Gavialis gangeticus (Gharial): 109288311
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Entry
109288311 CDS
T07453
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109288311 (MEX3B)
04121 Ubiquitin system [BR:
ggn04121
]
109288311 (MEX3B)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109288311 (MEX3B)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109288311 (MEX3B)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109288311 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109288311
NCBI-ProteinID:
XP_019359366
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDEAGSLYDNE
PRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKE
DVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGP
KGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIELTDD
NDFHANGTDVGFELHGPGSLWSKPTPPSVPPTPGRKPFCSYRNDSSSSLGSASTDSYFGG
GGGSARLADYSPPSPALSFTHNGNNNNNYGYGGGGADALPSPDGCAELPFDSPPGFDLRL
SPPLPGSGGGVEHPLARRVRSDPGGRLLGTSSSSSYPLYAAHLPGLPSDSSGSSSSSSSS
SSSSSCSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKTEPQCPVCHS
AVTQAIRIFS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctttttgcagacatggagaggaacgggagcggcggcggcggaggagga
ggtggcggtggtggcgggggagagaccctggatgaccaaagagcgctgcagatcgccctg
gatcagctctccctgctggggctggacaacgacgaggcgggctccctctacgacaatgag
cctcggaaaaagagcgtgaacatgacagagtgcgtgccggtgcccagctcggagcatgtc
gcggagatagtggggagacaaggttgtaaaatcaaagctctgcgggcgaagaccaacacc
tacatcaagaccccggtgcgcggggaggagccgctcttcgtggtgacgggcaggaaggaa
gatgtggccatggcccggcgggagatcatctcggccgccgagcacttctccatgatccgc
gcctcgcgcaacaagaacacggcgctcaacggcgccgtgccggggccgcccaacctgccg
ggccagaccaccatccaggtgcgggtgccttaccgggtggtggggctggtggtggggccc
aagggggccacgatcaagcgcatccagcagcagacgcacacctacatcgtgaccccgagc
cgcgacaaggagccggtgtttgaggtgacgggcatgccggagaacgtggaccgcgcccgc
gaggagatcgaggcgcacatcgccatgcgcacgggcggcctcatcgagctcacggacgac
aacgacttccacgccaacggcacggacgtgggcttcgagctgcacggccccggcagcctg
tggagcaagcccaccccgcccagcgtcccgcccaccccgggccgcaagcccttctgcagc
taccgcaacgacagctccagctcgctgggcagcgcctccaccgactcctacttcggcggc
ggcggcggcagcgcgcggctggccgactacagcccgcccagccccgcgctcagcttcacg
cacaacggcaacaacaacaacaactacggctacggcgggggcggcgccgacgcgctcccg
tcccccgacggctgcgccgagctgcccttcgactccccgcccggcttcgaccttcgcctc
tccccgcccctgcctggcagcgggggcggcgtcgagcatcccctggcccgccgggtgcgc
agcgacccgggcggccgcctgctcggcacctcctcctcctcctcctacccgctctacgcc
gcgcacctgcccggcctgccctccgactcctcgggctcctcctcgtcgtcctccagctcg
tcctccagctcgtcctgctcgtcctccggcctgcggaggaagggcagccgcgactgctcc
gtctgcttcgagagcgaggtcatcgccgccttggtgccctgcggccacaacctcttctgc
atggagtgcgccaaccgcatctgcgagaagacggagccgcagtgccccgtgtgccacagc
gcagttactcaggccatccgcatcttttcctaa
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integrated database retrieval system
