Gavialis gangeticus (Gharial): 109287901
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Entry
109287901 CDS
T07453
Symbol
DHX36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109287901 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109287901 (DHX36)
03012 Translation factors [BR:
ggn03012
]
109287901 (DHX36)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109287901 (DHX36)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109287901 (DHX36)
Translation factors [BR:
ggn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109287901 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
PhoH
AAA_23
NACHT
Sir1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109287901
NCBI-ProteinID:
XP_019358718
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MSYEHRRGWGRGRGGGGGGSSRPSSSEGGYGGRGGGGXXXXXGGGGGGGRGRHPGHLKGR
EIGLWYARKHGQRSKEADRQQRAVVQMDEHREEQIVQLLNTVQTRNEKEQEAMSWWSGEE
EGPDQVEQVKEKPTLEKVPIKHRPNLERTFLDRDAEFLFQKNEPDIDLDEQFREELRKKR
SDSRYIEMQRFREKLPSYGMRRELVNVINNNQVTVISGETGCGKTTQVTQFILDDYIERG
KGSACRIVCTQPRRISAISVAERVAAERAEVCGNGKSTGYQIRLQSRLPRKQGSILYCTT
GIVLQWLQSDKQLSSVSHVVLDEIHERNLQSDVLMTVIKDLLNIRSDLKVILMSATLNAE
KFSEYFDSCPMLHIPGFTFPVVEYLLEDVIEKLRYMPENTDRRPRWKKGFMQGHISRPEK
EEKEEIYRERWPDYLKQLQGRYSTSTIAALESVDDDKIDLDLIAALIRHIALEEEDGAIL
VFLPGWDNISTLHDLLMSQVMFKSDRFVIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATN
IAETSITIDDVVFVIDGGKIKETHFDTQNNISTLAAEWVSDANAKQRKGRAGRVQSGHCF
HLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAHFLSKLMDPPSHDAVMLSIN
HLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFV
IPLGKEKVADARRKELSKNTKSDHLTIVNAFTGWEEARRRGFRNEKDYCWEYFLSSNTLQ
MLHNMKGQFAEHLLAAGFVNSKDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSK
KRKMVKVCTKPDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLF
FGGDISIQKDNDQDTIAVDEWIVFQSPARIAQLVKNLRSELDDLLQEKIENPHPVDWNDT
KSRDTAVLTAIIDLITTQENESARNFAPRFQNEHYS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgcaggggatggggccgcggccgcggcgggggtggcggcgggagc
tcccggccttcctcctccgaggggggatacggaggccgcgggggcgggggnnnnnnnnnn
nnnnnngggggcgggggcggcggcggccggggacgacatcccgggcacctgaagggccgc
gagatcgggctgtggtacgcgcgcaagcacgggcagagaagcaaagaggccgataggcag
cagagagccgtggtgcaaatggatgaacatcgtgaagaacagattgtgcagctgttgaat
actgtccagactagaaacgaaaaagaacaagaagccatgtcctggtggtcaggcgaggaa
gaaggacctgatcaagtggagcaagtaaaagagaaaccaaccttggaaaaggttcctata
aaacatagaccaaacttggagagaacattcctagatcgggatgcagaatttctgtttcaa
aaaaatgagccagatattgatttagatgagcaatttagagaagaattaagaaagaagaga
tctgattcaagatacattgaaatgcagaggttccgagaaaaattgccttcgtacgggatg
agaagggaactggtaaacgtgataaataataatcaagtaactgtgataagtggtgagact
ggttgtggaaagaccacacaagtaactcagttcattctggatgactatattgagagagga
aaagggtctgcttgcaggattgtgtgcacacaaccaaggaggatcagtgccatctcagtt
gcagagagagttgctgctgaaagggcggaagtatgtggtaatgggaagagtacaggatac
caaattcgcttgcagagtcggttgccaaggaaacaaggctccattttgtactgtacaaca
ggaatcgtcttacagtggcttcaatcagacaagcagttgtccagtgttagtcatgttgtc
cttgatgaaatccatgaaaggaatcttcagtcagatgtcttaatgactgttattaaagat
ctcctaaatattcgatcagacctgaaagtaatactgatgagtgctactttgaatgcagag
aaattttcagaatattttgacagttgtcccatgcttcatatacctggattcacttttcct
gtagtggaatatcttttggaagatgtcattgaaaaattaaggtatatgccagaaaacaca
gatcgcagacctcgctggaaaaagggcttcatgcagggacacataagcagaccagaaaaa
gaagaaaaagaggaaatctatagagaacgttggccagattatctaaagcagcttcaagga
aggtattcaacaagtactatagctgctttggaatcggtggatgatgacaaaattgacctt
gacctcatagctgcactcatcagacacattgccttagaagaagaggatggtgcaatattg
gtgtttctcccaggctgggacaacattagcactttacatgatctcttgatgtcacaagtc
atgtttaaatcggataggtttgttatcatacctctccactctttgatgcctactgttaat
cagacgcaggtttttaaaaagacccctcctggagtacggaaaattgtaattgcaaccaac
atagcagagaccagcattaccatagatgatgttgtgtttgttattgatggaggaaaaata
aaagaaactcattttgacacgcagaacaacattagcaccctggcagctgagtgggttagt
gatgctaatgctaagcaaaggaaaggtcgagcaggaagagtccagagtggtcactgtttt
catctatacaatggtctacgtgccagtcttctagatgattatcagttaccagaaatcctg
aggacacctttggaagaactctgtctacaaatcaagattctaaagcttgggggaattgct
cattttctaagcaaactaatggatccaccatctcatgatgctgtaatgttgtccataaac
cacctaatggaactgaatgctttggatagacaagaggaactgactccactaggtgtccat
ttggcacgattgccagttgagccacatattggaaaaatgattctctttggagctttattc
tgttgcttagatccagtgctcacaattgcagccagtctcagcttcaaggatccctttgtc
attccactgggcaaagagaaagtagcagatgcaaggagaaaggaactctcaaagaacact
aaaagcgaccacctaaccattgtgaatgctttcacaggctgggaagaggctcggcggcgt
ggcttccgaaatgaaaaagactactgctgggagtattttctgtcttcaaatacactccag
atgctgcataatatgaaagggcagtttgctgaacatctcctagcagctgggtttgtgaat
agtaaagaccccaaagatccaaaatctaataccaactcagataatgagaagttgctcaag
gcagtcatctgtgctggtttatatccaaaagttgcaaagatccggccaagctttagcaag
aagagaaaaatggttaaagtttgtaccaagccagatggaactgttaacattcatcctaaa
tctgttaatgtggaagagactgagttccattataactggctcgtttatcatctgaagatg
agaaccagcagtatttacctctatgattgtacagaagtctctccatactgtctcttgttc
tttggaggagatatttccattcagaaggataacgatcaggatactattgctgtggatgaa
tggattgtctttcagtctcctgcaaggatagcccaactagtcaagaatttaagaagtgaa
ctagacgaccttctacaagagaaaattgaaaacccgcaccctgtggactggaatgacact
aaatccagggacacagcagtcctgacagccattatagacttaatcacaacacaagagaat
gaaagtgccagaaactttgctcctcgatttcagaacgaacattatagttga
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integrated database retrieval system
