Gavialis gangeticus (Gharial): 109288633
Help
Entry
109288633 CDS
T07453
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04120
Ubiquitin mediated proteolysis
ggn04144
Endocytosis
ggn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109288633 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109288633 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
109288633 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109288633 (NEDD4)
04121 Ubiquitin system [BR:
ggn04121
]
109288633 (NEDD4)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109288633 (NEDD4)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109288633 (NEDD4)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109288633 (NEDD4)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
HECT type E3
109288633 (NEDD4)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
109288633 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
109288633
NCBI-ProteinID:
XP_019359807
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MARRLRLHFAARRSNTDPLSEASEDDLDNNIYMHFKRPSKNSASNVIEMKLTPRRAVFPP
VMQEIINQQQSASGSSLEKNNKRSTSLQISLQSRKYSGCLQSGDIVATNEDSSFTGVGNE
GNCSGRNIADYPSNMINTTSHLSSTTMFNGSLGSIAASDNGSFSSAGSDYGSCTSTTSDG
GSHCNSVLSDNSSCTLSTGDGTVYNSIVYDNSLYRRTTNKYNSYRKDASQESLCQSNTIF
DQDGLEQVKLSARRKTKVPLRRCSSLVIFPQSPSSTPPMSPTSSGPPPQSVAYQTSHKLV
ISPSDLAQHENQTGNKEFLSTAVNGLRLSKSAFSPGEVRAIRPLYLNSSLQAKSQATDSS
EQATCEETSDGFSCISVHLTQKVSASRDEMVNSCGSPESKLNFGAACPHLKLTHSTSACL
PSENNSEYRINGNELKRPNIQMNKTHHFLQRSMSLEGSCQKVSCYLSSLKYKCPKAGASH
LHIQFRPGNEGKTNGFKKRNGISKREMCNRTLWKPLKTRDDFLGQVDVPLYQLPTENPSM
ERPYTFKDFVLHPRSHKSKVKGHLRLKMTYLPKNNGSEEENTEQAEELEPGWIILDQPDA
ACQLQHQQQEIPPLPPGWEERQDILGRTYYVNHEFRRTQWKRPTAQDSTTDADHGSFQLE
AQHAFTHRHQISEDSENLDNRDSPESWEIITEDEATMYSNQSLQMPLSQSNSDVQTQLAE
ELNTRLTTSGSSASGQPAFYTNHSSRRSSLQTYRVEEQPALPVLLPTSSGLPPGWEERQD
EKGRSYYIDHNSRTTTWIKPVVQTTIETGQLSTVQSTSTGQQPPSSDSSQSETEQGLLPK
GWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHLRRKTSLDPTDLGPLPPGWEERTHTD
GRIFYINHNTKKTQWEDPRLQTAAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMK
VHRTTILEDSYRRIIAVKRAEFLKAKLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYG
LFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQ
KPITLHDMESVDSEYYNSLKWILENDPAELDLRFMVDEELFGQTHQHDLKSGGSEIVVTN
KNKRDYIHLVIQWRFVSRVQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVA
DWKLHTKYKNGYSINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNG
PQLFTIEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWEKLLLAIENTQGFDGVD
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaggttaagattgcattttgcagcccgaagaagcaacaccgatccactgtca
gaagcctctgaagatgacttggataataatatttatatgcatttcaaaagaccttcaaag
aattctgcatctaatgtcatagaaatgaaactgactcccagacgagcagtctttccacct
gtaatgcaggaaataattaatcaacagcaaagtgcaagtggttcttcgctggaaaaaaac
aacaaaaggagcacttcgcttcagatttccctgcagtctagaaagtacagtggatgtctt
cagtccggtgatatagtagctactaatgaagattcatcattcactggtgtcggcaatgaa
gggaactgttctgggagaaatattgctgattatccttctaacatgataaataccaccagc
cacttgagcagcactaccatgttcaatggcagtcttggcagtattgcagccagtgacaat
ggatccttcagtagtgctggcagtgactatggatcatgcacaagtaccacaagtgatgga
ggttcacactgcaacagtgtccttagtgacaatagtagttgcactctttccacaggtgat
ggtactgtttataatagcattgtatatgataactctttgtatagaagaactacaaacaaa
tataattcctataggaaagatgcatctcaggaaagtttgtgtcaaagtaatactattttt
gaccaagatggtttggagcaagtgaaattgtcagcaaggaggaaaactaaagttccacta
agacgttgttcatcgttggtaattttccctcaaagtccttccagcactccaccgatgtct
ccaacaagctcaggtcctccaccacagagtgtggcgtatcagacctcacataaactagtt
atttctccaagtgatctggcacaacatgaaaatcaaactggtaataaggagtttctttca
acagcagtcaatggacttcgactctctaaatctgctttctctcctggtgaggttagagcg
attagaccactttacttgaatagttcattacaggccaaaagtcaagccacagatagttct
gagcaggcaacttgtgaagaaacatctgatggcttttcttgtatttcagttcaccttact
caaaaagtatctgcatcaagggatgaaatggttaatagttgtggcagtccagaatcaaaa
ctaaactttggtgcagcgtgccctcatttaaaactgacacatagcacatctgcatgttta
ccctcagaaaacaattcagaatatcggattaatggaaatgaactaaaaagacctaatatt
caaatgaacaaaacccaccattttctgcaaagaagcatgtccttagaaggttcttgccag
aaagtttcttgctatttatctagtcttaaatacaagtgtcctaaggcaggggcatctcac
ttgcacatacagttccgacctgggaatgaaggaaaaactaatggctttaaaaaaagaaat
ggaatttccaaaagggaaatgtgtaacaggactttgtggaagcccctcaagaccagagat
gacttcctaggccaagtggatgttcctctttatcagttaccgacagaaaatccaagtatg
gagagaccatatacatttaaggattttgttcttcatccaagaagtcacaaatcaaaagtt
aaaggtcatcttagattaaaaatgacttacttacctaaaaataatggatctgaagaagaa
aatacagaacaggcagaggaattagagcctggctggattatattggaccaaccagatgct
gcttgccagctgcaacaccagcaacaggaaattcctcctctacctccaggctgggaagaa
aggcaagatatacttggcaggacttattatgtcaaccatgaattcagaaggacacagtgg
aagagaccaactgctcaggacagtacaactgatgcagatcatgggagctttcagttggaa
gcacagcatgcatttactcatcggcatcaaatatcagaagattctgaaaatttagacaac
agggattctcctgagagctgggaaatcattactgaagatgaggcaactatgtatagcaat
cagagtctacaaatgcctctgtcacagagtaattctgatgtacagactcagcttgcagaa
gaattgaataccagacttactacctccgggagttcagccagtggccaaccagctttttac
actaatcattccagcagaagaagtagtctgcagacatacagggttgaggaacagcctgca
cttcctgtgttattgcctacttcatctggattgcctccaggttgggaagaaagacaagat
gaaaaaggacgatcgtattacatagatcacaattccagaactactacctggataaagcct
gttgtgcagactacaatagaaacgggtcagctatcaactgtccagagtacttctacagga
cagcagccaccatcaagtgattcatcacaatctgaaacagagcaaggattgctccctaaa
ggctgggaagtccgacatgcaccaaatgggagaccattctttattgatcacaataccaaa
actactacatgggaagatccaagattgaaaattccagctcatctaaggagaaagacctct
ctagatcccacagatctaggccccttgccaccaggatgggaagagagaactcatacagat
ggaagaatattctacataaaccacaacacaaagaaaacacaatgggaagatccacgacta
cagactgcagcaattactggaccagctgtgccttactccagggattacaaaagaaaatat
gaattcttcagaaaaaagttgaagaagcagagtgatattccaaatagatttgaaatgaaa
gttcatcgcacaacaatccttgaagattcttatagaagaattatagctgtaaaaagagca
gaattccttaaagcaaaactctggattgagtttgatggtgaaaaaggattagattatgga
ggagtggcaagggaatggttcttccttctctctaaagaaatgtttaatccctattatgga
ttgtttgaatattctgctacggataactatactctgcagatcaatccaaattctggcttg
tgcaacgaagatcatctctcttacttcaaatttataggtcgtgtagctggaatggctgtt
taccatggcaagcttttggatgccttttttattcggcctttttacaagatgatgcttcaa
aaaccaataacgcttcatgacatggaatctgtggacagtgaatattacaattctttgaaa
tggattcttgaaaatgacccggcagaattggacctcaggtttatggttgatgaagaacta
tttggacagactcatcaacatgatttgaaaagtggtggatcagaaatagtagttaccaac
aagaacaagcgagactatattcaccttgtaattcaatggaggtttgtgagcagagtccag
aaacaaatggctgcctttaaggagggattttttgaactgataccacaggacctaattaaa
atttttgatgaaaatgaattagagttattaatgtgtggactaggagatgtggatgtggct
gactggaaactacatacaaaatacaaaaatggttacagcataaatcaccaagttatacag
tggttttggaaggcagtgttgatgatggattctgaaaagcgaatacgattacttcagttt
gtcactggtacatcccgtgtacctatgaatggatttgctgaattatatggttcaaatgga
ccacagttgtttacaattgaacagtggggcacccctgaaaaactgccaagagctcatact
tgctttaatcgcttggatttgcctccatatgactcatttgaagacttatgggaaaaactc
ctcttagcaattgaaaatactcagggttttgatggagtcgattag
DBGET
integrated database retrieval system
