Gavialis gangeticus (Gharial): 109287402
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Entry
109287402 CDS
T07453
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109287402 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
109287402 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109287402 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109287402
NCBI-ProteinID:
XP_019358023
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MSTHRVALQGPGPWGFRLVGGKDFEQPLTVSRVTPGSKAAIASLCIGDVIMAIDGVNTDN
MTHLEAQNKIKACTDEINLTVGRSESKIWSPLVTEEGKTNPYKMNLASQPQRPKQFQRAF
SMTCQPLKSPSGPNSHSSPTVALKAPFASVYNPLQPQASASPLQRRHSTSSIPSQVRVGP
ERLKQAAQICPNSPVEVEVPGLKVLHVQFNSPLQLYSQENILDTLQGQISSISPTFLSLD
QPHQPSSNIVIDKESEVYKMLQENQEANEPPRQSASFLVLQEILESEETGDASKPSGFRS
VKPPTTKVASSIGNAQKLPVCDKCGSGIVGVFVKLRDKHRHPECYVCSDCGTNLKHKGHF
FVEDCIYCEKHARERVTPPEGYEVVTVFPK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaccgcgtcgccctgcagggcccggggccgtggggcttccgcctggtgggg
ggcaaggacttcgagcagccgctcaccgtgtcccgggtgactcctgggagcaaagctgca
atagccagtttatgcataggagatgtcatcatggcaattgatggagtgaacacagacaat
atgacacacttagaagcacagaacaaaattaaggcctgcacagatgagataaatctgaca
gttggaagaagtgaatccaaaatctggtcacctcttgtgacagaggagggaaaaaccaat
ccatataaaatgaatctggcctctcagccccagagaccgaagcagtttcagcgtgcattc
agcatgacatgccaacccttaaaatcgccctctggcccaaacagccattcatcacctaca
gtcgcgctgaaggctcccttcgcatcagtctataaccctctacagccgcaggcctctgca
tctccattgcagcggaggcacagcacctcctccatcccaagccaagtccgagtggggcct
gaacggctgaagcaagccgcccaaatctgccccaacagccctgtggaagtggaggtgcca
ggactcaaagtgctgcatgtgcagtttaattctcccctgcagctctattcacaggaaaac
atcctggatactttacaagggcagatctcttccattagcccgacttttctcagcttagac
caacctcatcagccatcaagtaacattgtcatagacaaggagtcagaggtgtacaagatg
ctgcaggagaaccaagaggcaaatgaaccacccagacaatctgcttccttcctggtattg
caagaaattttggaatctgaagagacaggagacgcaagtaaaccttctggctttagaagc
gtgaaaccccccacgaccaaagtggcctcctccattgggaatgcccagaagttgcccgta
tgtgacaagtgtggatctggcattgtgggcgtgtttgtgaagctccgggacaagcaccgt
cacccggagtgctacgtgtgcagcgactgtggaacaaacctcaagcacaaaggacacttc
tttgtggaagattgcatctactgcgagaagcatgcccgggagagggtgactccccctgag
ggctatgaagtggtcactgtcttcccaaagtga
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