Gavialis gangeticus (Gharial): 109288944
Help
Entry
109288944 CDS
T07453
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn00260
Glycine, serine and threonine metabolism
ggn00630
Glyoxylate and dicarboxylate metabolism
ggn00670
One carbon pool by folate
ggn01100
Metabolic pathways
ggn01200
Carbon metabolism
ggn01230
Biosynthesis of amino acids
ggn01240
Biosynthesis of cofactors
ggn04981
Folate transport and metabolism
Module
ggn_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
109288944 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109288944 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109288944 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
109288944 (SHMT2)
Enzymes [BR:
ggn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
109288944 (SHMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
109288944
NCBI-ProteinID:
XP_019360251
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MAVPRALRLAGPLGRWWPAAGLGRRAQHGAAAAAAGSGEVPGWTGQESLAQSDPEVWDLL
RQEKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGQRYYGGAEVVDRVERLCA
QRALDAFGLDPACWGVNVQPYSGSPANLAAYTAVLHPHDRLMGLDLPDGGHLTHGYMTDT
KRISATSIFFESMPYKLNPATGLINYEQLEATARLFRPRLIIAGTSAYARLIDYARIKKV
CEEVKAYLLADMAHISGLVAARVIPSPFEHADLVTSTTHKTLRGARSGLIFYRKGVRSVD
PKSGRETLYDLEERVNFSVFPSLQGGPHNHAIAAVAVALQQATTPAFREYSQQVLKNAKA
MAEALLKRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDRSALT
PGGLRLGAPALTSRRFCEGDFEQVVAFLDEGIGIALDAKKQTKKLLEFKSFLLSDEGTRA
RLAELRQRVETFARAFPMPGFADH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccccgcgcgctgcgcctggcggggcccctggggcgatggtggccggcagca
ggcctggggcggcgggcccagcacggtgcggccgcggctgcggctgggtctggggaggtg
cctggctggacggggcaggagagcctggcacagagcgaccctgaggtctgggacctgttg
cgccaagagaaagaccggcaatgccgcgggctggagctcatcgcctctgagaacttctgc
agccgcgcggcgctggaggcgctgggctcctgcctcaacaacaagtactcggagggctac
cccgggcagaggtactacgggggggcagaagttgtggaccgtgtggagcggctgtgcgcg
cagcgggcgctggacgccttcggcctggacccggcgtgctggggtgtcaacgtgcagccg
tactcaggctccccagccaacctggccgcctacactgccgtgctgcacccccacgaccgc
ctcatggggcttgacctgcctgacggtggccacctgacccatggctacatgacggacact
aagcgcatctcggccacctccatcttcttcgagtccatgccctataagctcaacccagcc
acagggctcatcaactacgagcagctggaggccacggctcggctctttcgcccacggctg
atcatcgctggcaccagtgcctacgcccgcctcatcgactatgcccgcatcaaaaaggtg
tgcgaggaggtgaaggcctatctgctggctgacatggcccacattagtgggctcgtggct
gcccgtgtgatcccatcgcccttcgagcacgcggacctggtcaccagcaccacccacaag
accctgcgaggggccaggtctgggcttatcttctaccgcaagggcgtgcggtcggtggac
cccaagtcgggccgggagacgctgtacgatctcgaggagcgtgtcaacttctctgtcttc
ccctcgctgcaggggggaccccacaaccacgccatcgctgctgtggccgtggccctgcag
caggccaccacacccgccttccgggagtacagccagcaggtgttgaaaaatgccaaggcc
atggccgaggcccttctgaagagggggtacacccttgtctcaggcggcactgacaaccac
ctggtgctcgtggacctgcggcccaagggcatcgacggggctcgggctgagcgggtgctg
gagctggtgtccatcacggccaacaagaacacatgtcctggcgaccgcagtgccctcacg
cccggcggcctgcgccttggggcccctgcgctgacctcccgacgcttctgcgagggcgac
tttgagcaggtcgtcgccttcctggatgagggcatcggcattgccctggatgccaagaag
cagaccaagaagctcctggagttcaagtccttcctgctgagcgatgagggcacccgggcc
cgcctggccgagctgcggcagcgcgtggagacctttgcccgcgccttccccatgcccggc
ttcgccgaccactga
DBGET
integrated database retrieval system
