Gavialis gangeticus (Gharial): 109288909
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Entry
109288909 CDS
T07453
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109288909 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109288909 (GLI1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109288909 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
109288909
NCBI-ProteinID:
XP_019360185
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MGSPLDALGPACLEDCTEGDISSPASTGTQDPLLGLLDPREDLEKEEGRAEAEAVYETCC
RWEACARDFDTQEQLVHHINNEHIHGEKKEFVCHWLACSRERRPFKAQYMLVVHMRRHTG
EKPHKCTFEGCHKAYSRLENLKTHLRSHTGEKPYVCEHEGCSKAFSNASDRAKHQNRTHS
NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDTGLGRAGVPLGPPIEAL
PERDGGRRDEAKRLPPDATLKPQPSPGGQSSCSSERSPLGTDSGVEMNAPPGGSCEDLSA
LDEAVPEPMGASGLAALRRLESLRLDQLHQLRRPPPARAPTLPALPAPPGEMPGLCGPLP
GAPHRRLLEMSGDGASERRASTTSTVSSAYTVSRRSSATSPFLRPGEAGGVPNGIDTYDP
VSPDASGEAGGLPGLTPAQQYRLKATYAAATGGPPPTPLPGAGLVGPGGFPGTSLRRHST
NEYPGYGLAPGTGPRRASEPAQAPGQLPPATTRVPRYRSAGAVRAPDASLTPPGFTPCTP
RISEQVFLESLGMEGLLDAEPFLGYPEQGFPCPAQGPALPSETPYGTPHRTGEAGLAPPE
YSLPSCQHVRGSLPAPWDQPGCTMDVSSGPPGLAGTMGHSAPYSTCDPPRLAGTCLGGSF
AGGPRFPPAPVKAEHFAAPSPALPPCPTAKLPTPYGHTCSTASGGYAGEGVPGARRPTTP
TLQVKEMMVRSYVQSQQALLWGEQRGGPMPCPPQPGPRYPGYPH
NT seq
2293 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccccctagacgctctgggccctgcgtgcctggaagactgcactgagggcgac
atctccagcccggcctctacgggcacgcaggacccgctgctggggctgctggacccccgg
gaggatctggagaaggaggagggccgggctgaggccgaggccgtgtacgagacctgctgc
cgctgggaggcctgtgcccgcgacttcgacacccaggagcagctcgtccaccacatcaat
aacgagcacatccacggggagaagaaggagttcgtgtgccactggctggcctgctcgcgg
gagcgccgcccctttaaggcccagtacatgcttgtggtgcacatgcggcggcacacgggg
gagaagccccacaagtgcacgttcgaaggctgccacaaggcctactcacgcctggagaac
ctcaagacccacctgcgctcgcacacgggtgagaagccgtacgtgtgcgagcacgagggc
tgcagcaaggccttctccaacgcctccgaccgtgccaagcaccagaaccgtacccactcc
aatgagaagccatacgtgtgcaagctgccgggctgcacaaagcgctacacggaccccagc
tccctgcgcaagcacgtcaagacggtgcacggacccgatgcccatgtcaccaagaagcac
cggggggacacagggctgggtcgggccggggtccccctgggaccgcccattgaggcgctg
ccggagcgggacgggggccgacgtgatgaggccaagcggctgccccccgacgccaccttg
aagccgcagcccagccctggggggcagtcgtcgtgcagcagtgagcggtcgccactgggc
acggacagcggcgtggagatgaatgcgccgcccgggggcagctgcgaggacctgtcggcg
ctggacgaggcggtgccagagcccatgggcgcctcggggctggcagcactgcgccgcctg
gagagcctgcgcctggatcagctgcatcagctgcgccgccccccacctgctcgcgccccc
acgctgcctgcgcttcccgcaccccccggggagatgccagggctgtgtggccccctgcct
ggtgccccccaccgccgcctcctggagatgtcaggtgatggagccagtgagcgccgggcc
agcaccaccagcacggtgagctcggcctacaccgtgagccgccggtcctcggccacctcc
cccttcctgcgtccaggcgaagccgggggggtcccgaacggcatcgacacttacgacccc
gtgtcccccgatgccagtggcgaggccgggggactgccggggctgacgccggcccagcag
taccgcctcaaggccacctacgccgcggccacgggtggccccccgcccaccccgctgcca
ggcgcgggcctggtggggcccggcggcttccctggcacttctctgcgaagacacagcacc
aacgagtacccgggctacggcttggctcccggcaccgggccccgccgggccagtgagccc
gcccaggcgcccgggcagctgccccctgccaccacccgtgtgccacggtaccggagcgca
ggcgctgtccgggcccccgacgccagcctgacgccccctggcttcaccccctgcacgcca
cggatcagcgagcaagtcttcctggagagcctgggcatggaggggctgctggatgcagag
cccttcctgggctaccctgagcaaggcttcccctgcccggctcagggccctgccctgccc
agcgagactccctatggcaccccacatcggaccggggaggctggcctggcaccacccgaa
tactccctgccctcttgccagcacgtgcggggcagccttcccgcgccatgggaccagcct
gggtgcaccatggacgtgagctccgggccaccgggcctggctgggaccatgggccacagt
gccccatacagcacctgtgacccaccccggctggcgggcacgtgcctggggggcagcttc
gcggggggcccgcgtttccccccagcccctgtcaaggccgagcactttgcggcacccagc
ccagccctgccaccctgccccactgccaagctgcccacgccctacgggcacacctgctcc
acagccagcggaggctatgcaggtgagggggtgccgggtgctcgccgccccaccacgccc
acgctgcaggtcaaggagatgatggtgcgaagctacgtgcagtcccagcaggcgctgctg
tggggggagcaacgggggggccccatgccatgcccaccccagcccggcccccggtacccc
ggctacccccatg
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