Gavialis gangeticus (Gharial): 109289289
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Entry
109289289 CDS
T07453
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109289289 (TDRD12)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109289289 (TDRD12)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109289289 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109289289
NCBI-ProteinID:
XP_019360826
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MIEVLILKIEDPGCFWVILKGCGSFVDNEVEYRKLHAEMNQFYNQSCRDVDEVKPLMVEE
GQVCVVFCQELRCWCRAVIKTIMSCTEHCLVECFLVDYAKYIPVKTRDIRVAVEAFMRLP
YRARKFRLYCIKPVTLHINFCEDTAEIVPAKAWDGAAIQYFQKLLRETTQIEAKLCAIED
EHFDVYLYVTAQDEKVCVNDELVAKNFACYMSTEENTNNPANKPSKQSPLSLVGFPEKVI
NPVLALWPVLLQGKAPKNLKTGHTASNPLLEKNCKNLSTTSFNGHMESTVGVFLGFPFKE
HITISGQTDSDLLEIICKKQLKKVEHDEKSGCVKLLQFLNPDPSKTDHFENEKQEFLKVS
AEQHFVFNKKIEPCSSLETAPLLVNLKKELLWNKFQGPTFTQSYCWPPIARGCDVVVISH
HGNDPLLYIPPILTFLQSRGCYKSLPSGNGPTTLIVCPGWKKAQLIFELLKKYGRCSRPL
HPLLLLVGLNNEEVKNMKLQQGCEVIVTTPYSLLRLLEHHSLLLLRLCHLVLDEVEVLLS
EASKQVFMILEYYRKTIPVAGRESAPRQIVVVGTRWNKHIEHVTREFMNDPYIVITSMEE
ASIYGNVQQVVHLSLDCDKISVLLRILDFTPSNAQKTLIFTNSVDETEMVYRAVESSAIF
CLKIHKEIEYHFKYVEEQWRKKFSPGTHVVLVLTDDCMKYLGITDATCVVHFSFPSSPSV
FGIRLHSMSDNFRSGIEKSSLKDDKFTKAKSILLLTERNGCHAGGVLHYLEHTDAKIPPE
LSDFTAGVLKAKEDMKLARPVCHYLKTLGVCKNMRICPDRHQVNLQIDFPPKSSDQITSA
VGYITILPLHIVDATNYFGRIVDKKEDQYAILAVEMDKYFKKASNKVSVEMVKKLSLYGL
HEEKIFHRVQVLEIFPKEENGFFYNVTIKYVDEGRTGQVQGHQLFPLPAEFQSLPPQAVE
FIVCRVKPIDNETEWNPKITRYIHQKIKGKLHEARVVLTLGNTVWVDPMVQVTRLPDLKI
SVNEYNIRSEILSMGMGTDNPEHIKQLQKLCESAKMLAPEKKTLQTSIRDVASPQREPEQ
DVDSVQSPLLGEKLSENCNFSQTILDQSGPIAKIEVENSTQHHHKCFYPEIKWFQKEDTV
TMKIKIRNVTDCKCEFLRNRVIFSAFSEDKFYLVDTELYENILTEKSVCEVKNEEPVIIL
AKEKKESWLKLLKYKNPNVSFDFEHWEDCGDESPFPVGAEKLHHPATLAMEEMEESSDSE
TESGD
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagttttgatattaaagattgaagatccaggttgcttttgggtcattctgaaa
ggatgtggatcttttgtagacaatgaagtggaatatagaaaactgcacgctgaaatgaat
cagttctataaccaatcttgtagagatgtggatgaagtaaagccattaatggtagaagaa
gggcaggtgtgtgtggttttttgtcaggaactgagatgctggtgtagagcagttattaag
acaatcatgtcctgtacggagcattgcctggtagagtgcttccttgtggattatgccaag
tatattccagttaaaacaagagacattcgggttgcagtggaagcatttatgcgactccca
tatagagcaagaaagtttagattatactgtataaagccagtgacgttgcacatcaacttc
tgtgaagatactgcagaaatagtacctgctaaggcttgggatggtgctgctattcagtac
ttccaaaagctgctcagagaaaccacacagattgaagccaagttatgtgctatagaagat
gaacactttgatgtttatctttatgtaacagcacaggatgaaaaggtatgtgttaatgat
gaacttgttgcaaagaactttgcttgttatatgtctactgaagagaacacaaataatcct
gcaaataaaccaagcaagcagtccccattaagtcttgtgggttttccagaaaaagtgatc
aatcctgtacttgctctttggccagtgctcttacagggaaaggcacccaaaaacctaaaa
acagggcacactgcttcaaatcctcttctggaaaagaattgtaaaaatctttcaactaca
tcttttaatggacatatggagtctactgttggtgtgtttctgggctttccttttaaagaa
catataactatttctggtcagacagacagtgacttacttgaaatcatatgtaagaaacaa
ctgaaaaaggtagaacatgatgaaaagagtggctgtgtaaagcttctgcagtttttaaat
cctgatccttcgaaaacagatcattttgagaatgagaaacaggagtttctaaaggtcagt
gcagaacaacattttgtttttaacaagaaaatagaaccttgttcatctcttgaaacagca
ccacttcttgttaatctgaaaaaggagcttctctggaataagtttcaaggccctactttc
acacagtcttattgttggccacctatagctcgtggatgtgatgtagttgtcatctctcat
catggaaatgatcctctgttgtatattccaccaattcttacatttttgcaatcaagaggc
tgctacaagtcattgccaagtgggaatggtccaacaacactaattgtgtgtcctggatgg
aagaaagcacaactcatttttgaattactgaaaaaatacggcagatgttccagaccgttg
catccattgttgttattagttggactgaataacgaagaggtcaaaaatatgaaacttcaa
caaggatgtgaagtgattgtaaccacaccatacagccttttaagactgcttgaacaccat
agcttgttattacttagactttgccatcttgttcttgatgaggttgaggtactgttatca
gaagccagcaaacaagtatttatgatcctagaatattataggaaaacaatccctgttgca
gggagggaatctgcaccacgtcagattgttgttgttggaactcgttggaataaacatata
gaacatgtaacaagagagttcatgaatgatccttatattgtgataacatctatggaagaa
gcatccatatatggaaatgttcaacaggtagtgcacctttctttggactgtgacaaaatc
tctgtattactcaggatattggatttcacccctagtaatgctcagaagaccttgattttc
actaattctgtggatgaaacagaaatggtttatagagcagtggagagcagtgcaatattt
tgcttaaaaatacacaaggaaattgagtatcattttaaatatgttgaagagcaatggaga
aaaaaatttagtcctggcactcatgttgtgttagttttaactgatgactgcatgaaatac
ttgggaattactgatgcaacttgtgtggtacatttcagttttccatcctctccaagcgtt
tttggtatacgcttacacagcatgtctgataactttcgaagtggcatagaaaagagttct
ttgaaagatgacaaatttacaaaggcaaaatccatcttgttgctgactgaaagaaatgga
tgccacgcaggtggtgtgctgcattacttggaacacacagatgctaaaattccaccagaa
ctgagtgactttacagctggagtgctcaaagctaaagaagatatgaaactagcaaggcct
gtttgtcattatcttaaaacacttggggtttgcaaaaatatgaggatatgtccagatcgg
catcaagttaatttgcaaatagatttccctccaaagtcttcagatcaaattacatcagca
gttggatatatcacaatactacctctccacattgtggatgcaacaaactactttggtcgc
atagtagataagaaagaggatcaatatgcaattcttgctgtagaaatggacaagtatttt
aagaaagccagtaataaagtatcagttgaaatggtgaagaaactatcattgtatggatta
cacgaagagaagatttttcatcgggttcaagtattagagatctttccaaaagaagaaaat
ggctttttctataatgttactatcaagtacgtagatgaaggtagaactggtcaggttcaa
ggccatcagttatttcccttacctgcagaatttcagagtttgccccctcaggcagtggaa
ttcattgtttgtagagtaaaacctattgataatgaaactgaatggaacccaaagattact
agatatattcatcagaaaattaaaggaaaattgcatgaagcaagagtggtgcttaccttg
ggaaatacagtttgggttgatccaatggtccaggtcaccagacttccagatttgaagatt
tctgttaacgaatacaacattagatctgagattttgtctatgggaatgggaactgataat
ccagaacacataaaacaactccaaaaattgtgtgaatctgctaaaatgttagctcctgag
aaaaagaccttgcagacttctattagggacgtggccagtccgcagagggagccagaacaa
gatgtggacagtgtgcagagcccattattaggagaaaaattgtctgaaaattgcaatttc
tcccaaactattttggatcaaagtggtcccatagccaaaattgaggtggaaaactctaca
cagcatcatcataaatgtttctatccggaaattaaatggtttcaaaaggaagataccgtt
accatgaagataaaaataagaaatgtaactgactgtaaatgtgagtttttgagaaacagg
gttattttcagtgctttttcagaagacaagttttatttggtggatacagagctgtatgaa
aatatacttactgaaaagtctgtatgtgaggttaagaatgaagaacctgtgattatcctt
gcaaaagaaaagaaagaatcatggctcaagctgctaaagtacaagaatcctaatgtgtct
tttgactttgaacattgggaagattgtggagatgaaagcccctttccagttggtgctgaa
aaattacatcatcctgctacactagcaatggaagaaatggaggaatcctcggacagtgaa
acagaaagtggtgactaa
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integrated database retrieval system
