Gavialis gangeticus (Gharial): 109288734
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Entry
109288734 CDS
T07453
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109288734 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109288734 (NEIL1)
Enzymes [BR:
ggn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
109288734 (NEIL1)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109288734 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
109288734
NCBI-ProteinID:
XP_019359993
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MPEGPELHLASRYINTVCAGLLFSGKVEKSAVSKNPEVPFESCTYVISATPRGKEVKLTL
MPVKEEEESLQLAEESSPAGQDPDSPPQPMDVVFRFGMSGSFKLVPEAELPKHAHLRFYT
RESPRRILCFVDFRRFGRWEVQGTWQPDRGPCVMLEYEKFRENVLKNLSDKAFDKPICEA
LLNQKFFNGIGNYLRAEILYRLRIPPFEKARTVLEALQHREQDPALTLSKKVKLKRENPD
LLELCHSLPMEVFHLGGKGYDPESSDDFTAFQQWLRCYYVAGMKSLRDSNGRTIWFQGEP
GPMAPKGKKSHKKHARGKADLDAPSSKETKPPSKRSSKDSSSHEEPQGTKKHSRKKELIQ
GAENSPANGPRKRHARLRQKGSTCQDSPETKAPAEGKTRSRRRAAAYKSTEVAAAGSRQR
QARTDRPVTTAIPLSSL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggtccggagctgcacctggccagccgctacatcaacacggtgtgcgccggg
ctgctcttctcggggaaggtggagaagtctgcggtgagcaagaacccagaggtgccattc
gagagctgcacctacgtgatctcggccaccccccgcggcaaggaggtgaagctgactctg
atgccagtcaaagaggaggaggagagcctgcaactcgctgaggagagtagcccagctggg
caggatccggacagccccccccagcctatggacgtcgtcttccgtttcgggatgtcgggc
agcttcaagctggtgccagaggctgagctgcccaagcacgcccacctgcgcttctacacc
agggagagcccgcgccgcatcctctgctttgtggatttcaggcgctttggcaggtgggag
gtgcaggggacgtggcagccagaccggggcccctgcgttatgctggagtatgagaaattc
agggagaatgtactgaagaacctgtctgacaaggcctttgacaagcccatttgtgaggcc
ctgttaaatcagaagtttttcaatggaatcggcaactatctccgagctgagattctttac
aggttaaggatccctccctttgagaaggcccggacagtgctggaagctctgcagcatcgg
gagcaggaccctgccctgaccttgagcaagaaagtgaagctgaagcgggagaacccagac
ctgttggagctgtgtcactcattgcccatggaggtctttcacctaggggggaaaggctat
gacccagagagctcggatgattttacagcctttcagcaatggctgcggtgctactatgtg
gctggtatgaagtcattgcgagacagcaatggcagaaccatctggtttcagggagagcct
ggaccaatggccccaaaaggaaaaaagtcccacaagaaacacgctcgggggaaagccgac
ttggatgctccaagttcaaaggagacaaagccaccatccaagaggagttccaaagacagc
agcagccatgaggagcctcagggaactaagaaacacagcaggaagaaggagctcatccag
ggagctgagaacagcccagcaaatggaccaaggaagcgacatgccaggttgaggcagaaa
ggctcaacctgccaagattctcctgaaaccaaggctcctgctgaggggaagacgaggagc
aggaggcgggcagctgcttacaaaagcacagaagtggctgctgctggctccagacagagg
caggcaaggactgacaggcctgtcaccactgctattcccctctccagcttgtag
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