Gavialis gangeticus (Gharial): 109287938
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Entry
109287938 CDS
T07453
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109287938 (SMC4)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
109287938 (SMC4)
Condensin II
109287938 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
APG6_N
ATG16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109287938
NCBI-ProteinID:
XP_019358769
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MPRKRTKTSTAACQKGKEPIEESTSDMEMGRDDAHLGKLSQQAALNEELANRSLEEILSS
ISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVID
SMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFC
VSRTAYRDNSSVYQISGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQT
EHDEGMLEYLEDLIGSGRLKEPIQVLCHRVETLNEQRGEKLNRVKMVEKEKDALEGERNK
AIEFLTLENKMFKEKNHICQYYIYDLQKRINEMETQKQKIHEETKDVNEKSSKLADEMKD
KTKALKDIEKKLNKITKFIEENKEKFTQLDLQDVQVREKLKHAKSKAKKLQRQLQKDKEK
VEELRNVPANSKTEIREATSKKEVLEKDKEREEEKLKQVMDSLKLETQGLQEEKEVKEKE
LMEFNKTVNEARSKMDVAQSELDIYLSRHNTAVSQLNKAKEVLMTTSGTLKERISTIKEL
DTKLPQAERELKEKECKLEQLGRQELDIKNLVRVQRQKVEEAKSSLAVSRSRGRVLDALL
QQKKSGKIPGIYGRLGDLGAIDEKYDIAISSSCGALDYIVVDTIDTAQECVNFLKRQGIG
VATFIALNKMSEWTQHMSKIQTPENIPRLFDLVEVKDEKILPAFYFALRNTLVANNLEQA
TRVAFQKNKRWRVVTLQGQIIEQSGTMTGGGGKVLKGRMGSSVMVEISEEEVNKMELQLQ
NDSKKAVCYQEEKVELEDAIRKLHQSVQEMRSTLEKYTASIQSLSEQEVLLKDQLKELEA
NVIAAAPDKNKQKDLEKNLNAFKKDYECVAGKAGKVESEVKRLHNLIIEINNNKLKAQQD
KLDKINKEIDKYTSAVTKAQVAIKTADRNLKKSEESVLRTETEIGDNEKEIDDLTKMLTT
LEEKATEVMNDCKQAEESLPEVQEQHRNLLQTMKSIQEDEHVLQKEALSIRLKIEQIDSH
VAEHQSKIKYWQKEISKISLHHVQAEPVEELPVLNQEELEAIKDPDIIINQIALLEAQCH
EMKPNLGAIAEYNAKEELYLKRVAELDEITNERDNFRQAYEELRKQRLNEFMAGFNIITN
KLKENYQMLTLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKKIFNLSGGEKTLSSLALV
FALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIG
IYKTYNTTKSVATNPKVIASKGLAELGAVGCC
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaagagaaccaaaacatctacagcagcttgtcaaaaaggaaaagagcccatc
gaagaatccaccagtgacatggaaatgggaagagatgatgcacatctcggtaaactgtct
cagcaagcagccttaaatgaggaacttgctaatcgaagtttagaagaaattttgagtagc
atctctcctcccccaccaccagcaatgaccaatgaagctggagctcctcgcctcatgata
actcatattgtaaaccagaacttcaaatcctatgctggggagcaaattctgggacctttt
cataagcgcttctcatgtattattgggccaaatggcagtggaaaatccaatgtaattgat
tcaatgctttttgtatttggatatcgggcacaaaaaatcagatccaaaaagctctctgtg
ctgatccacaattctgacgaacacaaggacatccagagttgtactgtggaagtacacttt
caaaagatcattgacaaggaaggagatgattatgaagtcattcctaacagcaatttctgt
gtatctagaactgcttacagagataattcttctgtctaccaaatcagtgggaagaaaaaa
acattcaaagatgttggtattctacttcgaagtcatggaattgacctggaccataatagg
tttttaattttacagggagaagttgaacagattgcaatgatgaaaccaaaaggccagact
gaacacgatgaaggtatgctcgaatatttagaagatctaataggatcaggacggttgaaa
gagcctattcaagttttgtgtcacagggttgagacattaaatgaacagagaggggaaaag
ttaaatagagttaaaatggtagagaaagaaaaggatgccttagaaggagagcgaaacaaa
gccattgaatttcttactttggaaaacaaaatgtttaaggaaaagaatcacatttgtcag
tactacatctatgacctacagaaacggataaatgaaatggaaacacaaaagcaaaaaatt
cacgaagagactaaagatgttaatgagaagagtagtaaacttgctgatgaaatgaaagat
aagactaaagccttaaaagatatagaaaaaaagctcaataaaatcacaaagtttatagag
gaaaacaaagagaaattcactcagttggatttgcaagatgttcaagtaagggaaaaatta
aaacatgccaaaagtaaagctaaaaaacttcagaggcaacttcaaaaagataaagaaaag
gttgaggaattaagaaacgttcctgccaacagtaagacagaaatcagagaagcaacatct
aagaaagaagttcttgaaaaggacaaggaaagagaggaggaaaaattaaaacaggttatg
gatagccttaaattggaaacacagggtcttcaggaagaaaaagaggtcaaagaaaaagaa
cttatggaattcaataaaactgtgaatgaagcccgttcaaagatggatgtagctcagtca
gaactggatatctacctcagccgccataatactgctgtctctcagttaaataaagcaaaa
gaggtactaatgactacttccggaactctaaaagaaaggatatctactatcaaagagctt
gacacaaaattacctcaagctgaacgggagctaaaggagaaagaatgtaagcttgaacaa
cttggaagacaggagttggacattaaaaatcttgttcgggttcaacgtcaaaaagtagaa
gaagcaaaaagttctttggcagtcagtcgcagtagaggaagagttcttgatgctctactt
cagcagaagaaatctggaaaaattcctggaatatatgggagattgggagacttgggagct
attgatgagaagtatgatattgctatttcatcatcttgtggtgccttagactacattgtt
gttgatacaatagatacagctcaggaatgtgtgaatttcttgaaaaggcaagggattgga
gttgctacatttatagccttgaacaaaatgtcagaatggacacaacatatgagtaaaatc
cagactcctgaaaatattcctcgtctatttgacttagtggaagtaaaagatgagaagatt
ctcccagccttttattttgcattacgtaacactttagtagccaacaacttggaacaggcc
accagagtagcatttcaaaaaaataaaagatggagagtagtaactttgcaaggacaaatc
atagaacagtcaggaacaatgactggtggtggaggtaaagtactgaaggggagaatggga
tcctcagtcatggttgaaatttcagaagaggaggtgaataaaatggaattgcagctgcaa
aatgattcaaaaaaagcagtgtgctaccaggaagagaaagtagagcttgaagatgctata
agaaaattgcatcaaagtgttcaagaaatgagaagcactttagaaaagtatacagccagc
atacagagtttatcagaacaagaagttctcttaaaagaccaacttaaagaacttgaggct
aatgtaattgctgctgctcctgacaaaaacaaacagaaagacctggaaaaaaatcttaat
gccttcaaaaaagattatgaatgtgttgctggaaaggctggtaaagtagaaagtgaagtt
aaaagattacataatctcataattgaaatcaataataataaacttaaagctcagcaagac
aaacttgataagataaacaaggaaatagataagtatacttctgctgttactaaagcccag
gtggcaatcaagactgcagacagaaatctgaaaaaatctgaggagtctgttcttcgcact
gagacagaaattggagataatgaaaaggaaatagatgacctaacaaaaatgctgacgaca
ctggaagaaaaagctactgaagttatgaacgactgcaaacaagctgaagagtcattacca
gaggttcaggagcagcatcgtaatctacttcaaacaatgaagtcaattcaagaggatgaa
catgttcttcagaaagaggcccttagtataaggcttaaaattgaacaaatagacagtcat
gttgctgagcatcaatcaaagataaaatattggcaaaaggagatatcaaaaatatcactg
caccatgtacaagcagaaccagttgaagaacttccagttctaaatcaagaggagcttgaa
gcaattaaagatccagatattataattaatcaaatagcccttttagaggcccagtgtcat
gaaatgaaaccaaatcttggcgccattgcagaatataatgcgaaggaagaactatacctg
aaacgcgtggcagagctggatgaaattaccaatgagagagacaactttagacaagcttat
gaagagcttagaaaacaaagacttaatgagtttatggctggatttaatataataacaaat
aaactaaaggagaattaccaaatgcttactttaggaggagatgctgaactagagcttgta
gacagtttggatcctttctcagaaggaattgtttttagtgttcgaccaccaaagaaaagt
tggaagaagatatttaacttatcaggaggagagaaaacccttagttccctggctttggtt
tttgctctccatcactacaagccaactccactttatttcatggatgagatagatgcagcc
ctcgacttcaaaaatgtgtccattgtagcattttacatatatgagcaaacaaaaaatgca
caatttatcatcatctctctgcgaaataatatgttcgagattgcagatagattaattgga
atttataaaacatacaacacaacaaaaagtgttgcaacaaacccaaaagtgattgcatct
aaaggacttgctgaacttggtgctgttggatgctgctga
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