Gavialis gangeticus (Gharial): 109289271
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Entry
109289271 CDS
T07453
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109289271 (PKD1L2)
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109289271 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Gal_Lectin
Ion_trans
Lectin_C
GPS
PKD
Abhydrolase_9_N
AGA2
PKD_4
DUF4458
Motif
Other DBs
NCBI-GeneID:
109289271
NCBI-ProteinID:
XP_019360809
LinkDB
All DBs
Position
Unknown
AA seq
2473 aa
AA seq
DB search
MWLLLAVLYSFLLGLAAEEVAVEEGIPCSKYQVAFNRSCYEFVRLPRAFTNAQSWCERGG
GHLVFIENEETQEFLQKHISKDREWWIGLTMDSTLNETSEGSIMWLDTSNISYSHWHQDQ
PSLFSAACGHILKNTGYEWGVTENCSQEFDFVCEFESGQSIACDNSNATVQCGSGEVIQI
DDSFYGRKTPHYCVLETPLQFDTDDDCSWTSVKDEVAGQCHGLQACQVAADGTFFGDPCP
TLGGYLSVQYHCMEGLQLTVTDTCFIFENITVSLKWLLSPYSGNLSCIISTGDGQTIDPY
YPLTLSSNVTHKYTSPGEFTVFVECTTSEWHVTAQKRVTVQDKMDQLSITGCYSQYGSGN
SSHCWTLYGETLWIQVELNGGSGVTYTVLADNMTLIESTAKTGIIPYNLTLDSTSQQLLG
LGIHLLAILASSNTTISKVSESLTVHLVEPISGLQASLASHTLEMGKDLEINVSVARGVP
DKLKFEVVGSSETYSHQKDYLKGEPGIYRVPIHSEGTFLVKVLAMNAFSNMSMDIGSITV
SANNSLKEDAAQDENISKENTRKTTDKQRNKISIKPSRHVDPFTTVMLGWPDDSESLSFT
WSCGACWPGWNDCMEQQVIPTNHSQVKIPPACLPPPNSAVTVKVTVRNHSKEERQDEQCL
YVTAKQRLHLDIRCETNCKPVNASEEVVLSVTSQKDPEVMRYNWYLDNTFHAKPPPLPAA
CTLNGFRQSSLMLLPSNRSALVLNSSFLQTHGDAFQIKVIALTQHEYGEGTHIVSMVAAP
GVPACAISPEEGSVLTSFTISCSTSCSKDSCLPAHPSLFTYCFYLKSNSLLHCGPDPELS
SIYLPLGEEENNFILHVTVIVSNSFGDTVHTNATVKVTHEELDNGNQTLHAIVSEKTNTI
LKNGNNSMSLFQLYKSVSSVLNQETQQETYNASLRTDTRKELRELMLATLSAVNVTSMQT
ALKMSEVLKEITHRSEELSSSAQVEASNTLKDVSESLLRVNMEDSEDDQKRKEAASYLFN
AVSNVLEASVHNSTGATSPPEAEKVLPACLVSDKLLNTVENLQSAFLFGKLPDDDPVVLA
TPSVAMYINRLQTDSMDGTSIRVSSSTSASFTLPSASSLSVSGDDDDTLDIRMVSFAVNP
FVSSDTSLEISGAVGGLSLTSSNGLVIPVNDLPENIEIMLPRLPAIQEDRSLLNLGNFSA
FQVNITSENTSLVVHLEPEQDIPLVLYLAYGYCPNETNYDIKTHLPHTKMTGDTSSTWVL
SPEELTFGEGSYYFLVKQDMEMDSTASSDLTVAVTCFVSQCVFWDELQGNWNSYGCHVGP
KTTPISTQCLCNHLTFFGSSFFVTPNAIDVSKTVELFGTFVDNPVVVTTVGCIFLVYVLV
LIWARRKDIQDNAKVKITVLEDNDRFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLEGES
EPHHLMDPDTEVFERGGVDVFLLCTLFPLGELQRIRLWHDNSGNSPSWYVNRVLVHDLAW
DQKWYFLCNSWLAIDVGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFRDGHIWYSIFSR
SPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESS
LLMFPINLLIVQIFRNTRPQPAQQQKEKKPGKSGRVSPSLPPPPQAMQSISLTPEAVIKD
IKRIANSLFKTLKTPLPSSETVLGKSADINMLLALVEDIICQQNQTGREFYDESKKKDDP
IVITLGSVDIQEKTRSPTPEKGMTDRLKHNDYNRYLYMQLQHVEMELELLGPYKFQKPQS
YTQAVRQVQHMKSLLESQICSSGSINGKKVSSSKGLPWWFVFIGWFLIAATSGVSGFFTM
LYGLHYGKENSIKWLISMAISFFESLFITQPLKVLGFAAFFALVLKKMEQEDEENTAIDG
SLSAPGDSNPLFGARRDSRSNIYHPPPMTDIEKMKRNHIKEQKAFALIREILAYLGFLWM
LLLVAYGQRDPSSYYLNKHIENSFTDGFRDVYSYQDFFTWARTTLVNNLYGSYQGFITDG
NSKLVGSARIRQVRVKGDTCPIAPKLQHSVQECHAPYSLQTEDTSDYGERWNISAFDNSS
DFSSAWQYQSQSKLRGHPIWGKLAIYRGGGYVVHLGTDLKNATRVLQYLFSNIWLDTFTR
AVFIEFTVYNANVNLFCIISLMFETNALGAFFTHAELQSIRLYPYTDGLHIFVVAAEVIY
FLFVVYYMVIQGKLMRALKWRYFHSKWNLLELAIILISWSTLSVFVNRTILGARDISYYQ
KHKDECVSFNETATADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLKRAWGDISG
FIIVIAIMFLAYSIATNLIFGWKLHSYKTLFDSAETMVSLQLGIFNYEEVLDYNPVLGSF
LIGSCIIFMTFVVLNLFISVILVAFSEEQKYYQASEEEEIVDLMLMKLFSFLGIKCKKEQ
TTDSEELKELAST
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttctcctcgctgtgctctactctttcttgctcggcttggctgcagaggaggtt
gctgttgaagaggggataccttgctccaagtaccaggtggctttcaaccgctcgtgctat
gaatttgtgagactcccacgcgctttcaccaatgcccagagctggtgcgagagaggaggg
gggcatctcgtcttcattgaaaatgaggaaacccaagagttcctgcagaaacacatctcc
aaggacagggagtggtggataggactgactatggactctactctgaatgaaacctcagaa
ggatcaattatgtggttggacacttcaaatataagttacagccactggcatcaggaccag
ccatctctcttctcagccgcatgcgggcacatcctgaagaacactggctatgaatggggc
gtcactgagaactgcagccaggagtttgactttgtctgcgagtttgaatctggccagagc
atcgcttgtgataactccaatgccacggtgcagtgtggctcaggagaagtcattcaaatt
gatgacagtttctatgggaggaagacccctcattactgtgtactggagactcctcttcag
tttgacacagatgacgactgtagctggaccagcgtcaaggatgaagtagcagggcagtgt
catggactgcaggcatgccaggtggcagcagatgggaccttctttggtgatccttgccca
actttggggggctatttgtctgtgcaataccactgcatggaaggtctgcagctgaccgtg
acggatacatgctttatctttgaaaatatcacagtctctttgaaatggctgctctctccc
tattctggcaacctctcctgtataattagcaccggagatggacaaactattgatccctac
taccctcttaccttgtccagcaatgtaacgcataaatatacatctcctggagagttcact
gtgttcgtggagtgcacgaccagcgagtggcatgtaacagcacagaaacgcgtgactgtt
caggacaagatggatcaactcagcattacagggtgctatagccagtatggatcagggaac
agttctcactgctggacactatatggggaaacgttatggatccaagtggaacttaatgga
ggcagtggagtgacctacactgtcttagcggataacatgactctcattgagtccactgca
aagacagggatcatcccttacaacctgacgcttgacagcacctctcagcagctccttggc
ctggggatacacctactggcaattctggcatccagcaacacaacaatctcaaaggtctct
gagagcctcactgttcacttagtggaaccgatatctggtcttcaggcttcattagcttct
cacactctggaaatgggaaaagacttggagatcaatgtctctgtggctcgtggtgtacca
gacaagctaaagtttgaagtggttggctccagtgaaacgtattctcaccaaaaagactat
cttaaaggagaacctggaatatatagagttcctattcattcagaaggtacttttctggtc
aaggtgctggccatgaatgccttctcgaacatgagcatggatattgggagcatcacagtg
tcagccaacaattctcttaaagaagatgctgctcaggacgaaaacatatccaaagaaaat
acccgaaagacaacagacaaacaaagaaataaaatatccattaagcctagtcgccacgtg
gatcccttcaccacggttatgctcggctggccagatgacagtgagagcttgagcttcaca
tggtcctgtggggcctgctggcctggctggaatgactgcatggagcagcaagtcatcccc
accaaccacagccaggtgaagatcccacctgcctgcttgcctcccccgaactcggcggtg
accgtgaaagttacagtgaggaaccacagcaaggaagagaggcaggatgagcaatgtctg
tatgtgacggcaaagcaacggctgcacctggacatcaggtgtgagacaaactgcaagcca
gtaaatgctagtgaagaagttgttttgagtgtcaccagccagaaggacccagaggtcatg
cgctataactggtatttggacaacacgttccacgcaaagcctcctccgctccctgcagcc
tgcactctgaatggtttccggcaaagctcattgatgctgcttccgagcaatagatctgca
ttggtattgaacagctcctttctgcagacacatggagacgcgttccagattaaagtcata
gcactgactcagcatgaatatggtgaaggaactcacattgtcagcatggtggctgcacca
ggagtgccagcctgtgctatatcccctgaggaggggtcggtgctcaccagtttcaccata
tcctgcagcacctcctgctcgaaggactcgtgcctgcctgcgcaccccagtctgttcaca
tattgcttctatctgaaatcaaattctctgttgcactgcggcccagatcctgaactctca
tccatttatcttccacttggagaagaggaaaacaacttcattttacatgtcacagttatt
gtcagcaatagctttggtgacacagttcatactaatgctacagtcaaggttacacatgaa
gaactggataatgggaaccagaccctgcatgccattgtatctgagaaaacaaacaccatc
ctaaaaaatgggaacaacagcatgtccctgttccagctgtacaaatcagtatcttcagtc
ctcaatcaggagacccagcaagagacctataatgcgtctctgcggacagacacccggaag
gagctgagagagctgatgctggcgactctgtctgctgttaacgtaacatcaatgcagact
gctcttaagatgtcagaggtcctgaaagagatcacacacaggagtgaggagctctcctcc
tcagcccaggtagaagccagcaacacgctaaaagatgtcagtgaatccctgcttagggtg
aacatggaggacagtgaggatgaccagaagcggaaggaagcagccagctacctatttaat
gcagttagcaatgtgctggaagcgtctgtccataacagcactggggctacatcaccaccg
gaggctgaaaaggtgcttcctgcttgtttggtgtcagacaagctgttgaacactgttgaa
aatctgcagagcgccttcctgtttgggaagctaccagatgatgaccctgtggttctggct
actccctctgtggcaatgtacataaacaggttacagacagacagcatggatggtacatcc
attcgtgtctccagttccacctctgccagttttactctgccatctgcctcttccctaagt
gtctcaggagatgatgatgacactctggatataaggatggtgagctttgcagtgaatccc
tttgtatcaagtgataccagtcttgaaatcagtggagctgtgggaggcctaagtcttacc
agctcgaatggactggtcataccagtcaatgaccttcctgaaaacattgagataatgcta
ccaaggcttccagcaattcaggaagacaggagccttctgaatctgggcaattttagtgct
ttccaagtcaatattacatctgaaaatacatctctagtggtccacctagaacctgaacag
gatattccactcgttctctacttagcatatggctattgtccaaatgagactaactatgat
ataaaaactcatttgccccatacaaaaatgactggagatacgtcaagtacctgggttctc
agcccagaagaactcacttttggagaagggtcttactattttttggtgaaacaagacatg
gaaatggattctacagccagcagtgatttaactgtagcagtcacttgctttgtatcccag
tgcgtattctgggatgagcttcaggggaactggaatagctatgggtgccatgtaggacca
aaaacaacccccatcagtacccagtgcctttgcaaccacctcaccttctttgggagctcc
ttctttgtcacacccaatgccattgacgtcagcaaaacggtagagctgtttggcactttt
gtggacaaccctgtggtggtgacgactgtgggctgtatctttttagtctatgtgctagtg
cttatatgggctcgaagaaaagacatccaggataatgccaaggtgaagatcacagtgctg
gaggacaatgaccgctttgctcagtatcgttatcttgtgacagtttttactgggcaccgt
cgaggggcagccacaacttccaaggtgactctcaccctatatggcctggaaggagagagt
gagccccaccacctaatggacccagacacagaggtctttgaacgtggaggagtggatgtt
ttcctgctctgtactctgttccctctcggggaactgcagcgtatcaggctgtggcatgat
aattcaggaaacagcccatcctggtatgtgaatcgcgtgctggtccatgacctggcttgg
gatcagaaatggtattttctctgcaactcttggctggccattgatgttggggaatgtgtc
ctggacaaagtgttcccagtagctactgaacaggacatgaagcaattcagtaacctgttc
ttcatgaagacctcaaagggcttccgcgatggacacatctggtactcaatcttcagccgt
tccccacggagctccttcacacgagcacagagggtatcgtgctgcttctccctgttgctc
tgcactatgctgaccagcatcatgttctggggggtgcccaaggatccagctgagcagaag
atggacctaggcaaaatcgagttcacatggcaggaggtgatgattggctttgagagctcc
ctcctcatgttccccatcaacctgctcatcgtgcagatcttcaggaacacccggccccag
ccagcacagcagcagaaggagaagaaaccagggaaaagtggtcgagtgtctcctagtctt
cccccaccccctcaagccatgcagagcatctcactcactccagaggctgtgataaaggat
attaagagaattgccaattcattgttcaaaacactgaagactccactaccctcttcagaa
acagtgctgggaaaatctgctgacatcaacatgcttttggctttggttgaggatatcatc
tgccagcagaaccaaactgggcgagagttttatgatgagagtaagaagaaggatgatcct
atcgtcattacattaggctctgtggatatccaagaaaaaacaagaagtcccaccccagag
aaagggatgactgaccgactgaaacacaacgattataaccgttacttgtacatgcagctc
cagcatgtagagatggagctggaattgctggggccttacaaatttcagaagcctcagagt
tacacccaggctgtaaggcaggtccagcacatgaaaagcctgctagaaagccagatctgc
tcttcaggctccatcaatggcaagaaagtttcctcttccaaagggctgccatggtggttt
gttttcataggctggttccttatagctgccaccagtggagtgtctggtttcttcaccatg
ctctatgggctgcattacggcaaggagaactcaatcaagtggctgatctccatggccatc
tccttctttgagagccttttcatcacccaacccttaaaagtgctaggatttgctgctttc
tttgctctggttctgaagaagatggaacaggaagatgaggagaacacggccattgatgga
tcactgtctgctccaggtgactcaaatcctctgtttggagcccgaagggacagcagaagc
aacatctaccatccccctcccatgacagacattgagaaaatgaagaggaatcacatcaag
gagcagaaagcctttgccttaatcagagagatactggcttacttgggatttctatggatg
ctgttgttggttgcctatggacagagggatcccagttcctactacttgaacaagcacatc
gagaacagctttacagatgggtttcgagatgtctacagctaccaggacttcttcacatgg
gcgagaactaccttagtcaacaatttgtatggttcatatcaagggttcattacggatggc
aactccaagttggtgggtagtgcccggatccgacaagttagagtgaagggggacacctgt
cccattgctcccaagctgcagcattcagtccaagaatgccatgctccttactctctccag
acagaagatacatcagactatggagaacgctggaacatctcagcctttgataactcctct
gacttcagctctgcatggcagtatcagagccagtccaaactgagaggccatcccatctgg
ggcaagcttgccatctacaggggaggtggatatgtggttcacttgggcaccgacctgaag
aatgcaaccagagttctccagtacctcttcagcaacatctggctggatacctttacgaga
gcagtgtttattgaatttacagtctacaatgccaatgtgaacctgttctgcattattagc
ttgatgtttgaaactaatgctttaggggcattcttcacacatgcagaactgcaaagcatc
cggctgtatccatacacagatggcctacacatatttgttgttgcagcagaagttatttat
ttcctatttgttgtctactacatggtaatacagggaaagctcatgagggctctgaaatgg
aggtatttccacagcaagtggaacctgctagagctggccattatattgattagctggagc
actctatcagtgtttgtgaaccggacaatcctgggggcacgagacatcagttactatcaa
aagcacaaggatgagtgtgtaagcttcaatgaaactgccacagctgatgcagtgcttggc
tacctgattgcttttctagtacttctgtctacagtgaaattgtggcatctcctgaggctc
aaccctaaactcaacatgatcacttctaccctgaagagggcatggggtgacatctctgga
ttcatcatagttattgcaatcatgttcctggcttactctatcgctactaatctgatattt
ggttggaagctgcactcttacaaaaccctcttcgattcggcagagacaatggtcagcctt
cagctgggaatcttcaactatgaggaggtcttggactataatccagttctgggttccttc
ttaattggatcctgcattatttttatgacatttgtggtgctgaacctgttcatttcagtt
atattggttgcttttagcgaagaacagaaatattatcaggcatccgaagaggaagagatt
gttgatctaatgctgatgaaacttttcagtttccttgggattaagtgcaaaaaagagcag
acaaccgatagtgaggaactgaaagaacttgccagcacctga
DBGET
integrated database retrieval system
