Gavialis gangeticus (Gharial): 109289607
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Entry
109289607 CDS
T07453
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109289607 (CHD9)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109289607 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
109289607
NCBI-ProteinID:
XP_019361253
LinkDB
All DBs
Position
Unknown
AA seq
2891 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDTLNHVQDTQ
AQQKMSEFEQLNQYDSLKLHQVNQSFNSPADSVLSPHSQFSCSPIHPPNQSNGMFPDVAD
GSPMWGHQTATAIPNQNGSPFHPGHSQTMQQNKSFVAHHDFALFQANEQQHQCASLRSQQ
SRNNANAGQDTLSQPKNFMEVNVSASHRVSVTHPPPVTNPSASQQPLSVKPFSQTATASI
HFCGNQEGNFDGQSPTMTSCPVNNTQQFSYSYSNNHISSTSLLQSSTTLSSSQQTHPLSD
FTGSDAFASRAGTKQETTEHLLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNISFPAS
TGSSQINHFSDPIESNGFSSLDENLLHQVESQGEPFTGLDPEDLLQEDLLPQFDDSAFVQ
DSASHVLEHDLEHHITPQQVTQSSDIARTQSQQSQMHPWHSSVSNQHVQGRNRVTLQGQP
PSSKKTDGSGAYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKIKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGK
KQKRKNESSDELSDTKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEVSAGVTVEAEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSF
CEDKDTGEPVVYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LTGIRGPFLIIAPLSTITNWEREFRTWTDINVVVYHGSMVSRQMIQQYEMYFRDSQGRII
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFRETYSPTAPDFHLQAMIHSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEPESEGDEKPKLRRPCDRSSGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNDFQKVFDGADASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAM
FKDDMEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTNKNRQTQQ
IQPAFPVQASVMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPGIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLASQARLPDAKGNALE
DTKAKNENLKEEPHSSEEESVSTEETRTGMKSESLSPKNGTPSQITNHKPSVKAETDRRM
VAARTEPLTPNPSSKKQRLNKRGSETSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEAAQKRAEGTPHMKAYDEESVAS
LSTTQDETQDSFQLNNGTQNSTYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPS
ARRSYDNNTVASFYTTKLLDSPGAAADYSEPSAPTPPSAGVKEERDQSPQMSKVKKHVRE
KEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGTLGQQQYLARLRELQNASETSLVNFPK
SLPDSGTSNQLTASANGVIADSQPVVKKRRGRRKNVEGVDILFINRNKQPNHVSPGINTS
QIAPGINPTLTFAQSRSLLDEESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVED
LGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKD
LCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKAT
AAAAATTATNISVNPFLANGLLPGVDLSTLQALQQNLQNLQSLQVTAGLMGMPAGLTTGG
EAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEDKKGSDSKEADGKKERTESQNK
DNCGENSVSSSPSTSSAAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDV
QNSENNDTGSAKPTEEKEENSRIRDQEDKGGTEPNSHNENSTDEGSEKADASSGSDSTSS
SSEDSDSSDED
NT seq
8676 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgtacaacctgggcctgtttcactggttgatgaactgaat
ttgggtgcagaatttgagcctttgcacatagacacattgaatcatgtgcaagatactcaa
gctcaacagaagatgagtgaatttgagcagctaaatcagtacgattcactgaaacttcac
caagtaaatcagtcattcaacagcccagctgacagtgtcttatcaccacactctcaattc
agttgctcaccaatccatccaccaaaccaatccaatgggatgtttcctgatgttgcagat
ggtagtcctatgtggggtcatcaaactgccacagctattccaaatcaaaatgggtcccct
tttcacccaggacattctcagactatgcagcaaaataaaagctttgtagcacaccatgat
tttgccttatttcaggccaatgaacagcagcatcagtgtgcctcactacgttcacaacaa
agcagaaacaatgctaacgcagggcaagacactctgagtcagccaaaaaacttcatggag
gttaatgtgtctgcttcacacagagtcagtgttacccacccacctccagttactaatcca
tcagcttcacaacagcctctttctgttaaaccattttctcagactgcaactgcttcaata
catttctgtggaaatcaagagggaaattttgatggacagtccccaaccatgacttcttgt
ccagtcaataatacccagcagttttcttattcctactctaacaaccacatttcttctacc
agccttctgcagtcttctacaactctttctagtagccaacaaacacatcctttgtctgat
tttactggaagtgatgcctttgcatctcgagcagggaccaaacaagaaaccaccgagcac
ttgttgaatcctaacacacccttaaattcaaatagtttccaaatgttgcattcagcgcat
cctcagggcaacttcagtagttcaaaactctctcctgtgaacattagttttccagcttct
actggttcttctcaaataaaccatttcagtgatcctatagaaagcaatggtttttcatct
ttggatgagaatttacttcatcaagttgaatctcaaggtgaaccatttacagggcttgat
ccagaggacctcctccaggaagatctccttccccagtttgatgattcagcatttgttcag
gacagtgcaagccacgtattagaacatgacctagaacaccacattactccacagcaagta
acgcagtcatctgatattgctcggacacagtcacaacaaagtcaaatgcatccttggcat
tcttcagtttctaatcagcatgttcaaggcagaaatcgtgtaaccttgcaaggacagcct
ccttcctcgaagaagaccgatggttcgggagcttatactaaattgcagaatacccaggtg
agggcaatgtctgaaaagaaacagaagaaaaaagtggagtctgaaagtaagcaagagaag
gctaatcgcataatatcagaggcaattgcaaaagcaaaagagagaggggagagaaatatt
ccacgagtgatgagtcctgagaatttccccagtgtttcagctgaaggaaaagaggaaaag
aaaggtagaaaaattaaatccaaaccaaaggacaaagagagcaaaaaacctaaaactggc
tcctcatccaaaattaaagagaaaacaaaaataggcaaacttattatcacattgggtaaa
aaacaaaagagaaaaaatgagtcttcagatgaactgtctgacaccaaacagactccacag
aggtcattcaaagatgaggactcacagaaaagaagatcgaatcgtcaagttaaaaggaaa
aagtatgctgaagaaggagaaggaaaacagtcagaggaagaagctaaagtttctgtgaaa
atcaaaaagaattctgctcctttgcctgctgaacaacccctacaattatttgtggagaat
ccaagtgaagaggatgcagcaattgtagacaaaattttatcttcaaggatagtaaagaaa
gaagtatcagctggagtgactgtggaagcagaagaattctttgtgaaatacaagaattac
tcttacctccactgtgaatgggccacagaacaacagcttttgaaggataaaagaatccag
caaaaaatcaaacggttcaagctgagacaggcacaaagagctcacttttttgcggatatg
gaggaagaaccttttaatcctgattatgttgaagtagaccgggtattagaagtctccttt
tgtgaagataaggatactggggagcctgttgtttactacttagtaaagtggtgttcatta
ccatatgaagatagcacatgggagctgaaagaagatgtagatcaagcaaaaatagaagag
tttgaacaattgcaagcttccaggcctgactcaaggcgactggaccgacctcctccgaac
tcttggaagaagatagaacattctagggaatataaaaatggcaatcagctcagggaatac
caactggaaggactcaattggctcctgttcaactggtacaataggagaaactgcatttta
gcagatgaaatgggccttggcaaaaccattcagtcaattacattcctctatgaaatcctc
ctgactggtatacgtggacctttcttaatcatagctccactttccactataactaattgg
gaaagagaatttcgtacatggactgatattaatgttgtggtgtatcatgggagcatggtt
agccggcagatgatacagcagtacgaaatgtacttcagagactcgcaggggcgtatcatt
cgaggtacatacagattccaagccattatcaccacttttgaaatgattcttggtggctgt
ccagaactcaatgcaattgaatggcgttgtgttattattgatgaagcacacaggctaaag
aataaaaattgcaaactcttggaaggactaaaactcatgaatcttgagcacaaagtgctg
ctgacaggcacaccgctgcagaacacagttgaagaattatttagcctccttcattttctt
gaacctttgcgttttcctgctgaatctacattcatgcaggaatttggggatcttaaaaca
gaggagcaggtgcagaaactacaagctattctgaaaccaatgatgctgagacgtttaaaa
gaagatgtagagaaaaagttggcacccaaggaagaaactataattgaagtagaactaact
aatatccagaagaaatattatcgtgcaattttggagaagaattttgcttttttgtctaaa
ggagcaggccaagctaacgtacctaatctagttaacactatgatggaactcagaaagtgc
tgcaatcatccttatctcatcaaaggtgctgaagagaaaatccttggggagtttagagag
acgtatagtccaactgcacctgacttccacctacaagcaatgatccactctgctggtaaa
ttggttctcattgataaacttcttccaaaaatgaaagcaggaggccataaggtgcttatc
ttctctcagatggttcgctgccttgacattctggaggactatcttatacataagagatac
ttatatgaacgaatagatggaagagtaagagggaatctgaggcaagctgctatcgatcga
tttagcaaaccagactctgatcggttcgtgttccttctgtgtaccagagctggtggactg
ggcattaatttgactgcagctgatacatgtattatttttgattctgactggaatcctcag
aatgatctgcaggcccaagcacgttgccacaggattggtcagaacaaagcagtgaaagtc
tacagattgataactcgaaactcatatgagagggaaatgtttgacagagcaagtctgaag
ttgggtttggataaagctgtcctacagagcatgagtggaagagaaaatagcgttggtggt
attcagcaactttccaaaaaagaaatagaagatctgctacgaagaggtgcctatggtgct
attatggatgaagaagatgagggctctaaattctgtgaagaagatattgaccaaattttg
caacgtcgtacaaaaactataacaattgaatcggaaggaaggggttcaacatttgctaaa
gctagttttgttgcatctggaaacaggactgatatatccttagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatagaagccatcagtggtagaaacagtctg
gtcattgatactccaagaattaggaagcaaacaaggccatttagcgctacaaaagatgag
ctggctgaattatcagaaccagagagtgaaggagatgaaaaaccaaaactccgcagacct
tgtgatcgttccagtggatatggaagaacagagtgctttcgagtggaaaagaacttactg
gtctatgggtggggtcgatggagagagattttgtcacatggtcgcttcaagagacagcta
aatgaacaagatgtggaaataatttgtcgagccctcttagcatattgccttgttcactac
agaggagatgaaaaaataaaaagttttatatgggatctcatcactccaacagaggatggg
caaacacgtgagctacagaatcacttaggtttgtcagcccctgtacccagaggtcgaaaa
ggaaagaaagtaaagactcaggccagcacctttgatatacataaagcagaatggcttcga
aaatataatccagagcatctacttcaagatgaaggatataaaaagcacataaagcaccac
tgcaacaaagtcttgctacgagtaaggatgctgtattatttaaaacaagaagtcattgga
aatgatttccaaaaagtttttgatggagctgatgccagtgaaattgatgtttgggtccct
gaaccagaccactctgaagtcccagcagaatggtgggatgcagatgcagataaatccctc
ttaattggagtttttaagcatggttatgagaaatacaacactatcagagcagacccagcc
ctgtgcttcttggaaagagtgggcaaaccagatgaaaaagcagttgctgctgaacagcga
gcaaatgattacattgatggggatgtagaagatccagaatataaaccagccccagcaatg
tttaaagatgatatggaggatgatgtttcatcaccaggggatcttgtgatagcagatgga
gatggtcagatgatggaaggagacaaaatttattggcccactcagtctgccctaacaaca
cgtctgcgccgcctaataacagcctatcaacgtactaataaaaataggcagacacagcag
atccagccagcattcccagttcaggccagtgtgatgcagcctccatatgaagaagctgct
ctaaatccaaaaatggctgctaagattgaaagacaacaaagatggacaagaagggaagaa
gctgatttttacagagttgtgtctacatttggagtggtgtttgatcctgacagaggccga
ttcgattggacaaaatttagagctatggctaggctacataagaaaactgatgagagtttg
gagaagtacttatatgcatttatgtctatgtgcagaagagtctgtcgtctcccctcaaaa
gaagaactggtagatccaggcatttttatccagcccattacagaggaacgtgcttcacga
accttatatcgcattgaacttctgaggaaagtacgagaacaggcgctccgacatccacag
ttgtttgaacgattaaaactttgccagccaaatccagatttaccagtctggtgggagtgt
gggactcatgaccgggatttacttattggagctgctaagcatggggttagcaggacagac
tatcacattcttcgtgatcctgaactctcatttatgtctgcccagaggaactacagtcag
aacaaagtggcattatcaaggacttctactccacttttgcatcagtatcagatggcattg
tcagcttctcctcttgcatctcaggcaagattaccagatgctaaagggaatgctcttgag
gatacaaaagctaaaaatgaaaacctgaaagaagaacctcactcttctgaagaggaatct
gtgtctacagaggagacacggacagggatgaaatctgaatctttgagcccaaagaacggc
acaccatcacagattacaaaccataaacctagtgtgaaggctgaaactgataggcgcatg
gttgcagcaaggacagagcccctaactccaaacccttcttccaaaaaacagagactgaac
aaaagaggatcagaaactagttccgattcagactctgattcagaccgatcatcctgttct
tccaggtcatcttcatcctcctcttcctcgtcttcatcttgttcgcgctctcgatcagga
tccagctcttcatcgtcgtcatcttgttcctcagcatcatcgtcgtcgtcgtcatcctct
tcttcctcttcatcatcttcatcatcttcctctgaagagagtgacagtgatgaagcagca
caaaagagagcagaaggaacccctcacatgaaagcatatgatgaagagagtgtagcgtct
ctgagcactacacaagatgagacccaggacagtttccagttgaacaatgggacacaaaat
tccacttatctcttgcaaggtggatacatgttggctgcctcctattggccaaaggatcga
gttatgattaaccggctagacagtatttgtcaaacagtattgaaaggtaaatggccttca
gcaagaagaagttatgacaacaatacggtggcatctttctatacaaccaaacttctggac
agcccgggtgcagctgcggactacagtgaacccagtgcaccaacacccccaagtgcaggt
gttaaagaagaacgtgatcagtcaccacagatgtcaaaggtgaagaagcatgtacgagaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaagcag
gggctttctcagaaaaggccatttgagagcgaagaaggcacgttaggacagcagcaatac
ctggctcggcttcgtgaactccagaatgcgtcagagaccagccttgtcaatttccccaaa
tccttgccagattcaggtacttccaatcagttaacagctagtgctaatggagtaatagct
gacagccagcctgtagtgaaaaagaggagaggaaggaggaagaatgtggagggcgttgat
atcctctttataaacagaaataaacaacctaatcatgttagtccaggaattaacacctct
caaattgctccaggaataaacccaacacttacatttgcccagtcccgaagtttacttgat
gaagaaagtccggttcctgttattaacctgaaggatgggacaaggcttgcaggtgatgat
gcaccaaaaaggaaggatttagaaaaatggctcaaggaacatcctggctatgttgaagat
ttaggagcttttattcctcgaatgcagcttcatgatgggaggcccaaacaaaagagacat
cgttgtcgaaaccctaataaattggatgttaacagtctcactggtgaagaacgtgttcag
ctgatcaatagaagaaatgctagaaaggtgggaggtgcctttgccccaccactgaaggat
ttatgcagattcttaaaagaaaatccagaatatggagtagctcctgagtggggagaggtt
gtaaaacaatctgggtttcttccggaaggtatgttcgatcgtattctcactgggcctgta
gtgcgagaagaagtaagcaggaggggaaggcggcctaaaagcgagattgccaaggcaaca
gcagcagcagcagctacaacagcaacaaatatatctgtcaaccctttcctagccaatgga
ttacttccaggagtggatctatctactcttcaggccttgcaacaaaacctgcaaaactta
caatcactgcaagtaactgcaggattaatgggaatgcctgctggcctaactactggagga
gaagctaagaacatggctgctatgttccccatgctactgtcagggatggctggattacca
aacttgctgggtatgggaggacttctaactaaatctacagaatctgtgtcagaggataaa
aagggaagtgactcaaaggaggcagatggcaagaaagaaaggacagaaagccaaaacaaa
gataattgtggagaaaactctgtatcaagctctccttcaacatcctctgctgctgcagct
gccaacccattagctcttaaccccttacttttgtccaatatactttacccagggatgctt
ctcactccaggccttaatctccatatcccagctttgtcccaatctaatatttttgatgta
cagaacagtgaaaacaatgacacaggctcagccaagcctacagaggaaaaggaggaaaat
tctaggattagagatcaggaagacaaagggggaacagagccaaactctcataatgaaaac
agcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcgtct
tcatctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
