Gavialis gangeticus (Gharial): 109287501
Help
Entry
109287501 CDS
T07453
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109287501 (MYOF)
Membrane trafficking [BR:
ggn04131
]
Endosome - Lysosome transport
Others
Ferlins
109287501 (MYOF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Motif
Other DBs
NCBI-GeneID:
109287501
NCBI-ProteinID:
XP_019358170
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MKVSMFVLGAGDEPPVEKRERDNENDDVESNLLLPAGIALRWVTFLLKIYRAEDIPQMDD
AFAQTVKEIFGGEADKKNLVDPFVEVCFAGKKVCTNIVEKNANPEWNQVVHLQIKFPSMC
EKIRLTVFDWDRLTKNDVVGTTYLRLSKIAASGGEVDEFSSSGAGSSSYEVSTGETEVGF
LPTFGPCYLNLYGSPREYTGFLDPYDELNSGKGEGVAYRGRILVELSTVLENNPVNKKIE
VLPSDDILVVEKYQRRRKYSLAAVFHSATMLQDTGEPIQFEVSIGNYGNKFDTTCKPLAS
TTQYSRAVFDGNYYYYLPWARTKPVVTLTSFWEDISHRLDPVNIILTMVERLQSNIAALK
SGMQAKISENQLAEIWLKLIDELVEDTSKPFPHIEGRSNVTILDTQIQKLRLRSLKQIQE
AATRMRIEATDVKVTLPEIEDWLDKLVQLSEESQNSMPDVIIWMIRGEKRLAYARIPAHQ
VLYSTTSPESSGKHCGKTQTIFLKYPQDKTKDVKIPVELRVNIWLGLTAVEKKFNSFAEG
TFSVFAEMYENQAFMFGKWGTSGLVGRHKFSDVTGKIKLKREYFLPPKGWEWEGDWTVDP
ERSLLTEADAGHTEFTDEVYENESRYPGGEWKPSEESYTDVNGEKAAPPRELTCPPGWIW
EDDGWTPDLNRAVDENGWEYGITIPPDSKPKSWVAAEKMYHTHRRRRLVRKRKKDPNQAA
AARGVVSYEDQEGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMAPSETHGSAAIFKLEGA
LGADTSTEDGEGRSSDKAKDSATRVFGANTPIVSCTFDNVYSYHLRCYVYQARNLIALDK
DSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTLIFNEIEIYGNPQTVAQNPPDVVIELF
DNDQVGKDEFLGRSICSPVVKLNPEVDITPKLLWYPVINNGKASGDILFAAELILRAKDG
SNLPILPSQRAPKLYMVPQGVRPVVQLTAVEILAWGLRNMKNYQVAPVTSPSLVVECGGE
MVESVVIKNLKKTPNFPGSVLFMKVLLPKEELYTPSLVIKVIDHRAFGRKPVVGQCTIDQ
LENFRCDPYATIADIAPQQKVSLLAAAPRRDFVIEVEDTQPLLAAQCLSSMSTALSKLAS
PSTVHLMEKEEEIVDWWSKFYASIGEREKCGQYIQKGYDTLKVYHCELENVPEFNGLTDF
CDTFKLYRGKSEDNDDPSVVGEFKGSFKIYPLPDDPTIPSPPRQFRELPDSGPQECIVRI
YIVRALDLQPQDNNGLCDPYMKISLGKKVIEDRDHYVPNTLNPIFGRMYELSCFLPQEKD
LKISVYDYDMLTRDEKVGETTIDLENRFLSRYGSHCGIPQQYCISGVNNWRDQQKPTQLL
QNTARFKGYPPPVYSENGSRINYGGQDYTLDEFEANKKLHQHLGPGDERLALHILRTQGL
VPEHVETRTLYSTFQPNISQGKIQMWVDVFPKSLGPPGPPFNITPRKAKKYILRVIIWNT
KDVVLDERSITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFDYFPA
EQLCMISKKEHFWSLDNTEFRIPPKLIIQIWDNDKFSLDDYLGFVELDLHNTIIPAKVSE
KCTIDMIPEYKATNSHNAPKTASLFEQKSMKGWWPCYVEKDGSRVLAGKVEMTLEVINEK
EAEEKPAGKGRDEPNMNPKLDMPNRPETSFLWFTNPCKTMKFIVWRRFKWVFIGIIILLI
LLLFVAILLYSLPNYISMKIVKPL
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagcatgttcgtcctgggagcaggagatgagccaccagtggaaaaaagggaa
cgagataatgaaaatgatgatgtggaaagtaaccttttactaccagctggcattgcactt
cgatgggtcacttttcttcttaaaatctacagagctgaggacattccccagatggatgat
gcttttgcacagacggtcaaggaaatatttggaggagaagcagacaagaaaaatcttgta
gatccatttgtggaagtttgttttgcgggaaagaaggtttgcacaaatatagttgagaaa
aatgctaatccagaatggaatcaagttgttcatcttcaaatcaagtttccctcaatgtgt
gaaaaaataagactaacagtgtttgactgggatcgtcttaccaagaatgatgtagtagga
acaacatatttaaggctctccaaaattgctgcttctggtggagaagttgatgagttttca
tcttcgggagctgggtcttcatcatatgaagtaagtacaggtgaaacagaagtgggcttt
ttaccaacatttgggccctgttacctaaacctgtatggaagcccaagagaatatacagga
ttcctggacccgtatgatgaactaaactctggaaagggggaaggagtggcttacagaggc
agaatcctagttgaattatctacagtacttgaaaacaaccctgttaataaaaaaatagag
gtgttacccagtgatgacatactggttgttgagaaatatcagcgtagacgaaagtacagt
ctggctgctgtatttcattctgccaccatgctgcaagatactggtgagcctatccagttt
gaagttagcatcggtaattatggcaacaagtttgataccacatgtaagcctctagcatca
acaactcagtacagtcgtgcagtatttgatggtaactattattattacctgccttgggca
cgcacaaagccagtagtgacactgacttccttttgggaggacataagccacagactggac
ccagtgaacataatcctaaccatggttgaaagactgcaatccaacatagctgccttaaaa
tctggaatgcaggctaaaatttctgaaaaccagttggctgaaatatggctaaagctgatt
gatgaattggtagaagatacaagtaaaccattcccccacatagaaggtagatccaatgtc
acaattcttgacacacagatccaaaaactacgcctcagatctctaaaacaaattcaagag
gcagcaacgaggatgagaattgaagctacagatgtgaaggtcactttaccagaaattgaa
gattggttggataaattagtgcagctaagtgaagagtcacaaaacagcatgcctgatgta
atcatctggatgattcgaggggagaagagacttgcctatgcccgcattcctgcacaccag
gttttgtattctaccacaagtcctgaatcttctggtaaacactgtggaaagacccaaacc
atctttttaaagtatccacaggacaagacaaaagatgtaaaaattccagtggagttacga
gttaacatatggcttgggctgactgcagttgagaagaaattcaatagctttgcagaaggc
acatttagtgtatttgcagaaatgtatgaaaatcaggcatttatgtttggaaaatggggg
acctctggacttgttggtcgccacaaattttctgatgtcacaggaaaaatcaaattaaaa
agagagtactttctgcccccaaagggctgggagtgggaaggagactggacagttgatcca
gaaaggagcttgctgactgaagctgatgctggtcatactgaattcactgatgaagtgtat
gaaaatgagagtcgctacccaggaggagaatggaaaccatctgaagagagttacacagat
gtgaatggagaaaaagctgcaccacctcgtgaattaacctgtcctcctggatggatctgg
gaagatgatggctggacacctgatttaaatcgagcagtggatgagaatggatgggaatat
ggaattactattcctccagacagtaagccaaagtcctgggttgctgctgaaaaaatgtat
catactcacagacggcgaagactagtgcgaaaacgcaagaaggatccaaaccaagcagca
gcagcaaggggagtggtgtcctatgaagatcaagaaggatgggagtatgcatctttgatt
ggctggaaatttcattggaaacaacgcagttctgatactttccgtcgtagacgctggagg
agaaaaatggctccttcggagactcatggttcagcagctatcttcaaacttgaaggtgct
ctgggggcagacacaagtactgaagatggagaaggaaggagttcagacaaggccaaagac
agtgctaccagggtatttggggccaacactccaattgtttcctgcacctttgacaatgtg
tatagttaccaccttcgctgctatgtgtatcaggcaagaaatctcattgctttagacaaa
gacagcttttcagatccatatgctcatgttagtttcctccatcgaagcaagacaacagag
attatccattcaactctaaatcctacatgggaccaaactcttatatttaatgaaattgaa
atatatggaaatccacagacagtagcacaaaacccacctgatgtggttattgaactcttt
gacaatgaccaagtgggtaaagatgaatttctaggaagaagtatttgctccccagtggta
aaattaaacccagaagtggatatcacccctaaacttctctggtatcctgtgataaataat
ggcaaggcttctggggacatcctttttgctgctgaacttattctgagggctaaggatggc
tccaatcttccaattcttccatcacaaagagcaccaaagctctacatggtcccccaagga
gtcaggcctgtggttcagcttactgctgttgagattcttgcctggggcttacgaaacatg
aaaaactaccaagtggctcctgttacttctccaagcctcgttgtggagtgcgggggtgaa
atggtggagtctgtggtgatcaaaaacctcaaaaagacaccgaattttccaggctctgtt
ctctttatgaaagtgcttttgcccaaggaggagctgtacaccccatcactagttattaaa
gtgattgatcacagggcatttggacgaaaacctgttgttgggcagtgtactattgatcaa
ctggaaaactttcgctgtgacccttatgctactatagcagatattgcaccacaacaaaaa
gttagtctcctggctgctgcacctcgccgagattttgtcattgaagtggaagacacgcaa
ccactgctagcagctcagtgtttaagcagtatgtcaacagcactcagcaaattggcttct
ccatcaacagtgcatcttatggaaaaggaggaagaaattgttgactggtggagcaaattt
tatgcttcaattggagagcgtgaaaaatgtggacagtatattcaaaaaggatatgacaca
ttaaaggtataccattgtgagttagagaatgtacctgaatttaatggcttgacagacttt
tgtgatacattcaagctgtacagaggtaaatctgaggacaatgatgatccttcagtggta
ggggaatttaagggctcctttaaaatctacccgttaccagatgaccctactataccatct
cctcctcgtcagttccgtgagttaccagacagtggacctcaggaatgtattgtgcgaatt
tacattgttagagccttggatctccaaccccaggacaacaatgggctgtgtgatccttat
atgaaaatatccttaggtaaaaaggtgattgaagacagagatcattatgtacccaatact
ctcaacccaatttttggcagaatgtatgaactcagctgcttcttgcctcaagaaaaggat
ctgaaaatttcagtctacgactatgatatgttgactcgtgatgaaaaagttggtgaaacc
accattgatcttgagaataggtttctctctcggtacgggtcccattgtggcataccacag
cagtattgcatttcaggtgtaaataactggcgagatcaacagaaaccaactcaactgctg
cagaacacagccaggtttaaaggttaccctccccctgtctactcagaaaatggtagcaga
attaattatggagggcaagactacaccttggatgaatttgaggctaacaaaaaactgcac
cagcatctagggccaggggatgagcgtctagcgcttcatatccttagaactcagggcttg
gtacctgaacacgtggagacaaggaccttgtacagcaccttccagcccaacatctcccag
ggaaagattcagatgtgggtagatgtttttcccaaaagcttgggacctcctggcccacct
ttcaacatcactccccgcaaagcaaagaagtacatcctgcgggtaattatttggaacacc
aaagatgttgtgctggatgaaagaagtatcacaggggaagaaatgagtgacatctatgtg
aaaggatggatgcctggcaatgaagaaaataagcagaaaacagatgtgcattacaggtca
ctggatggtgaagggaattttaactggagatttgtttttccttttgactactttccagct
gagcaactctgtatgatttctaaaaaggaacatttttggagtcttgacaatacagaattc
agaatcccacccaaactaattattcagatatgggataatgacaagttctccttggatgac
tatttgggttttgttgagcttgatttgcataacacaattattccagcaaaagtctcagag
aagtgcactatcgacatgattccagaatacaaggcaaccaactctcacaacgctcccaag
actgcttcactctttgaacagaaatccatgaaagggtggtggccatgttatgtggaaaag
gatggttcacgtgttttggctggtaaagtggagatgactctggaagtcatcaatgaaaaa
gaggctgaagaaaagccagctggtaaaggaagagatgaacccaacatgaaccccaaatta
gacatgccaaatcgaccagaaacctccttcctttggttcacaaacccatgtaagactatg
aaatttatagtgtggcgcagatttaaatgggtcttcataggcattatcatcctgctgatt
ctgctcttgtttgtggcaatccttctatattccctgccgaattatatttcaatgaagatc
gtgaaaccgctttaa
DBGET
integrated database retrieval system
