Gavialis gangeticus (Gharial): 109289579
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Entry
109289579 CDS
T07453
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04115
p53 signaling pathway
ggn04120
Ubiquitin mediated proteolysis
ggn04137
Mitophagy - animal
ggn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109289579 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109289579 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109289579 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
109289579 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109289579 (SIAH1)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109289579 (SIAH1)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109289579 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
109289579
NCBI-ProteinID:
XP_019361212
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MNTVLRRVCTVEMSDNGSILTKVVGEIQGEEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgttttaagaagagtatgcaccgtggagatgtcagataatggcagtatcctc
actaaggtagtaggagaaatacaaggtgaagaaatgagccgtcagactgctacagcactc
ccgacaggtacttcaaagtgtacgccatcacagagggtgcctgcattaactggcactaca
gcttccaacaatgacttggctagtctttttgagtgtcctgtgtgttttgactatgtgctg
ccacctattcttcagtgtcagagtggccatcttgtttgtagcaactgtcgacccaagctc
acatgctgtccgacttgccgaggcccgttgggctccattcgcaacttggctatggaaaaa
gttgccaactctgtactcttcccatgtaaatatgcctcttcaggatgtgagataaccttg
ccacacacagaaaaagcagaccatgaggagctgtgtgagtttaggccttattcatgtcca
tgtcctggtgcttcgtgtaaatggcaaggttctctggatgctgtaatgccacatctaatg
catcaacataagtcaataacaacattacagggagaagatatagttttccttgctacagac
attaatctgcctggtgctgtcgactgggttatgatgcagtcttgttttggctttcatttc
atgttagtgctggagaaacaggaaaaatatgatggtcaccagcagttctttgcaattgta
cagctgataggaacacgcaagcaagcagaaaattttgcttatcgacttgagcttaatggt
cataggcggcgattgacttgggaagcaactcctcgctctattcatgagggaattgcaaca
gccattatgaacagtgactgtctagtctttgacaccagcattgcacagctttttgcagaa
aatggcaatttaggcatcaatgtaactatatcaatgtgttga
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