Gavialis gangeticus (Gharial): 109288016
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Entry
109288016 CDS
T07453
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109288016 (FXR1)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109288016 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
109288016 (FXR1)
mRNA cycle factors
Stress granule specific factors
109288016 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
109288016
NCBI-ProteinID:
XP_019358893
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVAFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVFSRANEQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKT
VKKNTFFKCTVEVPEDLRDACANENAHKDFKKAVGACRIFYHAETAQLIILSASEATVKR
VTILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDSGTFRIYGESAEAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRLERLQIDEQLRQIGMGFRPSSTRVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSG
GRGRGGPRAGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSANRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNSPKEMLPKNKKEMAKDVIEEHGPSEKAINGPAGASGDEPSKPQPNPEETKST
VQEDGNNQEEAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgttcatgaggattccctcacagttgcatttgaaaacaattggcaaccagagcgc
caggttccttttaatgaagtcagattaccacctcccccggatatcaagaaagaaataggt
gaaggagatgaagtggaggttttctcacgagcaaatgagcaagaaccatgtggctggtgg
ctagcaaaagttcgaatgatgaaaggcgagttttatgtcattgaatatgctgcctgtgac
gctacttacaatgaaattgtcacatatgaacgacttcgacctgtgaaccaaaataaaact
gtcaaaaagaacacgttttttaagtgtacagtggaagttcctgaagatctcagagatgcg
tgcgctaatgaaaatgcacataaagattttaagaaagctgtaggagcttgtcggattttt
tatcatgctgaaactgctcaattaataatactgtctgctagcgaagcaacagtgaaaaga
gtgactatattaagtgacatgcatttgcgcagcattcgtaccaagctaatgctcatgtca
agaaatgaggaagccacaaaacacttagagtgtacaaaacaacttgcagcagcatttcat
gaggagtttgtcgtcagagaagatttaatggggcttgcaatagggacgcatggtagtaac
atacagcaagccaggaaggtcccaggagttacagcaatcgagcttgaggaagatagtggt
actttccggatctatggagagagcgctgaggcagtaaaaaaggctagaagttacttggaa
tttgtggaggattttattcaagtccccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagatagtagacaagtctggagtcgtcagggtgagaattgaaggt
gacaatgaaaacaaactgcccagggaagatggaatggtcccgtttgtatttgttggcact
aaagaaagcattggaaatgttcaggttcttttagaataccacattgcctatctgaaggaa
gtagaacagttaaggttggagaggcttcagattgatgaacaactgcgtcagattggcatg
ggtttcagaccttcttccaccagagttcctgaaaaggaaaagggctacaccacggatgaa
agtaccctctcctctgtacaaggctctaggtcatatagtggaagagggagaggtcgcaga
ggcccaaattatacatcaggttatggtacgaactctgagctctctaatccctctgaaaca
gagtctgagaggaaagatgaactgagtgactggtcattggcaggagaggatgacagggag
agcagacaccagcgtgacagcagaagacgtcctggaggaagaggacgcagtgtttctggg
ggtcgtggacgtggtggaccccgggctggcaagtcctccatcagctctgtgctgaaagat
cctgacagcaacccttacagcttgcttgataacacagaatcagaccagactgtagacacc
gatgccagtgaatctcatcacagtgctaaccgccgcaggcgatcacgcaggcgaagaact
gatgaagatgctgttctaatggatggaatgacagagtctgacactgcttctgttaatgag
aatggtttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtcacagtagctgattatatatcacgagct
gaatctcagagtagacagaggaactccccaaaagagatgctgcccaaaaacaagaaagaa
atggcaaaagatgtgattgaagaacatggcccttctgaaaaggcaataaatggaccagct
ggtgcttctggggatgaaccttctaaaccacagcctaatcctgaagaaacgaaaagtact
gtacaagaagatggaaataatcaggaagaagcagtgctgaatggtgtttcataa
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