Gavialis gangeticus (Gharial): 109287418
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Entry
109287418 CDS
T07453
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04010
MAPK signaling pathway
ggn04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109287418 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109287418 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109287418 (NFKB2)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109287418 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109287418
NCBI-ProteinID:
XP_019358049
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MVEHKEPLMETAEGPYLLIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKIC
NYVGLARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCIVTVGPKDMTAQFNNLGVLHVTK
KNMMEIMKEKLKQQKLRNRNQLLTDSEVREIEVEAKELKKVMDLSIVRLRFTAYLRDSSG
NFTLALNPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFY
EDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQF
TYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGPGGGTGGFGSGGGGNLSYPYAPGLA
YNSIYSSGPHPMGSYQGGVQMARASKMEEEGAERQLPAEQSYSQALQYHAQLCNMRILAL
TQRNAHALLDYSVTADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLVEVISG
IPNQQIINVANHLQQTPLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQAGDE
EVLKMLLAHLGAAALSLLSTPNYHGLLPVHVAVQVKSLACLELLVRKGADVNAAERQGGR
TPLHLAVEMDNLNMAAHLVKKLGADINARTFAGNTPLHLAAGLGSPTLTKMLIKSGADIL
CENDEPVSPSPSSSEASSDVDTDPEEQEGHMDLGEADTAMLQDMDDMDLGVTAGKRSKEA
GASGAKLRRRHTPLDLTRSQKVREILLRASQQGPESELPAVSRPGNILSLDSEILQGLEL
LLNQNRGGSDWTELAKRLGLCSLVETFKDTASPSRSLLLSYELSGGSLSSLLEALDSMGL
SEGVRMLRKAETYNKLQTTELKEDSAYGSQSVEEEQSSALTPKLCPPASAELPSPLAHNQ
QQQVH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcacaaggagccgctgatggagacagccgaaggtccgtatcttctcatcatt
gagcagccaaaacagcgcgggttccggttccgatacggctgtgaaggcccttcccatggt
gggctgcctggagcgtctagcgagaagggacgcaagacttaccccacagtcaagatctgc
aactatgtaggcctggcacggattgaagtggacctggtgacccacagtgaccccccacgt
gtgcatgcccacagcctggtggggaagcagtgcaatgaagctggcaattgcattgtgact
gtagggcccaaggacatgacagcacagttcaacaacctcggggtgctccatgtgaccaag
aagaacatgatggagatcatgaaggagaagctgaagcagcagaagttgcgtaacagaaat
cagctgctgacagattctgaggtgcgagagattgaggtggaggcaaaggagctaaagaag
gtgatggatctgagcatcgtgcgtctccgcttcaccgcctacctccgtgacagcagtggg
aacttcaccctggccctgaaccctgtcatctcggacccaattcatgacagcaagtcacct
ggggcatccaacctgaagatctcacggatggataagacagctggctcagtgcggggtggg
gatgaggtctacttgctgtgtgataaagtccagaaagatgacatagaggtgcgattctat
gaggacgatgagaacggctggcaggcttttggcgacttctcccctacagatgtgcataag
cagtatgccatcgtcttccgcacgccgccctaccacaagcccaagatcgaccgtcctgtc
actgtcttcttgcagctgaagcggaagcgagggggagatgtgagcgactccaagcagttc
acctactacccagtggtggaagacaaggaggaggtggagaggaagcggaaaaaggtgctg
cctcagttccctcagcactttggtgggggctcacacatgggtggacccggcggaggcact
ggtgggtttggatcgggtggaggtgggaatctaagctacccctatgcccccgggctggct
tacaacagcatctactcatcaggcccccaccccatgggcagctaccagggtggggtgcag
atggccagagccagcaagatggaggaggaaggtgctgagaggcaactgccagcagagcag
agttacagccaggccctgcagtaccatgcccagctgtgtaacatgcggatactggcactg
acacagcgcaatgcccatgccctgctggactactcagtcactgccgacccgcgcatgctg
ctggctgttcagaggcacctggcagcctctcaggatgagaatggagacacgcctttgcac
ctcgccattatccacgagcagacggctgtgattaagcagctggtggaggtcatcagtggt
atccccaaccaacagatcatcaatgtggccaaccacttgcagcagactcccctgcatctg
gccgtgatcaccaagcagccacaggtggtgcagttactgctgcaggctcatgcagacccc
actctgctggatcgctatggcaactcgctgctgcacctggcactccaggcgggtgatgag
gaggtgcttaagatgctgctggcacatctgggtgctgctgccctctctttgctcagtaca
cccaattaccatgggctgctccctgtgcatgtggctgtgcaagtgaagagcttggcttgc
ctggagctgctggtccggaaaggagctgacgtgaatgctgccgagcggcagggtgggcgg
acacctctgcatctggctgtggagatggacaacctcaacatggctgcccacctggtgaag
aagctgggagcagatatcaatgcccggacatttgctgggaacactcctctgcatctggct
gcaggcctgggctctcccacccttaccaaaatgctcatcaaatcaggggcagacattctg
tgtgagaatgatgagccagtgagtcccagtccctcctcctctgaagcaagcagtgatgtg
gacacagaccctgaggagcaggagggacacatggatctgggagaggcagatactgccatg
ctgcaggatatggatgacatggaccttggtgttactgctgggaagaggagcaaggaggct
ggtgccagtggggcaaagctgcgccggagacacacaccgctcgacttaacccggagtcag
aaggtgcgggagatattgctgcgtgcctcacagcagggcccagagtcagagctgcctgcg
gtgtccaggccagggaacatcctgtccctcgacagtgagatcctgcagggactggagctg
ctactgaatcagaatcgtgggggctcggactggactgagctggccaagaggctggggctc
tgcagcctggtggagaccttcaaggacacagcctcccccagcaggagcctcctgctcagc
tatgagctctccggtggcagtctgagcagcttactggaagcgctggactccatggggctc
agcgagggtgtgaggatgttgcgtaaggctgagacatacaacaagctgcagaccacagag
ctcaaggaggacagtgcctatgggagccagtcggtggaggaggagcaatcgtcagcccta
acccctaaactgtgcccgccagcctctgccgagctgccaagcccactcgcccacaaccaa
cagcagcaggtgcactga
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