Gavialis gangeticus (Gharial): 109288340
Help
Entry
109288340 CDS
T07453
Symbol
NEO1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04350
TGF-beta signaling pathway
ggn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109288340 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109288340 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109288340 (NEO1)
Cell adhesion molecules [BR:
ggn04515
]
Immunoglobulin superfamily
DCC/UNC5 family
109288340 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
fn3_2
SusE
TMEM154
GBS104-like_Ig
TM_ErbB1
EphA2_TM
Sp38
Herpes_UL74
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
109288340
NCBI-ProteinID:
XP_019359388
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MTLSSSVRTFTPFYFVVEPTDTLSVRGASVVLNCSAFCETSPKIEWKKDGTFLNLVSDDR
RQLLPDGSLLINSVVHSKHNKPDEGYYQCVATVESLGTIVSRTAKLTIAGLPRFISQPES
TSVYRGNSAILNCEVNADLVPFVRWEQARQPLFLDDRVFKLPSGALIISNATDGDEGLYR
CIIESGGSPKYSDEAELKILPDPEFPSDLVFLRQPSSLIRVTGQSAVLPCAAAGFPTPVI
RWTRNEEELITEGSERFLLLAGGSLEISDITEDDAGTYACIVDNGNETAEAQADLTVLAP
PEFLKQPANIYAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIAKEHNLQVLGL
VKSDEGFYQCIAENDVGNVQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPS
APRDVVATLVSTRFIKLTWRTPASDPQGDNLTYSVFYTKEGINRERVENTSRPGEMQVTI
QNLMPETVYIFRVVAQNKHGPGESSIPLKVATQPEVQLPGPAPNIRAYANSPTSITVTWE
TPLSGNGEIQNYKLYYMEKGMDNEQDVDVGGHSYTINGLKKYTEYSFRVVAYNKHGPGVS
TQDVVVRTLSDVPSAPPQNLSLEVRNSKSIMVHWQPPPPGTHNGQITGYKIRYRKVSRKS
DVTESIGGTQIFQLIEGLERGTEYSFRVAALTINGTGPATDWISAETFESDLDETRVPEV
PSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGVGSPHAQTIKVDYKQRYYTIENLDP
SSHYVITLKAFNNVGEGIPLYESAVTRSQTDTSEVDVFVINAPYTPVPDPSPMMPPVGVQ
ASILSHDTIRITWADNSLPKNQKITDARYYTVRWKTNIPANTKYKTANTTTLSYLVTGLK
PNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPS
EANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMG
PMSEAVQFRTPKASGTGGKGSRPVDLGPDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSV
GVITIVIVVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLEL
KPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRG
MRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVNPWPIGTSMS
HSDRANSTESVRNTPSTDTMPASSSQTCADHQDPDSATGSYLASAQEEDSSQNLPTAHVR
PSHPLKSFAVPAVPPSSSTYDPALPSTPLLSQQASNHPVHSVKTASIGTLGRTRPPMPVV
VPSAPDVQETTRMLEDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgactttatcatccagtgtgagaaccttcacgcccttctattttgtggtggagcccacg
gacacgttatctgttcggggagcttcagtcgtactgaactgttcagctttttgtgagact
tctccaaaaatcgagtggaaaaaagatggaacttttctaaacttggtgtcagatgatcgt
cgccagctgctacctgatggatctttattaataaacagtgtagtgcattccaaacacaat
aaacctgatgaaggatactatcagtgcgtggcgactgtggaaagccttgggaccattgta
agcagaacagccaagctcacaatagcaggacttcccaggttcatcagtcagccagaatcg
acatctgtctatagaggaaacagtgcaattcttaactgtgaagttaatgctgatctagta
ccatttgtgaggtgggagcaggcccgtcagccactttttctggatgaccgcgtgtttaaa
ctaccaagtggagctctaatcattagcaatgcaacggatggggatgaaggactgtatcgt
tgcatcattgaaagtggtgggtcccccaagtacagtgatgaggcagagcttaaaattctt
ccagatccagagtttccatcagacttggtgtttctgaggcaaccctcttcacttatcaga
gttactgggcagagtgccgttttgccatgtgccgctgcaggatttccaactccagttatc
aggtggacaagaaatgaagaagagcttatcacagaaggctctgaaaggtttcttttgctg
gcgggaggtagcctagagatcagtgatatcacggaagatgatgctggaacatacgcctgc
attgtggacaatgggaatgagacagctgaagctcaagcagatcttacagttctagctcca
cctgaatttctgaagcagcctgctaatatttacgctcatgaatccatggatattgtgttt
gaatgtgaagtgactgggaaaccaactccaactgtgaaatgggtcaagaatggagacatg
gtgatccctagtgactacttcaaaattgctaaggaacacaacctgcaggtgctgggtctg
gtgaaatcagatgaaggattctatcagtgcattgcagaaaatgatgttggaaatgtgcag
gctggagcccagctaataatacttgaacacgatgttgccatcccaacattacctcccact
tcactgaccagtgccactactgaccatctagcaccagctacaactggaccgttgccttct
gcccctcgggatgtcgtggccaccctcgtctctactcgcttcatcaaactgacgtggcgg
acacctgcatcagatcctcagggagacaaccttacctattctgtattctacaccaaggaa
ggtataaacagggaacgtgttgaaaatacaagtcgccctggggagatgcaagtgacaatc
caaaacctgatgccagagacagtctacatttttagagttgtggctcaaaataaacatggc
cctggagagagttcaataccattgaaggtggcaacgcagcctgaagttcaacttcctggt
ccagcacccaacattcgagcatatgccaactctcccacttcaatcactgtcacctgggaa
acgccattgtctggcaatggagaaattcagaactacaagctttattacatggaaaagggg
atggataatgagcaggatgttgatgtgggaggtcactcctacaccattaatggcttgaag
aaatacacagagtatagcttccgagtggtggcctacaataaacatggccctggagtgtct
acccaagatgttgttgtgcgaacgctgtcagatgttcccagtgctccaccccagaatctg
tccctggaagtccgcaattccaagagcatcatggtacattggcagccccctcctcctggt
acccacaatggtcaaatcactggctacaaaattcgctaccgtaaagtttctcgtaagagt
gatgtaacagagagcatcggcgggacacagatttttcagctaattgaaggtcttgagcga
ggtacagaatacagcttccgggtggctgccttaacaatcaatggtacaggaccagctact
gactggatatcagcggaaacttttgagagtgacttggatgaaactcgcgttcctgaagta
ccaagttcgttacatgtccgtccactggttaccagtatagtagtaagctggacgcctcct
gaaaatcagaatattgtggtgagaggatatgctatagggtatggtgttggcagtcctcat
gcacagaccatcaaagtggactacaaacagagatattacaccattgagaacttagatcca
agttcccactatgtcataactctgaaagctttcaacaatgttggcgaaggcatcccactc
tatgagagtgcagtgaccaggtcacagacagacacttctgaagttgatgtatttgttatt
aatgctccatacactccagtgccagatccctcccccatgatgccgccagtgggcgttcag
gcttccattctgagtcatgacaccataaggatcacttgggcagacaactctctgccgaag
aatcagaagatcacagatgctcgctactacacagtgcgctggaaaaccaacattcctgca
aacaccaagtacaagactgcaaacacgaccactttgagctatttagtgactgggttaaaa
cctaacaccttgtatgaattctctgtgatggtaactaaaggtcgaagatcaagcacttgg
agtatgacagcacatggaaccacctttgaattagttcctacctctccgccaaaggatgtg
actgtagtaagcaaagaaggaaaacctcggaccataattgtgaactggcaacctccatct
gaagcgaatggcaaaattacaggatacatcatttactacagcacagatgtgaatgctgag
atacatgattgggtcattgaacctgttgtgggaaacagattgactcaccagatccaagaa
ttaacccttgatacaccatattatttcaaaatccaggcacgcaactccaaaggcatggga
cccatgtcagaggcagtccagttcagaacacccaaagcttcaggaactggaggtaaagga
agtcggccagtggatctaggaccagactacaaaccaccaatgagtggcagtaacagtcct
catggaagccccacatcgcccttggatagcaacatgcttctagtgatcatagtatctgtt
ggagtgatcaccattgtgatagtggtgattgttgccgtcttctgcactcgtcgtaccact
tctcaccagaaaaagaaacgagctgcctgcaaatcagtgaatgggtctcataaatacaaa
ggaaactccaaggatgtcaaacccccagacctctggatccatcatgagagactggagcta
aaacctattgataaatctccagaccccaacccaatcatgacagacaccccaattcctcgt
aactctcaagacatcacaccagttgacaattccatggatagcaatatccatcaaaggcgg
aactcttaccggggacatgagtcggaggacagcatgtccacactggcaggaagaaggggg
atgaggccaaaaatgatgatgccatttgattctcagccacctcagcctgtgattagtgct
catcccatccattcactcgataaccctcaccatcatttccactccggcagcctcgcttct
ccaactcgcagctatcttcatcatcaggtcaacccatggccgattggcacgtccatgtcc
cattcagacagggccaattctacagaatctgttcgaaacacacctagcacagacacgatg
ccagcttcctcatctcagacctgtgctgaccaccaagatccagacagtgccacaggatcg
tatctggccagtgcacaagaggaggattcaagtcaaaacctccctactgcccatgtccgt
ccctctcaccctctgaagagctttgcagtgccagcagtcccacccagcagttccacatat
gaccctgccttgccaagcacaccattactgtcccagcaagcttccaaccatccagttcac
tcagtgaagactgcatcgattgggactttaggaagaactcgacctccaatgccagtggta
gtccccagtgcccctgatgtgcaggagaccactcgaatgcttgaggattcggaaagtaac
tatgaaccggatgagctgaccaaagagatggcccacctggaaggactgatgaaggacctt
aatgccatcactacagcatga
DBGET
integrated database retrieval system
