Gavialis gangeticus (Gharial): 109288489
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Entry
109288489 CDS
T07453
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109288489 (CHD2)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109288489 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
109288489
NCBI-ProteinID:
XP_019359579
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSHASSHSASEEASGSDSASQSESEQGSEQGSEHGSDSNSSSESS
ESQSESESESTGSKSQQTPPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKDEASSESENESPKRRGQKQMKKTNKWKREVSGEEEDEDGGGQGTSAESEPEPKKV
KARRPAPRRAVAKTSVKKPHKPQRGKRRKKQDSSEDDDDDDDDETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVLDVRIGKKGATGASTTVYATEANGDP
SADFDPEKDEREVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWL
AKVSPEDVEYYNCQQELAAELNKQYQIVERVIAMKTNKSATGHSEFPAHSRKTSSNDPEY
LCKWMGLPYAECSWEDEALICKKFQHCIDSFNNRNNSKNIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLIVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNTIREYEWIHAQTKRLKFNVLI
TTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWDDFEDDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERENGSEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEEEETELDEKSQRDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQL
KENPGEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPTDPEERKKYCLTCRV
KAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLADKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLEKKENTKDGEESKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNP
SEEGEVKVGESKEDGLEKSPVKKKQKKKENKENKEKQTTTKKEKEGDKEKKKTKDKKEKA
KSSDAKSGSKGKRSQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLD
KPDKGLMVQEQLEHTRNCLLKIGDRISECLKAYNDQDHIKLWRRNLWIFVSKFTEFDARK
LHRLYKMAHKKRSQEEEEQKKKEDMSGAKKPFRAEPPGSSHDSVMSQSHMPHNLHSQKLH
LPPSHPQQQMHGHQRDNYSHPNKRHFSNTDRGDWQRDRKFNYGGNSNQVWGGDRHHQYEQ
HWYKDHHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEPYNSERDHRGHRDYYDRHHHDSKR
RRSDEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHIDKSGDYKQPLPLPHPQVS
DPRSPPSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNMRKT
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagttcacagccatgcatcg
agtcactcggcatctgaagaagcctctggctccgactctgcaagccagtctgaaagtgag
cagggcagtgagcagggcagtgagcatggcagtgattcgaacagcagttcggagtcctcc
gagagccagtccgagtccgaaagcgagtcgacgggctcaaaatcccagcagaccccgcct
gaagccaaggaaaagccagcctccaagaaggaaaggatagcagatgtgaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagagccgtcg
cgatttaatataaaagatgaggcaagtagcgaatctgaaaatgagagccccaaaagaaga
ggccagaagcaaatgaaaaaaacaaataaatggaaaagggaggtttctggggaagaggag
gatgaagatggaggggggcaaggcaccagtgcagaaagtgaaccggagccgaagaaagtt
aaagctagaagacctgccccgagaagagcagtggccaaaaccagtgttaaaaagccccac
aaaccccagcgtgggaagaggagaaagaaacaagactcatcggaagatgacgatgacgat
gatgatgacgagactccaaaaaggcaaactcgccgccgagcagccaaaaatgtcagttac
aaagaagatgatgattttgagactgattcggacgacctgattgagatgaccggggaagga
gcggacgaacagcaggacaacagcgagaccattgagaaagtcttggatgtcaggattgga
aagaaaggagccactggtgcatccaccaccgtgtatgctacggaagccaacggtgacccg
agtgctgactttgaccctgaaaaggatgaaagagaagttcagtacttgatcaaatggaaa
ggctggtcttacatccacagcacgtgggaaagtgaagagtccctgcagcagcagaaggtg
aagggtctgaaaaagctagagaacttcaagaagaaagaggaggaaatcaaacagtggcta
gccaaggtgtcccccgaagatgtggaatactacaactgccaacaggaactggctgcagag
ctgaataaacagtatcaaatagtggagagagtgattgctatgaagaccaacaagtctgca
acgggacattctgaattcccagctcacagtcggaaaacatcctctaacgatcccgagtac
ctgtgcaagtggatggggctgccctatgcagaatgcagctgggaagacgaggctctgatc
tgcaagaaattccaacactgcatcgacagcttcaacaatcgcaacaactccaaaaacatt
cccacacgggattgcaaggtgctgaagcagagacctaggtttgttgccttgaagaaacag
ccttcttatattggtggcgagaacctggagctccgagattaccagctggaaggcctcaac
tggctggctcactcatggtgcaagaacaacagtgtgatcctggctgatgaaatgggcttg
gggaagactatccagacaatatcattcctctcctatctcttccatcagcatcagttgtac
ggtccctttctaatagtggtacctttgtctactctcacctcatggcagagagagtttgaa
gtctgggcaccggagataaatgtggtcgtgtacataggagatctgatgagcaggaatacg
atccgtgaatatgagtggatccatgctcagacgaaaaggttgaaattcaacgtgctcatc
acaacatatgagatccttctcaaagacaaggctgtcctgggcagcattagctgggccttt
ttgggagtggatgaagcccatcgactgaagaatgatgactctctgctatataaaactctg
attgatttcaagtccaatcacaggctgctgatcactgggaccccacttcagaattccctc
aaggagctctggtcactgctgcacttcattatgccagagaagtttgagttttgggacgat
tttgaagatgatcatgggaaagggagagagaacggctaccagagtcttcacaaagtcctg
gagccttttctcctgcgcagggtgaagaaggatgtggaaaaatccctgccagccaaagtg
gagcagattctccgggtggaaatgtctgccctgcagaagcagtattataaatggattttg
accagaaattacaaggctctttccaaagggacaaggggcagcacatctggcttcctaaat
attgtgatggagctgaagaagtgctgcaaccattgctatctcatcaaacctccagaggaa
aatgagagggagaatggctctgagatactgctgtctctgatcaggagcagtggaaagcta
attctcttggacaagctgctgaccaggctgcgtgagaggggtaacagagtcctgatcttc
tctcagatggtgaggatgctggacatcttggcggagtacttggctatcaagcactaccct
tttcagcgcttggacgggtcgatcaaaggggagatccggaagcaggctctggatcacttc
aacgctgatggctctgaggacttctgtttcctgctgtcaacacgagctggtggactgggg
attaacctggcttctgcagacaccgtggtgatctttgactcggattggaacccccagaat
gacctgcaggctcaggcccgggctcacagaatcggacagaagaagcaggtgaacatttac
cgcttggtaacaaagggaacagtagaagaggagatcatcgagagggccaagaaaaagatg
gtgttggatcatttggtgatccagcgtatggacaccacaggtcggactgtactggataac
aattctgggagatccaattcaaatcctttcaacaaagaggagttgacagctattctgaag
tttggagcagaagacctcttcaaggagctggaaggggaagagtcagaacctcaggaaatg
gatattgatgagatcctgcgcctggctgaaacacgagagaacgaagtgtccacaagcgcc
acggatgagctcctgtcccaattcaaggtggccaactttgcaaccatggaggaggaagag
actgagctggatgagaagtcccagagagactgggatgacatcattcctgaggagcagagg
aagaaagtcgaggaggaggaacgacagaaggagctggaggaaatctacatgttacccaga
atccggagctctaccaaaaaggctcagacaaatgacagtgagtcggatgctgaaacaaag
aggaggcttcagaggtcttctgggtcggagagtgagaccgatgacactgatgatgaaaaa
aggccaaagcgcagaggccgtccccggagcgtgaggaaggataccgtggaaggattcacc
gatgctgaaatcaggaggtttatcaaggcatataagaaattcgggcttcctcttgaaagg
ctggagtgcattgcccgggatgctgagctggtggacaagtctgtagctgatctgaaacgt
ttgggggagcttattcacaacagctgcgtgtcagcgatgcaagaatatgaggagcagctg
aaagaaaatcctggtgagggcaaagggcctgggaaaaggaggggcccaaccatcaagatt
tctggagtccaagtcaacgtcaaatccatcatccagcatgaggaggagtttgaaatgctg
cacaaatccattcccacagaccctgaggaaaggaagaaatactgcctgacctgtcgtgtc
aaagctgcccattttgatgtcgactggggagtggaggaggattctcgcttgttagttgga
atttatgaacatggctatggaaactgggagctaattaaaacggacccagaactgaagtta
gctgataagatcctacctgttgagacagataagaaacctcagggaaagcagctccagacc
cgagtcgactatctgctgaaactgctgaagaaagatctagagaagaaagaaaacacgaaa
gacggggaagagagcaaactaaagaagaggaaaccacgtgtaaagaaagagaataaagcc
cctaaagtcaaagatgagcatgggaatgaactgtcctcgcctcggcactctgacaaccca
tcagaagagggtgaagtcaaggtgggtgaatccaaggaggatggtttggaaaagagccca
gtgaaaaagaaacagaagaagaaagagaacaaagagaacaaggagaaacagacaaccact
aaaaaggagaaggaaggcgacaaagagaaaaaaaagacaaaggataagaaagagaaggcc
aaaagcagtgatgcaaaatctggaagtaaagggaagagatctcagggtcctgtgcacatt
actgcaggaagtgaacccatccccattggtgaagatgaggatgatgacctggaccaagaa
acattcagcatatgcaaagagaggatgaggccagtgaagaaggcattgaagcaactggat
aagccagataagggattgatggtgcaggaacagctggagcacacccgcaactgcctcctg
aaaattggggatcgcatctcagagtgccttaaagcgtataatgaccaggatcacattaag
ctgtggagaaggaacctatggatctttgtgtccaagttcacagaatttgatgccagaaaa
ctgcacaggctctacaagatggctcacaagaaaaggtcccaggaggaggaggagcagaag
aagaaggaggatatgtctggagccaaaaagccatttcgcgcagaaccgccaggctccagc
catgactctgtgatgtctcagtctcatatgcctcacaacctgcactctcagaaactccac
ctgcctccctcccaccctcagcagcagatgcatggccaccagcgggataactacagccac
cccaacaagagacacttcagtaacacagatcgaggcgactggcagagagatcgaaagttt
aactatggtggtaacagcaaccaggtctggggtggagatcggcatcaccagtacgaacag
cattggtacaaggatcaccactatggggatcgccggtctcgcggcgaccctcaccgaagc
tctgggaactaccgaccaaataacctctcccgcaagaggccgtatgagccgtacaatagc
gagcgagaccacagaggacacagagattattacgacagacaccatcacgattccaagcgg
cgacgatccgatgagttcaggccccaaaattaccaccagcaggatttccggaggatgtcg
gatcacaggccacccatgggataccatggccagggaccttcggaccattaccggtccttc
cacatagacaaatcgggggattacaaacagccgcttccccttcctcacccccaagtctcg
gaccctcgctcgcccccgtctcagaaatcccctcacgattccaagtcgcccctcgatcac
cggtcgcccctggacaggtcattagaacagaaaaacaatccagattataactggaacatg
cggaaaacataa
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integrated database retrieval system
