Gavialis gangeticus (Gharial): 109287612
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Entry
109287612 CDS
T07453
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ggn
Gavialis gangeticus (Gharial)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_5
LRR_13
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
109287612
NCBI-ProteinID:
XP_019358341
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSAKEREKEAKASGGLGKESKEKEPKTKGKDAKDGKKDSSSV
QPGVAFSVDNTIKRPNPAPGARKKSSNAELIKELNKCREENAIRLDLAKRSIHMLPSSIK
ELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPDSLDNLKKLAMLDLRHNK
LREIPSVVYRLCSLATLYLRFNRVTTVEKDIKNLSRLTTLSIRENKIKQLPAEIGELCNL
ATLDVAHNQLEHLPEEIGNCTQITKLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSSIP
KSFSKCSELEELNLENNNISTLPEGLLSSLVKMTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWISMVDLNLATNQLSKIPED
VSGLVSLEVLILSNNLLRKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaagactgtaaagagaaggatccaaaagtcccatct
gcaaaagagagagagaaggaggccaaggcgtctggagggcttgggaaagagagtaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaaaaaggactccagtagtgtt
cagcctggggtggctttttcagtggacaacacgataaaacgacctaatccagccccaggc
gctcgcaaaaaatccagcaatgctgagttgatcaaagagctaaataaatgccgggaagag
aatgcgattcgcttggacttagccaagaggtctatacacatgcttccatcgtctatcaaa
gagttgacacagctaacggaactttatttatatggtaacaaactgcagtccttaccgccc
gaggtgggctgtctcgtgaatctggtgacactggcactgagtgagaactcgcttaccagt
ttgcctgactctcttgataacttgaagaaattggccatgcttgacttgcggcataacaaa
cttagagaaattccttcggtggtgtacaggctatgttctctcgccactctttatctacgc
tttaatcgtgtaactactgtggaaaaggatatcaaaaacttgtcaagactcaccacgctt
agcatacgagagaacaaaattaagcaactacctgctgaaattggtgagttgtgtaacctt
gcaacgctggatgtagcgcacaatcagcttgaacatcttccagaggagattgggaattgc
acgcagatcaccaaacttgacttgcagcacaatgaactcttggacctgccagaaactata
ggaaacctgtctagtttaagtcgtcttggcctgaggtacaataggctgtcgtcaattccg
aagtcgttttcaaaatgcagtgaacttgaagaactgaatttggagaacaacaacatttct
actttaccagagggacttttatccagtcttgtgaagatgactagtttaacactagccagg
aattgcttccagtcgtaccctgtgggtggtccatcacaattctctacaatctactctctc
aacatggaacacaaccgcatcaataaaatcccctttggaattttctctagagcgaaagtg
ttaagcaagctgaacatgaaggacaatcagctgacctctcttcctttggactttggaact
tggattagtatggtagacctgaacttagccactaatcagctctcaaaaattcctgaggat
gtctctgggctggtttcccttgaggttcttatcttgtcaaacaatcttctaaggaaactt
ccccatggcattggaaatctgcggaaactgcgagaattggatctagaggagaacaaactg
gaatccttgccaaatgaaatagcttaccttaaggatctgcagaaactagttttgactaat
aatcagttgaccacccttccaagaggaattggtcaccttaccaatctgacgcatcttggg
cttggagagaatcttcttacacaccttcctgaagaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctacacagccttccttttgagctggctctctgc
agcaaactatcaataatgagcattgagaactgcccgctcagccaccttccgcctcagatc
gttgctgggggaccctcgttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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