Gavialis gangeticus (Gharial): 109287548
Help
Entry
109287548 CDS
T07453
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03410
Base excision repair
ggn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109287548 (POLL)
03450 Non-homologous end-joining
109287548 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109287548 (POLL)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109287548 (POLL)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109287548 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109287548 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
BRCT
HHH_5
LIG3_BRCT
NTP_transf_2
HHH
Motif
Other DBs
NCBI-GeneID:
109287548
NCBI-ProteinID:
XP_019358261
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MLPTGIVKAFPKRKKAWDGAEQVPPKIEKEPEAGGPEVWLASVIAYVLPAGMGRARAEIF
HKHIVQHGGRVCSQPSPEVTHIIVNEGMDGGRALRLLRLAALPPSVRLVTAAWLSTCISE
RKLLSTAGYDVLVPDSPHMPSSAQLHVVGGRSLDAPERQTCQKSPLGNGDVQPQAPNEAL
GPEAEAQVDASGQLLAEETGPPAQRVSEDEGSDMEEPSVTPADLEALILGHCPPTPSEGS
AATSPPVGRWVCAQSSHTRKENHNQCITEKLEVLAKAYSIQGDKWRALGYAKAINALKSY
HKPITSYEEACKIPGIGKRMAEKIQEILASGHLRKLDHISESVPVLEVFSNIWGAGIKTA
QMWYQQGFRTLDEIRTKASLTSQQAIGLKHYEDFLERMPRAEAAEIEQTVREVAQALDPG
LVCVACGSYRRGKPSCGDVDVLVTHPDGRSHRGIFAKLLNSLWRSGFLTDDLVRQEDSGG
QKKYLGVCRLPGPGRHYRRLDIIVVPYAEFGCALLYFTGSAHFNRSMRALAKTKGMSLSE
HALSTAVVRGPRGAKVAPGFALPTPTERDVFAVLGLPYREPSERDW
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccaccggcattgtaaaagcctttcccaagaggaagaaggcatgggatggggcg
gagcaggtccccccaaagatcgagaaggagccggaggcggggggccctgaggtttggctg
gcgtctgtcattgcctatgtgctgccagcgggcatgggccgggccagggctgaaatcttc
cacaagcacatcgtgcagcatgggggccgtgtctgcagccagccctcgccagaggtgaca
cacatcattgtgaacgaaggcatggatggaggccgggcactgcggctcctgcgactggct
gcactgccccccagcgtacggctggtgacagccgcctggctgagcacgtgcatttccgag
cggaagctgctgagtactgctgggtacgacgtcttggtcccggacagtcctcacatgccc
agctctgctcagctccatgtggttggtggcaggtccctggatgcaccggagaggcagacc
tgccagaagtctcccctgggcaatggggatgtccagccccaggcaccaaatgaggccctg
gggccagaggctgaagcacaggtggacgcctcagggcagctgctagcagaggagacagga
cctccagcacagagagtctctgaggatgagggaagcgacatggaggagcccagtgtcacc
ccagctgacctggaggcactgattttggggcattgccccccaactccatctgaaggctct
gcagcaacctccccacctgtcggcaggtgggtctgtgctcagtcctcccacaccaggaag
gagaatcacaaccagtgcatcacagagaagctggaggtgctggcgaaagcctacagcatc
cagggagataagtggagggccctgggctatgccaaagccatcaatgccctcaagagctac
cacaagccgatcacgtcctacgaggaagcctgcaagatccctggcatcgggaagcggatg
gcagagaagatccaggagatcctggccagcgggcacctgcggaagctggaccacatcagc
gagagcgtgcctgtgctggaggtcttctccaacatctggggcgcaggtatcaagactgcc
cagatgtggtaccagcagggcttccgcacgctggatgagatccgcaccaaggcctccctc
accagtcagcaggccatcggcttgaagcactacgaggacttcctggagcgcatgcctcgt
gcagaggcagctgagatagagcagacggtgcgggaggtggcccaggccctggatcctgga
ctggtgtgcgtggcctgtggctcctatcgccgcggcaagcccagctgtggggacgtggat
gttctggtgacccaccccgatgggcgctctcatcgtggcatcttcgccaagctgctcaac
agcctctggcgcagtggcttcctcactgacgacctggtgaggcaggaggacagcggtggt
cagaagaaatacctgggcgtgtgtcggctgcccgggccaggtcggcactaccggcgcctg
gacatcatcgtggtgccctatgccgagtttggctgtgcccttctctacttcaccggctcg
gcccactttaaccgctccatgcgtgcactggccaagaccaagggcatgagcctgtcagag
cacgcgctcagcacggctgtggtccgcggccccaggggtgccaaggtggcacctggcttc
gccctgcctacccccactgaaagggatgtctttgccgtgctggggctgccctaccgtgag
ccgtctgagcgagactggtga
DBGET
integrated database retrieval system
