Gavialis gangeticus (Gharial): 109288021
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Entry
109288021 CDS
T07453
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109288021 (SOX2)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109288021 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109288021
NCBI-ProteinID:
XP_019358898
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQPASGGGTGNSNSAAPNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLSPGTNSMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQDQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctcaagccgcccgccccccagcccgcctcgggaggc
ggcacgggcaactccaactcggccgctcccaaccagaagaacagcccggaccgggtcaag
cgccccatgaacgccttcatggtgtggtcccggggccagcggcggaaaatggcccaggag
aaccccaagatgcacaactcggagatcagcaagcggctcggggccgagtggaaactttta
tccgaggcggagaagagacccttcatcgacgaagccaagcggctccgcgctctgcacatg
aaggagcacccggattataaataccgaccccggcggaaaaccaagaccctgatgaagaag
gataagtacacgttgccagggggcttgctgtcgccgggcaccaacagcatgaccaccggg
gtcggggtcggggccaccttgggagctggggtgaaccagaggatggacagctatgctcac
atgaacggctggaccaacggagggtatgggatgatgcaagatcagctcggctacccccag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacctatatgaacggatcgcccacc
tacagcatgtcttactcccagcaagggaccccgggcatggccctgggctccatgggctct
gtggtcaagacggaatccagctccagccccccggtagttacttcctcttcccactccagg
gctccttgccaagctggggaccttcgggacatgatcagcatgtacctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactatcagagtgcacct
gttcctggcacagccattaatggcacacttcctctatcacacatgtaa
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