KEGG   Gavialis gangeticus (Gharial): 109289187
Entry
109289187         CDS       T07453                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03013  Nucleocytoplasmic transport
ggn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109289187 (CASC3)
   03015 mRNA surveillance pathway
    109289187 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggn03019]
    109289187 (CASC3)
Messenger RNA biogenesis [BR:ggn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109289187 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 109289187
NCBI-ProteinID: XP_019360698
LinkDB
Position
Unknown
AA seq 652 aa
MNMYLENIQINSLLQNRVESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESSKVELKQDG
NDSSESTAKAEKGEEKPDSKGTVTGERQSGDGQESTEPIENKVGKKVPKHLDDDEDRKNP
AYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIAL
YGYDIRSAHNPDDIKPRRMRKPRFGSPPQREPNWSHERQNKPPRYQGSDNTPAPPRTFIS
RSSAGTGRMPPPRTYPRAGGYKENRPSYRAAEANGQHHSRNSEQAKHESSYRSKRVEQAP
ARDPSPEAEVATVHNSPVKKEEIVLESQTTTTDAVQPPPDRPIEKKSYSRARRTRNKVGE
TGKLADEVPPPEGPMPVSPKPVQVETSPPPAKTGSWETPVESNMDGLEQEMTQLNLTEQN
WTPGQPQFIQPRELRSIPNHMHMGTGPPPQFNRMEEMAVQGSRAKRYSSQRQRPPVPEPA
PPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMG
NPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPNTQ
AQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPELLVAGCKQGSS
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgaatatgtacctggaaaatattcagattaatagtttgctccagaacagagtggaaagt
gaagacggcatcgaaggagatgctgttctctcagactatgaaagtgcagaggactcggag
gctgaggaagaggattacagtgaggaggaaagctcgaaagtggaactgaagcaggacggc
aatgattctagtgagtccactgcaaaagcagagaaaggggaagagaaacccgattccaaa
ggcactgtgactggcgagagacaaagcggggatgggcaggagagcactgaaccgattgag
aataaagttgggaaaaaggtccccaagcacctggatgatgatgaggatcggaagaatcca
gcttacatccctcgcaaagggctgttctttgagcatgatctccgaggacagacccaggaa
gaggaagtgaggcctaaaggtcgccagagaaaattatggaaagatgagggccgctgggaa
catgataaattccgggaagatgagcaagctccgaagagcaggcaggagctaatagctctc
tacggctatgacatcaggtctgctcacaacccagatgacatcaagccaaggaggatgcgc
aagccgaggtttgggagccctccacagcgagagccaaattggtcccacgagaggcaaaac
aagcctccaaggtaccagggctccgacaataccccagcaccaccacgaacattcatcagc
cggagttctgcgggtacagggaggatgcccccacccaggacctatccaagggcaggtggc
tacaaagagaatcgccctagctatcgagctgcagaagcaaatggccagcatcactctcga
aacagtgagcaggctaaacatgaaagcagctaccggtcaaagcgtgtggaacaagcccca
gcaagagacccttcacccgaggctgaggttgcaactgtccacaacagccctgttaagaag
gaggagattgttttggaaagccagaccacaacaacagatgctgtccagccacccccagat
agacccattgaaaagaagtcttattctcgggcaaggagaaccaggaataaagttggagag
acaggaaagctggctgatgaagtgccacccccagaggggccgatgcctgtgtctccaaaa
cccgtgcaggtagagacatccccaccaccagcaaagaccggaagctgggagaccccagta
gaatccaacatggatggacttgaacaagaaatgacacagttgaatctaactgagcagaac
tggaccccagggcagcctcagtttatacaacctcgggaacttaggagtattcctaatcat
atgcacatggggactggaccaccacctcagtttaacaggatggaggaaatggcagtgcag
gggagtcgtgcaaaacgttattcatcccagcgtcagagacccccagttccagagcctgca
ccccccatgcacatcagcattatggaagggcactattatgatccactacaattccaggga
ccaatctatacccacagcgagaaccctgccccgttgcccccccagggcatgattgtacag
cctgaaatgcatctcccccatccaggtttacatccacatcagacgccagcacctatgggg
aaccctggtttataccctccacctgtctccatgcctcctgggcaacccccaccacagcag
ctacttgcacccacctatttctcccctcctggggtcatgaattttgggaatcctagctac
ccctaccccccaggagcgctcccgccaccacctcctccccatctgtatcccaacacccag
gcccagtcccaagtatatggaggggttacctactacaacactgtccagcagcaggtacag
ccaaaaccttctccaccgcgaagaacatcacagcctgtgaccatcaagcccccaccccct
gagcttctcgttgcaggttgtaagcagggctccagttaa

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