Gavialis gangeticus (Gharial): 109287643
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Entry
109287643 CDS
T07453
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggn03016
]
109287643 (TRUB1)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
109287643 (TRUB1)
Transfer RNA biogenesis [BR:
ggn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109287643 (TRUB1)
Prokaryotic type
109287643 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
109287643
NCBI-ProteinID:
XP_019358427
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MASTSADKLFSLSGLFAVYKPKGPTSADLLNHLKAKLLAEAGVQEVVRKRKKPILKIGHG
GTLDSAASGVLVVGIGKGTKLLGSLLAGSKKYTAIGELGKATDTLDATGKVTEEKPYDQI
TKGDLEKVLQKFTGDIMQVPPLCSALKKDGQRLSCLMKKGVAVEAKPARPVSVYNLSLQN
FQPPLFTLDVECGGGFYVRSLVSDIGKELSSCASVRELTRTKHGPFTLEEHTLHEDKWTI
DEIARSLEHCMSLLPEEPSHKKLKTEHSEESAVSCEDKR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacgtcagcagataagctcttttcgctgagcggcctgtttgctgtgtacaag
cccaaggggcctacctcagctgatctgctcaaccatctgaaggccaagctgctggcagaa
gctggtgtacaagaggttgtcagaaaaaggaagaaaccgatcttgaagattggacacggt
gggactctggatagtgcagcttcaggagttctggtggttggtatcggaaaaggaacaaaa
ctgctcggaagtctgttggcaggttccaagaagtacacagccattggggagctaggaaaa
gctaccgacacattagatgccacaggaaaagtaacagaagaaaagccttatgatcaaata
acaaaaggagatcttgaaaaagtgctgcagaagttcacaggggacataatgcaagttcct
ccactctgttctgctttgaagaaagatggacaaaggctatcgtgtctcatgaagaaagga
gtagcagtggaagcaaagcccgctcggccggttagcgtttacaacctgtctctccagaac
ttccagccaccgctgttcacactggatgttgaatgtggcggtggcttttatgtcagaagc
ttggtcagtgacattggcaaagaactctcttcatgtgccagtgtgcgagagctgacccga
accaagcatgggccatttaccctagaggagcacacgcttcatgaagacaaatggacaatt
gatgaaattgcacggtccctagagcattgcatgtctcttctcccagaagaaccgtcacat
aaaaaattaaagactgagcattcggaagaatctgctgtgagctgtgaagataagcgataa
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