaagaccagatcttgaaaagggacatgccaccagcatttatcaag
gtggagaatgcctgcactaaacttgtccaagcagcccagatgctacaagcagatccttat
tcagtacctgctcgtgattatctcattgatggatcaagaggcatactttctggaacatca
gacttgctcctgacttttgatgaggctgaggtccgtaaaatcatccgtgtctgcaaggga
attttggaatatctaactgtggcagaggtggtggagactatggaggatttagtgacatac
acaaagaatttggggccaggaatgacaaaaatggcaaaaatgattgatgaaagacagcag
gaattgactcatcaggagcacagagtcatgttggtgaattccatgaacactgtgaaggag
ctattgccagtccttatttcagctatgaagatttttgtaactactaaaaattctaaaagc
caagggatagaagaggctttgaaaaaccgtaacttcacagtagagaagatgagtgccgag
ataaatgaaatcatccgtgtgttgcaactcacttcctgggatgaggatgcctgggctagc
aaggacactgaagccatgaagagagctttggccttaatcgattccaaaatgaaccaggca
aaaggatggctaagggatcctaatgcaccagcaggtgatgctggtgagcaagcaataagg
caaatccttgatgaagctggaaaagtgggagaactgtgtgcaggcaaagagcgcagagag
attctgggaacctgtaaaatgctgggccagatgactgatcaagtagctgatctccgagcc
agaggacaaggtggtacaccaatggccatgcagaaagcacagcaagtgtctcaaggtctg
gatttgttgacagcaaaagtggaaaatgcagcccgtaaactggaggccatgactaactct
aagcaggcaattgctaaaaaaatagatgctgctcagaactggcttgcagatcctaatggg
ggcagtgaaggagaagaacatattcgcggaattatggctgaagccaggaaaattgcagaa
ctttgtgaggaacccaaggaaagagatgacattttgcgttccttgggggaaatctctgct
cttactgccaagctgtcagatctacgaagacatgggaaaggagactctccagaggcccgt
gcattggctaagcagatagccacatcattgcagaacttacagtctaaaactaacaaagtt
gtagcaaatactaggccagttaaggctgcagtccatttggagggcaagattgaacaagct
caaaggtggattgacaatccgacagttgatgatcgtggagtaggccaggctgcaatccgg
ggactggttgctgaaggtcgtcgtttagccaatgttatgatgggaccctatcgccaagat
ctgcttgccaaatgtgaccgtgtagaacagctggctgcccagcttgctgatctggcagct
agaggagaaggagagtctcctcaggcaagggccattgctgcacaactccaggactccttg
aaggatctgaaaacaaggatgcaggaagcaatgactcaggaagtttctgatgtcttcagt
gacactacaactcctattaaactattggcagtggcagccacagcacctcctgatgcaccc
aatagagatgaggtatttggtgaaagagcagcaaactttgaaaaccatgctgctagactt
ggagctacagcagaaaaagcagctgctgtgggaactgctaataaaactactgtggaaggc
attcaagcaactgtgaagtcagcgagagaacttacacctcaggtagtatcagctgctcgt
attctgctaagaaatcctggcaatcaagctgcttatgaacattttgagaccatgaaaaat
caatggattgataatgtggaaaaaatgacagggttggtggatgaagcaattgataccaag
tctctgttggatgcatcagaagaagccatcaagaaagaccttgataaatgtaaagttgca
atggctaatatccaacctcagatgctcgtagctggtgccaccagcattgctcggagggcc
aatcggatcttactggtagcaaaacgggaggttgaaaattcggaggatcccaaattccgg
gaagctgttaaggcagcctctgatgacctcagcaaaactatatcgccaatggtaatggat
gctaaagctgtagcggggaacatttctgatccgggcttgcagaagagctttctggattct
ggatataggattctgggagctgtagcaaaagtcagggaagccttccagcctcaagaacct
gatttcccccctcctccaccagaccttgagcagcttcatctaactgatgaacttgctcct
ccgaaaccaccccttcctgagggtgaagttcccccacccagaccacctcctccagaagag
aaggatgaagagttcccagagcagaaggctggagaagtgattaatcaacccatgatgatg
gctgctaggcagctacatgatgaagcccgaaaatggtccagcaagggtaatgacatcatt
gctgctgccaaaagaatggctctgctaatggcagagatgtcccgcctcgtgagaggtggc
agtgggacaaagcgtgcccttattcagtgtgcgaaggatattgcaaaagcatcagatgaa
gtaactcggttggccaaggaggtggcaaagcagtgcactgacaaacgtattagaaccaac
ctcttgcaggtctgtgagcgaatcccaaccatcagcacacaactcaaaatcctctctact
gtcaaagctaccatgctgggaagaactaacatcagtgatgaagagtcagaacaggctact
gaaatgttggttcataatgcccagaaccttatgcaatctgtaaaggagaccgtgagagaa
gcagaagcagcatctattaagattagaacagatgctggattcacccttcgctgggttaga
aagactccctggtatcagtaa
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