Gavialis gangeticus (Gharial): 109288812
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Entry
109288812 CDS
T07453
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ggn03037
]
109288812 (USHBP1)
Cilium and associated proteins [BR:
ggn03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109288812 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
KLRAQ
ZapB
Mei5
Motif
Other DBs
NCBI-GeneID:
109288812
NCBI-ProteinID:
XP_019360120
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MPGSRGSRLQGKLDPVAERAEEADVADTDEQDILRYEERITQLLVTITHLHNKVERLQQR
GAREDEEYSDQCSEYTASLPRHAPQPLPPQLPPPREGVGPDMFLALQQVLASLEHTVFAR
RHCALRLAGAGAETGTGGKEWAQVVETLEELERGLGLSPGLEMAAVQAPGERVAELSPEL
GAAETSWYGKEAATLAERNMALRATLGSKEQELSRAQVTLQALQEERDRLQRKVKELQDS
LYQLETPGQAWSPPGSATTPIREAGSPVGEGDPWLLQVRSWSLFPGLWKTFTPPPPGNLL
PSLGPAGHPLPWGHTPATSPSGQTEPQPSGWSLLQLQRGPHGCGQQEVTPVVSPLGYGAA
VRAHPEVSGYPPPTNQDVQPPPAAPAPAPALGCTDLPLLAPQDPLARAQSLLQCLKDHPA
MQPLCRLLPSAPELSSRELDDQLQQLRGCIERLKGLNHLLAGALQECKSDSERLSMLLGQ
HESNSTALRLAAQCSEHRMEALEVLLALARAKLDAGGHAPSAAPAEHASQDAAAVLAEAR
RFLGRAEPDGQEAAGEPGMCGQQSPPSPREEEEEEEEGVLRQYLRQLQAEQAAVEVSLLE
LGCSGPPGAVTRPSDAIRAKVEKAVQASLAALPGERPWPKLDKTQLLQDLAALQESMADV
KTQLHLAEKEKRGLELGTYTLGAQEAAYLLLIEHLQRERDAGSGPASSGSSTSEGSTGSS
GAGEAEGWKAAAVAPRSPQDLERMTLELASALDRSKVLQDQAQVLAASLEQLSVASRVQQ
AQCTGLARDFFQAHSALVLAYRGARRKQEAQLRRLEAQTGAMGERQAQQAHALAQRIRAL
EEQRAAGAETCI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttctcgggggtcccggctgcagggcaagctggacccggttgctgagagggcg
gaggaggccgatgtggcggacacggacgagcaggacatcctgcgctacgaggagcgcatc
acgcagctgctggtgaccatcacccacctccacaacaaggtcgagcggctgcagcagcgc
ggagccagggaggacgaggagtactcggaccagtgctcagagtacacagccagcctgccc
aggcatgcaccgcagcccctgcccccccagctcccgccccccagagaaggcgtcggcccc
gacatgttcctggccctgcagcaggtgctggcatctctggagcacaccgtgttcgcccgg
cgccactgcgcactgcggctcgctggggctggagcggagacgggcacgggcggcaaggag
tgggcccaggtggtggagaccctggaagagctcgagcgaggcctggggctgtccccgggg
ctcgagatggcagctgtccaggcaccgggggagagggtggctgagctgagcccagagctt
ggggcagcggagaccagctggtatgggaaggaagcggccacgctggctgagaggaacatg
gcgctgcgggcaacgctgggcagcaaggaacaggagctgagccgtgcccaggtgaccctg
caggctctccaggaggagcgcgacaggctccagaggaaggtcaaggagctgcaggattcc
ctctaccagctcgagacgcccggccaggcctggagccctcctggctcagccaccaccccg
atcagggaagctggcagccctgttggggaaggggacccctggctgctccaggtgaggtcc
tggtccctcttccccggactgtggaagacattcacacccccgcccccaggaaatctgctc
ccatccctggggcctgctgggcatcctctgccctggggacacactccagccacgtctccc
tcaggccagacagagccacaacccagtggctggagtctcctgcagctgcagcgggggcca
catggctgtggccagcaagaggtcactcccgtggtgtctcctttagggtatggtgctgca
gtgcgtgcccacccagaggtctctggttaccccccacccacgaaccaagatgttcagccc
ccccctgcggcccctgcaccagctccagccctgggctgcacagacctacctttgcttgct
ccacaggacccactggccagggcacagagcctgctccagtgcttgaaggaccacccggcc
atgcagcccctctgccgcctcctcccctctgccccggagctctccagcagggagctggat
gaccagctgcagcagctgcgagggtgcatcgagcggctcaagggcctgaaccacctgctc
gcgggcgccctgcaggagtgcaagagcgactcagagcggctgagcatgctgctggggcag
cacgagtccaacagcaccgccttgcgcctggccgcccagtgcagcgagcaccgcatggag
gccttggaggtgctgctagccctggccagggcgaagctggatgctggggggcacgcccca
agtgcagcccccgcggagcatgcttcacaagacgcggccgccgtgctggcggaggccaga
aggttcctgggcagagcggagcctgacgggcaggaggcagccggcgaacctggcatgtgc
ggacagcaaagcccacccagccccagggaggaggaggaggaggaggaagagggggtgctg
cggcagtatctccggcagctgcaggcggagcaggcggccgtggaggtctccctgctggag
ctgggctgctctgggccccccggtgccgtgacccggcccagcgacgccattcgggccaag
gtggagaaagccgtccaggcgtccctggctgccctgcctggggagaggccctggccgaag
ctggacaagacgcagctgctgcaggacctggcagccctccaggagtccatggctgacgtg
aagacccagctgcacctggcggagaaggagaaacggggcctggagctgggcacctacacg
ctcggcgcgcaggaggctgcctacctgctgctcatcgagcatctgcagcgggagcgggac
gcgggctccggccccgccagctctggcagcagcaccagcgagggcagcacgggcagcagc
ggggcaggggaggctgagggctggaaggcggctgccgtggcaccccgaagcccccaggac
ctggagaggatgacgctggagctggccagcgcgctggatcggagcaaggtgctgcaggac
caagcccaggtgctggcggcctccctggagcagctcagcgtggccagccgggtgcagcag
gcccagtgcaccggcctcgccagagacttcttccaggcgcacagcgcactggtgctggcc
taccggggcgcccgcaggaagcaggaggcccagctacggcgcctggaagcccagacgggc
gccatgggcgagcggcaggcacagcaggcacacgcgcttgcccagcgcatccgggctctg
gaggagcagcgtgcggccggcgccgagacctgcatctag
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