Gavialis gangeticus (Gharial): 109288983
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Entry
109288983 CDS
T07453
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109288983 (TMF1)
Membrane trafficking [BR:
ggn04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109288983 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
109288983
NCBI-ProteinID:
XP_019360328
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEDGPWVEPARPDGACEANSLTSGGWDTS
SWGLNSNAEPQTQLISTTAITKPVRRTVVDESENFFSAFLSPVDVQSIQKSPVVFKPPTK
SQWPKEEVNSTLKECIHTSQPDASVVTEPETKDSSVITLVDLENLDIPQEKLEESSAIKN
DSEHEETANESSAKAVSTLDLKVPEAAVNVKSGIRKDGPESGPNSPAQSLTPEAKDVSLE
AKEQKNEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHL
MQTSFQLLSTSACTEYNRLDDFQKMTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDEL
SGRACASASITVGSSTLKTETVDSVKNKSEEELNEMLLVHPEETEMEESGRSATPVNSEQ
PDILVAAAQTDEEEMVKVECTVQQQDAETLPELDCEKEELRKMVDSLTEKLGKRETQLLS
VSKEKACLEEAYDNLKDEVIRMKEESSSISSLKEEFAQRIADAEKKVQVACKERDTAKKE
VKTVKEELATRLNCNETAELLKEKDEQIKGLMEEGEKLSKQQLQNSNIIKKLRAKEKERE
NTNAKQNKKIKELEEELQLLKQVLDGKEEVEKQHRENIKQLNNVGERQEKDLSRLQVEVE
ELEEKNRSIQTALDSAYKELAELHKANATKDSEAQEAALSCEMKAKEELGLALEKAQEEA
RQQQEVLANQVADLRLALQRAEQQAARKEDYLRQEISELQQRLQEAENRNQELSQSVTSA
TRPLLRQIENLQATLGAQTSTWEKLEKNLSDRLGESQSLLAAAAERERAATEELLSNKVQ
MSATESQNSLLRQENSRLQAQLEVEKARLKKLENENNRYEVELENLRNEYAKTLEEAKKE
KTLLATQLEMEKMKVEQERKKAIFVQEAAKEKERKSFSLSTMETVSSTPTLSRSSSISGV
DVAGLQASFISQDDPHDHSFGSVSASGNNLYDAIRMGAGSSIIENLQSQLKLREGEISHL
QLEIGNLEKTRSIMAEELVKLTNQNDEFEEKVKEIPKLRAQLKDLDQRYNTILQMYGEKA
EEAEELRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcgtcgcagttgtccagtttcgccaagcaggcgctgtcgcaggcg
cagaagtctatcgaccgcgtgctggacatccaggccgaggacgggccctgggtcgagcct
gcccgccccgacggcgcctgcgaagcgaattcccttacaagtggaggatgggacacttct
tcctggggattgaattctaatgctgaacctcaaactcagcttatatctacgacagcaatc
accaaacctgttaggaggacggtagtagatgaatctgaaaacttcttcagtgcctttctc
tctccagtggatgttcagagcatacagaaaagtccagtggtgtttaaacctccaaccaaa
tctcagtggcccaaagaagaagtgaacagcactttaaaagaatgtatccacaccagtcag
ccagatgcatcagtagtaacagagccagaaacaaaagactcctctgtaattaccctagtg
gacttggaaaaccttgatattccccaggagaaattagaagagagttctgcaattaaaaat
gatagcgagcatgaagaaaccgcaaatgaaagttcagctaaagcagtctctactctagat
ctgaaagtacctgaagccgctgtgaatgtgaaatccggcataaggaaggatggaccagaa
agtggacccaacagccctgcacagtctcttacaccagaggcaaaagacgtgagcttggaa
gccaaggagcagaaaaatgaggacagacaaagcaatacaccttcaccacctatcagcact
ttctcctcgggcacatccacaactagcgacattgaagttttggaccatgagagtgtaata
agtgagagctccgttagttccagacaagaggcagcagattcaaaatcgagccttcatctg
atgcagacttcctttcagctcctatctacatcagcttgcaccgagtataatcgtttagat
gactttcaaaaaatgacagagagttgttgttcctctgatgcatttgaaagaatagactcg
ttcagtgtgcagtcgttagacagccgaagcgtaagtgaaatcaactcggatgatgaatta
tccggcagggcttgtgcttcagcatctattacagttggctcctcgacactgaagaccgag
acagttgactctgtgaaaaataaatctgaagaagaattgaatgagatgcttcttgtgcat
ccagaggaaactgaaatggaggagagtgggagaagtgcaacccctgttaattctgagcag
ccagatattttggttgctgcggctcaaacagatgaagaagaaatggtaaaagtggagtgt
acggtgcagcagcaagatgctgaaacgttgcctgaactggactgtgaaaaggaagagctt
cgcaagatggttgattcgctgactgagaagctgggaaagagggaaacccagttattgagt
gttagtaaagagaaggcatgcttagaagaagcttatgacaacctgaaagatgaagtgatc
agaatgaaagaagagagcagtagtatttcatctcttaaagaggagtttgctcagcgtata
gcagatgctgaaaagaaggtccaagtagcatgcaaagagagagatacagcaaaaaaggaa
gtaaagactgttaaagaagaattggctactagattaaattgtaacgaaacagctgaacta
ctgaaggagaaagatgaacaaatcaaaggacttatggaggaaggagaaaagctttcaaaa
cagcagctacagaattccaacatcattaagaagttgagagcaaaagagaaagagagggaa
aacactaatgcaaaacagaataaaaaaattaaggaattagaagaggagttacagcttttg
aaacaggtgcttgatggcaaggaggaagttgagaagcagcatcgagagaacattaaacaa
ctcaacaatgtgggagagcggcaagagaaggatcttagcaggcttcaggtggaggtggaa
gagcttgaagaaaagaaccgaagcattcagacagcacttgacagtgcatacaaagagctt
gcagagcttcacaaagccaatgctacaaaggacagtgaggcacaagaagcagcgttaagt
tgtgaaatgaaggcgaaagaagaacttggtttagcgctagagaaggcccaagaggaagcc
cggcaacaacaggaagttttagcaaatcaggtggcagacctgaggttggcattgcaacgg
gcagaacagcaagcagcaagaaaggaagactatttacgccaagaaatcagtgagctacaa
cagagactccaagaagcagaaaacaggaatcaagaactaagtcaaagtgttacatctgct
acaaggccacttctccggcagatagaaaatctgcaagcaacgctaggagcccagacctcc
acatgggaaaagttagagaagaacctttctgacagacttggtgagtctcaatctctactg
gcagcagcagctgagagagaacgtgctgctactgaagagcttctttccaataaagttcag
atgtctgccactgaatcgcaaaacagcctgctgaggcaagaaaacagtcgccttcaggct
cagctggaagtagagaaagccagactcaagaaactggaaaatgaaaacaataggtatgag
gtcgaactagaaaaccttagaaatgagtatgcaaaaacccttgaagaagcaaagaaagaa
aagacactgttagctactcagttagaaatggagaaaatgaaagtcgagcaagaaaggaag
aaagccatttttgtacaagaagcagcaaaggaaaaggaacgcaaatcattttcattgtcg
acaatggaaactgtttcgagtactccaactctgtcacgctcaagttcaataagtggagtt
gatgtggcagggcttcaggcttccttcatctctcaggatgatcctcatgaccattcgttt
ggatcagtgtctgcaagtgggaacaatctttatgatgctataagaatgggagcaggttca
agtatcattgaaaacctgcagtcacagttaaaactaagggaaggagagatttctcaccta
cagctggaaataggaaaccttgaaaaaactcggtcaataatggctgaagaactggttaaa
ttaactaatcaaaatgatgaatttgaagaaaaagtgaaggagataccaaaattgcgggct
cagctaaaggatttggatcaacgatacaacacaattctccagatgtatggggagaaagca
gaagaggcggaagaacttagactggatcttgaagatgtgaaaaacatgtacaagactcag
atagatgaactcttaaaacaaagacaaaactaa
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