Gavialis gangeticus (Gharial): 109288787
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Entry
109288787 CDS
T07453
Symbol
SNX1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109288787 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109288787 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
109288787 (SNX1)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Macropinocytosis
Sorting nexins
109288787 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109288787 (SNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
Ribosomal_60s
Phage_T7_Gp13
MVD-like_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
109288787
NCBI-ProteinID:
XP_019360082
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MATGSACGSDSGHDLDLGPAERLPPPLPTADSDVEGEDVFTGASKPIVSKRESPPLSPPL
PVTSSSKENGVHVEQDDQDLFADATVELSLDSTQNNQKKEPAKAASPAPPLEVRAVSSSS
RQASKSYEELEEEEQEDKFELTVGVSDPEKVGDGMNAYVAYKVSTQTSLTMFRSKQFSVK
RRFSDFLGLYEKLSEKYSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALER
YLQRVVSHPTMLQDPDVREFLEKEELPRAIGTQALSGAGILKMFNKATDAVSKMTIKMNE
SDIWFEEKLQEVECEDQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALS
RALSQLAEVEERIEQLYQEQVNSDFFILAELLSDYIRLLSVVRGAFDQRMKTWQRWQDAQ
TMLQKKRETEARLLWANKPDKLQQAKEEISEWESRVTQYERDFERVSAVIRKEVIRFEKE
KSRDFRNHVTKYLETLLNSQQQLVKYWEAFLPEAKAIS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggtagcgcctgcggctccgactccggccatgacctcgacctcggcccggcc
gagcgcctgcccccgcccttgccgaccgccgacagtgacgtggagggcgaggatgtcttc
accggcgccagcaaacccatagtatccaagagggaatctcctcccctctctcctcctctc
ccagtgaccagcagctccaaagaaaatggtgttcatgtggagcaggatgatcaggaccta
tttgcagatgctactgttgagctgtctctggacagcacccagaacaaccagaagaaagaa
ccagccaaagctgctagccctgcccctccactagaagtcagagctgtcagctcttcctcc
aggcaagcttcaaagagttatgaggagctggaggaggaagaacaggaagacaaatttgag
ctgacagtaggagtgagtgaccctgaaaaagttggggatggaatgaatgcctatgtagcc
tacaaagtctcaacgcagactagtttaactatgttcagaagcaagcagttctctgtcaag
aggagattcagtgacttcttgggtctgtatgagaagctgtcggaaaagtactcacagaat
ggattcatagtcccaccaccccctgagaaaagcctaataggaatgaccaaagtcaaagtt
gggaaagaagattcctcctctgcagagtttctagaaaaaagacgggctgctttagaaagg
taccttcaaagagtagtcagccacccaaccatgctacaagatcctgatgtcagggagttc
ttggagaaagaagagctgccccgagcaataggtacccaagcactgagtggagcaggaata
ctgaagatgttcaacaaagccactgatgctgttagcaaaatgaccatcaagatgaatgaa
tcggatatatggtttgaagagaagcttcaggaagtggagtgtgaggatcagcgtctgcgg
aaactacatgctgttgtagaaacactagttaaccacaggaaagagctagcactgaataca
gcccagtttgcaaagagcttggccatgctggggagttcagaagataacacagccctgtcc
cgggcactctcgcagctggcagaggtggaggagaggattgaacagctgtaccaggaacaa
gtcaacagtgacttcttcatcctggctgagctcctgagtgactacattcgccttctgtca
gttgtaaggggtgcctttgaccagcgcatgaaaacctggcaaaggtggcaggatgcccaa
accatgctgcaaaaaaagcgggagactgaggccaggctgctgtgggccaacaaaccagac
aagctgcagcaggccaaagaggagatctcagagtgggagtcccgtgtgacacagtatgaa
agggactttgaacgggtttctgccgtcattcgcaaagaagtgatacggttcgagaaagag
aaatcgagggacttcagaaaccatgtgactaaatacctagagacactattaaattcacag
caacagttggtgaagtactgggaagcattcttgcctgaagcaaaggccatctcttaa
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