Gavialis gangeticus (Gharial): 109288615
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Entry
109288615 CDS
T07453
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109288615 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109288615 (MYO5C)
04131 Membrane trafficking [BR:
ggn04131
]
109288615 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109288615 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ggn04812
]
109288615 (MYO5C)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109288615 (MYO5C)
mRNA cycle factors
P-body specific factors
109288615 (MYO5C)
Membrane trafficking [BR:
ggn04131
]
Others
Actin-binding proteins
Myosins
109288615 (MYO5C)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109288615 (MYO5C)
Cytoskeleton proteins [BR:
ggn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109288615 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
109288615
NCBI-ProteinID:
XP_019359776
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MALVELYTQYNRVWIPDSEEVWQSAEITKDYRTGERVLHLRLEDGTELAYSVDPTALPPL
RNPDILVGENDLTALSYLHDPAVLHNLKVRFVESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAM
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRRHQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKPLKLGSAEEFNYTRMGGNTVIEGVDDR
ADMMETRKTFTLLGLKEDFQMDVFKLLAAILHLGNVQIMAVGDDRSSVSLEDKHLDIFCE
LLDLDSEPMAQWLCQRKIITSSETVIKPMTKLQALNARDALAKKIYSHLFDYIVERINQA
LQFTGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPAIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNFINKNPLFQKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYEVLIEILKSSKFHLCANFFKDNPAPISRF
GSAIKVKPARPVVKAPNKQFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKMPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMMQLELSLSDKKKVCRTV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRADKLRQACIMIQKNVRGWLQRKKFLHVR
RATIIIQQYFRGQRTVRQAITATALKQTWAAIVIQKYCRGYLVRKLCQLIHVAAVTIQAY
TRGFLARKKYRKMLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENHGLLEKLTSLASTHAHDLDTIQKLELELEKLTTQKKISEDKGKKYKDDKEQKISK
LEKQAKELHEEKEVLQAKLQEKTEEMKDKMDDLTRQLFADVQKEERQRIILEKNFQNQKQ
DYEKEIESLKEEIKTLSKEKIQLQHQIQQELIIQEGLKMEAEQLTKQLQIIPELQKEIEL
LQAQKIDVEKQAQSQKREMREKMSEVAKQLLDSYDLEDVRSRLSTEDLEHLNEDGEIWFA
YEGLKKATRVLESHFQSQKDIYEKEIEALNFKVEHLSQEINHLQKLFREENDINDSIQLE
VSRLTSENMVIPDLKQQISELQNQKMDLENHFQEQTAKMKGKMEGISDQLHHNLSKEGTP
RRKLEAENEIYTKEKEKLIATSQEIQETNDHLKKQHGNEIKRQEASRLAVENMELEEKLD
MKDRMIKKLEDQIKTLTKTIEKANELHVPAAPKEYIGMMEYKKEDEGRIVQNLILDLKPR
GVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNITINGIKQVIKEHIEDFEMVSFWL
SNTYYFLNSLKQYSGEEEFMKHNTPRQNKNCLKHFDLSEYRQILSDLAIHIYHQFIIVME
NNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYSTMCQN
GLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKNLQNS
TAKETLEPLSQAAWLLQVNKITDDDAKEICECCTSLSTVQIVKILNSYTPIDDFEKRVAP
SFVRKVQAMLNNREDMPQLMLDTKYLFQVTFPFTPSPYALETIQIPSSFKLGFLTRV
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggttgaactgtacacgcagtacaacagggtttggattcctgatagtgaagaa
gtttggcagtcggcagaaatcacaaaggactacagaactggagagcgtgtgcttcaccta
cgattggaagatggaactgaattggcttactctgttgatccgacagccttgccacctctg
cgaaatcctgacatactcgttggtgaaaatgacctcactgcgcttagctatctccatgac
cctgctgttttacacaaccttaaagttcgttttgtggagtctaagcttatctacacgtat
agtggaatcattctggttgcaatgaacccctacaaacaattaccaatttatggagatgct
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaggcttacaagcaaatggcaagaaataacaaaaatcagtccattatagtcagt
ggagaatcaggagctggaaagactgtgtctgctcggtatgctatgaggtattttgccatg
gtcagtaagtcaagcagcaatgcacatgttgaggataaagtattggcttccaacccaata
acagaggctgtgggtaatgcaaaaacaacacgcaatgacaacagtagtcggtttgggaag
tatactgaaatcagctttgatcgcaggcatcagatcattggagcaaatatgaggacgtat
ctacttgagaaatccagggttgtttttcaatcagagaatgaaagaaactaccacatattc
tatcagttgtgtgcatctgctctgcaaccagaatttaagcctcttaaattggggagtgca
gaagaatttaattatacacgaatgggtggcaatactgttattgagggagtcgatgacaga
gcagacatgatggaaactcggaaaacgttcactcttctaggtctgaaggaagattttcag
atggatgtttttaagttactggcagcaatcctgcacttaggcaatgtgcaaataatggct
gttggtgatgacagatcatcagtcagtctggaagataaacatcttgatatattctgtgaa
cttctggatttagatagtgaaccaatggcacagtggttgtgccaacgaaagattatcact
tcctcagagactgtaataaagccaatgacaaaactacaagctcttaatgccagggatgca
ttggcaaagaaaatctattctcacttgtttgactacattgtggaaagaattaaccaagcc
ttgcagtttactgggaagcagcacacttttatcggcgtcctagacatttatggctttgaa
acttttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacaa
cagcaatttaacctgcatgtctttaaacttgaacaagaggagtatatgaaggaagatatc
ccatggaccctaatagatttttatgacaatcaaccagccattgaccttattgaagctaaa
atgggaatattggagctgctagatgaagagtgcttgttacctcagggaacagatgagaat
tggcttcaaaagctgtataataattttatcaacaagaacccactctttcaaaagccaaga
atgtcaaacacatcttttatcatccagcactttgctgataaggtagaatataaatgtgaa
ggttttttggaaaaaaacagagatacagtctatgaagttttaattgaaattttgaaaagc
agcaagtttcatctctgtgcaaacttttttaaagacaatccagcacccatttcacgcttt
ggttcagctatcaaagtcaaacctgcaagaccagtggtcaaggcccctaacaaacagttt
cggacaacagttggcaataagttccgcagttctttgtatttgcttatggagacacttaat
gcaaccacgcctcactatgtccgatgcataaagccaaatgatgaaaagatgccatttgag
tttgactccaagcgggtggctcagcagcttcgagcgtgtggtgttctggaaactattcga
attagtgcacagagctatccttccaggtggacatacatagagtttttcagccgttatagc
attctcatgatgcagcttgaactctcactaagtgacaagaaaaaggtttgcagaactgtt
ttgcagcggctaatccaggatcctaaccagtatcagtttgggcgaacaaaaattttcttt
agagcagggcaggttgcttatttagaaaaactacgggcagacaaactgaggcaagcatgc
atcatgatccaaaagaatgtccgaggctggctgcagcggaagaaattcctccatgtcaga
cgagcgactattataatacagcagtacttccgtggacagcggactgtacggcaagccata
actgctacagccctaaagcaaacatgggcagctatagtcattcagaagtactgtcgagga
taccttgtccgtaaactttgtcagctcatccatgtggctgctgtaacaattcaagcttat
acacgaggatttttagcaaggaaaaaataccgaaagatgctcaaagaacacaaggcagtt
atccttcagaagtatgcccgtgcctggcttgcaaggcgtagatttcaaaacattcggcgg
tttgttttgaatattcaactttcatacagggttcagcgattacagaagaaactagaggac
cagaacaaagaaaatcatggcttactggagaaattgaccagcctagcttcaactcatgca
catgacctagatacaatccagaaacttgaattagaacttgaaaaattaaccacacaaaaa
aaaatctccgaggataaagggaagaaatacaaggatgacaaggaacagaaaatctcaaaa
cttgagaaacaagctaaagaattacacgaagagaaagaagttttacaagcgaagctccaa
gagaaaacagaggaaatgaaagataaaatggatgaccttaccagacaactctttgctgat
gtacaaaaagaagaaagacaaagaataatactagagaaaaacttccaaaatcagaagcaa
gactatgaaaaagagattgaatcactgaaggaggaaattaagactctcagcaaagagaaa
attcagctacagcatcaaattcagcaagaacttattattcaggaaggcttaaaaatggaa
gcagaacagcttacaaaacagttacagataatacctgaattgcaaaaagaaattgaactc
cttcaggcacagaaaattgatgtggaaaagcaggcccaatcccagaagcgagagatgaga
gagaaaatgtcagaagttgcaaaacaactccttgacagctatgacttagaagatgtaaga
agcaggctctctacagaagatttggaacatttaaatgaagatggagaaatttggtttgct
tacgagggcctgaaaaaagcaacaagagtgttggaaagtcatttccagtctcagaaagac
atttatgaaaaagagattgaagctttgaactttaaagttgaacatctcagtcaagaaatt
aaccatttacagaagctatttagggaggaaaacgacataaatgacagtattcaactcgaa
gtcagcaggctaacatcagaaaacatggtgatcccagaccttaaacagcagatttctgaa
ctgcaaaaccaaaagatggatcttgaaaaccattttcaagaacagactgcaaagatgaaa
ggaaaaatggaaggaatatctgatcagttgcatcataatctatcaaaggaaggaacccca
aggagaaaactggaagctgagaatgaaatatacacaaaagaaaaagaaaagttgattgcc
acaagccaagaaattcaggagacaaacgatcacttaaagaaacaacatggaaatgaaata
aagaggcaggaggcatctcgccttgctgtggaaaacatggagcttgaagaaaagctagac
atgaaagacaggatgataaagaaactggaggatcagatcaagactcttaccaaaactatt
gaaaaggccaatgaactgcatgtgccagcagcacctaaagaatacattggaatgatggaa
tacaaaaaggaagatgaaggaagaattgttcaaaatctaattcttgatctaaagccacgt
ggtgtggtagtaaatatgataccaggtcttccagctcacatcctatttatgtgtgtgaga
tatgcagactatctcaatgatgctgatatgctgaaatctttcatgaacataaccattaat
gggatcaagcaagttattaaggaacatattgaagattttgaaatggtgtctttttggctg
tccaatacatactattttcttaacagtctgaaacagtatagtggggaagaggagttcatg
aagcacaacactccccgtcagaataagaactgtttgaagcattttgatctttcagagtac
agacagatacttagtgacttggccattcatatctatcaccagttcatcattgtaatggag
aacaacattcagccaatgatagtgccaggcatgcttgaatatgaaagtcttcagggaatt
tctggcttaaaaccaacaggattccgtaaacgttcttctagtatagatgacacagatgcc
tacacaatgacttctatcctgcaacaactcagctatttttatagcacaatgtgccagaat
ggcttggactctgagcttctaaagcaggcagtgaaacagcttttctttctcattggagct
gtcaccctcaatagtctcttcctccgcaaggacatgtgctcttgtaggaaaggaatgcag
ataagatgcaatatcagctacttagaagaatggcttaaagaaaagaatttgcagaacagc
actgctaaggaaaccctggagcctctctctcaggcagcctggctccttcaggtcaacaag
atcacagatgatgatgccaaggaaatatgtgaatgctgtacatccctgtccactgtgcag
atagtaaagatcctcaattcatacactcctatagatgactttgagaaaagagtggcccca
tcatttgttcgtaaagtccaggccatgctaaataatcgagaagatatgccacagttgatg
ctagacaccaaatatctctttcaagtgacgtttccctttaccccctctccatatgcactg
gaaactatacaaatccccagtagtttcaaacttggcttcctaacaagagtgtaa
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integrated database retrieval system
