Gavialis gangeticus (Gharial): 109287546
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Entry
109287546 CDS
T07453
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04114
Oocyte meiosis
ggn04120
Ubiquitin mediated proteolysis
ggn04218
Cellular senescence
ggn04310
Wnt signaling pathway
ggn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109287546 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109287546 (BTRC)
04340 Hedgehog signaling pathway
109287546 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
109287546 (BTRC)
04218 Cellular senescence
109287546 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109287546 (BTRC)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109287546 (BTRC)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109287546 (BTRC)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109287546 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
F-box
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
Beta-prop_VPS8
F-box_5
DUF4508
Motif
Other DBs
NCBI-GeneID:
109287546
NCBI-ProteinID:
XP_019358253
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MPKDGFQLTSSGYQAWLKQCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSER
EDCSNDEPPRKIIPEKNSLRQASAEGSIHPVSNVQPPEVGVVTRRAASHRIRGPWALVDL
AAGGKRTYNSCARLCLNQETVCLGSTAMKTENCVAKTKLANGTSSMIVPKQRKLSASYEK
EKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHI
AENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYL
FKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYD
DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT
GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV
DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD
IECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV
EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAESTRSPSRTYTYISR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagacggattccaacttacatcttctggataccaagcatggctaaagcagtgc
tctatgcccagatctctgtggctgggctgctccagcctggcggacagcatgccctcgctg
cgatgcctgtataacccagggactggcgcactcacagctttccagaattcctctgagaga
gaagactgtagtaatgacgagccccctaggaagatcattccagagaagaattcacttaga
caggcctcagcagaagggtctattcatcccgtatcaaatgtacagccaccagaagttggg
gttgtgactaggagagcagccagccacagaatccggggcccttgggctctggtggacctg
gcagctggtggcaagaggacctacaacagctgtgccagactgtgcttaaaccaggaaacc
gtgtgtctaggaagcaccgcaatgaagacggaaaactgcgtggccaaaacaaaacttgcc
aatggcacttccagtatgattgtgcccaagcaaaggaagctgtccgcgagctatgagaag
gagaaggagctctgtgtcaagtattttgagcagtggtctgagtccgaccaggtggagttt
gtggagcatctcatctcgcagatgtgtcattaccaacatggacatatcaactcgtacctc
aagcccatgttacagagggacttcatcacagcgctaccagctcggggattggatcacatc
gccgagaacatcctgtcgtacctggatgccaagtcgttatgtgccgccgagctggtgtgt
aaggagtggtaccgagtgacatccgacggcatgctgtggaagaagcttatcgagcgaatg
gtcaggacggactcgctatggagggggttggcggagaggagaggatggggacagtatcta
tttaaaaacaagcctcccgatggcaatgccccacccaactccttctatagagcactttat
cccaaaattatacaggacatagagacgatcgagtccaactggcggtgcggaaggcacagt
ttacagagaatccactgtcggagcgaaaccagtaaaggggtttattgtttacagtacgac
gatcagaagatagtcagtggcctccgtgacaataccatcaagatctgggataagaatacg
ctggaatgcaagcgcatcctgaccggacacacgggttctgtgctgtgcctgcagtatgat
gagcgggtgatcattactggctcctcggactcgaccgtcagggtatgggatgtcaataca
ggcgagatgctgaacacactgattcaccactgcgaagcagtgctgcacctgcgcttcaac
aacggcatgatggtgacgtgctccaaagaccggtccatcgccgtctgggatatggcgtct
ccaacagacattaccctgagaagggtcctggtcggacacagggccgccgtcaatgtagtg
gacttcgatgacaagtatattgtatcagcgtcgggtgataggactataaaggtctggaac
acgagtacctgcgaatttgtgcgcaccttaaatggacacaaacgaggcatcgcgtgcctg
caatacagagaccggctagtggtgagcggctcctccgataacaccatcaggttgtgggat
atcgagtgtggggcatgcttacgagtcctggaaggccacgaggagctggtgagatgcata
cgcttcgataacaagaggatagtcagcggagcgtacgacgggaaaattaaagtgtgggac
ctcgtggctgccctggaccctcgcgccccagcagggactctctgtctgcgaaccctcgtg
gagcattctgggagagtctttcgcctccagtttgacgagttccagatcgtcagcagctcg
cacgacgacacgatcctcatctgggacttcctgaatgacccggctgcccaagcagagtcg
acccgctccccctccagaacatacacctacatctccagataa
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