KEGG   Gavialis gangeticus (Gharial): 109288786
Entry
109288786         CDS       T07453                                 
Symbol
PATL2
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggn03019]
    109288786 (PATL2)
Messenger RNA biogenesis [BR:ggn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109288786 (PATL2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 109288786
NCBI-ProteinID: XP_019360081
LinkDB
Position
Unknown
AA seq 777 aa
MAGSSDPVVLEDYLLAEDAPLLEEMAEEDEEIDLYNDMTFGLDRDSMEEEVAKAPAPQDK
DPEPSPMDKSIEEGTVMEEDEESKAVEEPGPEAEEKPSILEEMDEAEEEHEGEPGTRLED
YGDIEEEGELGADEHEEEEEEEEEEEEEDEQEEGEQQHHDDRDSKEQNDLGDPAVMRAVH
GKPTLESLDSAVVDSSIGSSWEGYKADDLVLADVWSSSPGSIPSHHMLEDKAILQVLERV
PPTSHMSLDFLGSPVQRGYPGSPGLKRPNFRMMSPKSFPQRFMRQQSPMMPRSLYSPRPF
TPPRRASPLFTPSQSSEYTSPMPFRPMSPNIRTPTQPLGMRFGPMSPSLDPSLFFSPSAG
LQGKFSVPSHMTQLHPQHQRILNQRQQRGQVQSISPKKPWSPKADPYAGLMTLKEKDWVI
KVQMMQLQSENPHLDDYYYQAYYHRLERKQAEEELFGGRSKQEPPKLVTPYIQKMETYDS
VVRIAGSLGQVAMSTCYSPRRAIDAVHHALLEEGAGSQLMKAPPTXLVTFLQMFLQLLDV
EETQQKMTLAPEEQHPRFREKKSHEVGRIFHTLKTGACGTEEEAEDEFLQVLCVRKGKKL
TARLLPHLAREQAEGILVAITRHLPFLMRKDVLDESLPVLYGPLSEMVGKMTFSELIEVL
QELTRPLPDSLELPLAMALKNQFGISLLYSLLSHGEKLLSSDVPLEPQSGDFEKWTDTVF
LVARELSQVPKTSLVEPLVLPSNLLSLFCRYLDKQTIHRLEVKMECASLPSETAMLC
NT seq 2334 nt   +upstreamnt  +downstreamnt
atggcggggagtagcgacccggttgtcctagaagattaccttctggcagaagatgcgcct
ttgctggaggaaatggctgaggaggatgaagagattgacctgtacaatgacatgaccttt
gggttagatcgagactccatggaagaggaggtggccaaagccccagcccctcaagataaa
gaccctgagccaagtcccatggacaagagtattgaagaagggacagtgatggaggaggat
gaggagagcaaggctgtggaggagcctgggcctgaggcagaagagaagccttctattcta
gaggagatggatgaggcagaggaagagcatgaaggggagcctgggactcggctagaggac
tatggtgacatagaggaagagggggagctaggggcagatgagcatgaggaggaagaggag
gaggaggaggaggaagaggaggaggatgagcaggaggaaggggagcagcagcaccatgat
gacagggactccaaggaacaaaatgacctgggagacccagcagtgatgagagcagtgcat
ggcaagcccaccctagagagtctggactccgcagttgtggacagcagcattggttccagc
tgggaagggtacaaagcagatgatttggtgcttgcagatgtgtggtcttcatcccctggc
agcatcccatcacatcacatgctggaggacaaagccatccttcaagtgctggaaagggtc
ccccccacatctcacatgagcctggacttccttggctccccagtgcagagagggtaccca
ggctccccaggactcaagcgtccaaacttcaggatgatgtcccctaaatccttccctcag
cgattcatgcggcagcagtctcccatgatgcctcgctccctgtactcccctcggcccttc
acgccacctcgcagagcttctcctctcttcactcccagtcagagctcagagtacacatct
ccaatgcccttcaggcccatgtcacccaatatcaggacaccaacgcagcccttgggtatg
cgcttcggccccatgtcaccttctcttgacccctcgctcttctttagtccgtcagctggc
ctccaagggaagttcagtgtgcccagccacatgactcagctgcacccccagcatcagcgg
atcctgaaccaacggcagcagcgagggcaggtgcagagcatctcccccaagaagccctgg
tccccaaaagcagacccctatgctgggctcatgactcttaaagagaaggactgggtcatc
aaggtgcagatgatgcagctgcagagtgagaatccccacttggatgactactattaccag
gcatattaccaccggttggagcgaaagcaggcagaggaggagctttttgggggccggagc
aagcaggagcctcccaagctagtcacgccttatatccagaagatggagacctacgactct
gtggtgcgcatagcaggatcactgggccaggttgccatgtccacatgctacagcccccgc
agggccattgatgctgtgcaccatgccctactggaagagggtgctgggtctcagctgatg
aaggctccccccacttaacttgtcacatttctccagatgtttctgcagctgttggatgtg
gaggaaacgcagcagaaaatgaccctggcaccagaggaacagcacccgcgcttccgggag
aagaagagccatgaagtgggccgcatcttccacaccctgaagactggggcgtgcggcact
gaggaggaggcagaggatgagtttctgcaagtgctgtgtgtgcggaagggcaagaagctg
acggcacggctgctgccccacctggcacgggagcaggccgaggggatcctggttgccatc
acccgccacctgccattcctcatgaggaaggatgtactggatgagtcacttccagttctc
tacggccccctcagcgagatggtgggcaagatgaccttcagtgagctcattgaggtcctg
caggagctaactagaccgctacctgactctctagagttgccactcgccatggccctgaag
aaccagtttgggatctcgcttctgtactcactgctgagccatggtgagaaactgctctcc
tcggacgtgcccttggagccgcaaagcggggactttgagaaatggactgacactgtattc
ctggttgccagagagctgtcccaagtgcccaagacctctctggtggagcctcttgtcctc
cccagcaacctcctctccttgttctgccgctacctagataagcagaccatccaccggctg
gaggtcaagatggagtgtgcctcgctaccttcagagactgctatgctatgctga

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