Gavialis gangeticus (Gharial): 109289700
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Entry
109289700 CDS
T07453
Symbol
NLRC5
Name
(RefSeq) protein NLRC5
KO
K22615
NLR family CARD domain containing 5
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ggn04054
]
109289700 (NLRC5)
Pattern recognition receptors [BR:
ggn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109289700 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
Atypical_Card
NLRC4_HD2
LRR_4
LRR_8
NPHP3_N
NOD2_WH
AAA
AAA_22
AAA_16
nSTAND3
AAA_7
bpMoxR
NB-ARC
AAA_25
AAA_19
ATPase_2
Mg_chelatase
Helicase_IV_N
RNA_helicase
AAA_30
AAA_5
Motif
Other DBs
NCBI-GeneID:
109289700
NCBI-ProteinID:
XP_019361433
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MDDLDLHHVMAKVRPQLVEFLSHNSEWLIMKAKHFLPLVDLKYVDDITDCKQKVSELLDR
LENVELTIQKQFVQCICMECNLPMDLEIQLMSTAGEGNLNQQQETQSPSSQFAGPGRRRP
GGNSAAIDKESKQQRLDSAERYRHLLISSMHQRYRSQRAPGAAVLGQVQPPAFHQLFVNL
VIRQSKASRLKERLDKSKEDLAGSQEAEEVADTAVKVSDLFDTIISSGTTKVILLFGKPG
TGKTMLMHRICQKWAEGSFHQFLLTFLFEFRQLNLISQKLTLKELLFDFSLQPEDCPDTV
FQHLLENAKQMLIIFDGLDEFVGNTGVSSSPDMHPAFPRPMSISELFADLCDGKLLPGCT
VLVTSRPKKCPDFLLNTVDLLAEIWGFDHEKVEEYVNRYFREHTFKEQAIAQLKNNSKLL
SMCFIPALCYIVCICLEYLLIKQLLSVELPQTMTQFYIQMLLIFISKQQKECSQREEVQL
NHYRVAILGLCDLALKGLEEKKLVFYVDDIPEHVKDFASLHGLLTVFEVKRSDHLPEAGY
AFVHLSLQEFFAALCVMISKRADRNYLRKKFSLKSKWTLKNEARTEFMESFHIFLSGLSS
KECRKFLAQLSEQNEAWVQAKQAVILQSLKKLAATNLTGPKIIELCHCTYETQDLEVAQH
VGSQLNFKYEFKNFRLTPLDISALVFVINCGQELTHLDFAGCPMELDCLEVLASCTNIEC
LSFRSRKCGDEFAAVLSRTLPKIRSLKKLELTGGNITALGLANLEQAFPHCTQLEEINLQ
GNRMRDQDMTKALEVFSRMEKLKKIDLSHNDISTEAVLVLAKRAIVCPNVTELHVRGDTI
IILFSGHPEKVPRSASLRGKTRKENAAQMRHVMLRLQDCSLDSHHTEEITAVLRGCSQLS
EVDLSGNRLGDEGCRQLVGSLPEVQISKCLDLSNNCISVDGICCVLNSMNTCLNLVEIEA
SLHHQTAILKFEGAEAFASTHSRDTSSYGDQLDGNESQKPMVPRRIRVTDSHFSRNDLEK
LCAVLKHCSRVTALDLTNNSLGDQGVEKLVWFLPQLKTLSSLELSGNRVSLSTVFCLAQA
LSLLERIKTVDISLGKAQLILLTFQEGVRVRNTRRSAGRSLALPQPSGSDRCFRLRECMV
GPEDMDKLCQILAGCTELSEIDLSKNALNDQSIQRLLMFLPRLHRLNLLSIRNNKLSPHC
TLLLANSINLCERIREVEVRCSENAFLCLAKNMEIQEISCRLTNCSIGPNEIQDLCKILE
QCDHLAELDLSGNQLGNEGLRCLLANLPQMRVSHLMNLSHNNISQHGVMHLINALTTGRN
VSEVQVSLCAEETSLIKFTSEDEPKKILRLTKCNFQEEHFLQLCSLLEKCNYLTEYISAK
NNMTMTAVENLLRALRKSLGMLRISIDEPWVCDKELLTLLELAVQVQGNIIEITILKNKG
LFKVGEEFPYRMEKMEDVVSRLNQCELEAKHLYFLQRVIEKCTQLQELRWSHIDLNNTEA
ATLAHALLSLPELKKFELTSSTIMPIGIRQLVAGLQQCHGLEELNLGFLKLDDTAIQMLV
PSICKMLSLKRLILNNNNIGNEGCIHLAEALKDSHRLEEINLSLNKFEDAGLVKIATALL
EMQNLKKINFSGNSIGPVGGEKLIEALSHCKQVEELLLARTVVGDKAAAQLSLCLPGMCH
LKILHLQSNGISSLGGTQMARALVKCQQLEEISLSENNIGEEGTHALSEGLLHFPQLRRI
ELKLCEIGDSVSKPLAFGFSQCPFIEEIILSWNHLGDDSAFELAEILPEMTKLRILDLDK
NRISACGASRLAEELTKCYGIQVIRLWNNAIAKDAEENLMRQDSRLHFSFF
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttggaccttcatcatgtcatggcaaaagttcggccacaactagtggagttc
ctcagtcataactctgagtggctgatcatgaaagccaagcatttcctcccccttgtggat
ctgaaatatgtggatgacatcactgactgcaaacagaaggtctcagagctcctggacagg
cttgaaaatgtagaactaaccattcagaagcaatttgttcagtgcatctgcatggaatgc
aacctccccatggacctagagatacaactcatgagcactgcaggagaaggaaatttaaac
cagcaacaagaaactcagtctccatcttctcagtttgcaggacctggacgaaggcgtccg
ggaggcaattctgctgccattgataaagaatctaaacagcagcggttggattcagctgaa
cggtaccggcacctcctcatcagttcaatgcatcaaagatataggagtcagagagcacca
ggagcagcggtgctggggcaagtgcaacctcctgctttccaccaactctttgtcaaccta
gtgatcaggcagagtaaagcttcccggctaaaggagagactggacaaatccaaggaggac
ctggcaggctcacaggaagcagaagaggttgcagatacagcagtgaaagtatctgacctg
tttgacaccatcattagctcgggtaccaccaaagtgatccttctgtttggcaagccaggg
actggcaagactatgctgatgcacaggatttgccagaagtgggcagaagggtcttttcat
caatttctgctgacttttctttttgagtttaggcaactgaatctaataagccaaaagctg
actctgaaggagcttttgtttgacttttcccttcagccagaagactgccccgatacagtg
tttcagcacctcctggaaaatgccaagcaaatgttgatcatctttgatgggctggatgag
tttgtgggtaacactggtgtttcatcttctccagatatgcaccctgccttccccaggcct
atgtcaatatctgagctcttcgctgatctctgtgatggaaaacttctgcctgggtgcaca
gtattagtcaccagccgccctaagaaatgtcctgacttcctgttaaacacagttgacctg
ctggcagaaatttggggctttgaccatgagaaggttgaggaatatgttaaccgctacttt
cgtgagcatacgttcaaagaacaagccattgctcagctgaaaaacaatagcaagctcctc
agcatgtgttttatccctgccctgtgctacattgtctgcatctgtttggaatatttgctg
attaaacagctgttgagtgtggagcttcctcaaaccatgacccagttttatattcaaatg
ctcctcatttttatcagcaaacagcaaaaagagtgcagtcagagggaggaagttcagctg
aatcactacagggtggctattttgggcctgtgtgaccttgcgctgaagggcctggaagag
aagaaattagtgttttatgttgatgatatcccagagcacgtgaaagactttgcttccctg
catgggttgttgacagtttttgaggtgaagaggagtgaccacctcccagaggctggctat
gcctttgtgcatttaagtttgcaggaattttttgctgctctgtgtgtgatgataagtaag
agagcagacagaaactacctaaggaaaaagttctctctgaagtcaaagtggactttaaag
aatgaagcaaggactgaattcatggagagttttcacatctttctctctggcctctcgtca
aaagagtgcaggaagttcctcgcacagttatctgaacaaaatgaggcttgggtgcaagcc
aagcaagctgtcatcttgcagtctctcaaaaagctggcagctactaacctcacagggccc
aagataattgagctgtgccactgcacttacgaaactcaagaccttgaggtagctcagcat
gttggaagccagctgaacttcaagtatgaattcaaaaactttaggttgacaccgcttgac
atttcagctttggtgtttgtcattaattgtggccaagagttgacacacttggattttgca
ggatgtcccatggaactcgattgtttggaggttctagccagctgtacaaatattgagtgc
ctaagctttaggagtaggaaatgcggtgatgaatttgcagctgttctttccagaacctta
ccaaagatcaggagtctgaaaaaattagagttaactggtggcaatatcactgccctgggg
ctagctaacctagaacaagcttttccacactgcactcaacttgaagaaataaatttgcag
ggcaatcgaatgagggaccaagatatgacaaaggcgcttgaagtattttccagaatggaa
aaattgaagaagatagatttaagccacaatgatatttcgacagaggctgttcttgttttg
gcaaagagagccatcgtgtgtccaaatgttactgaactgcatgtcaggggggacactata
atcatattattttctggccatcctgaaaaagtcccaagatcagcaagtttgagagggaaa
accagaaaggagaatgctgctcaaatgagacacgtgatgttacgattacaagattgcagc
cttgattcacaccatacagaggagatcactgctgttctcaggggctgctcccagctgtct
gaagtggatttgtcaggtaaccgccttggagatgaaggctgcagacagctggtgggaagc
ctgcctgaagtgcagatttctaagtgtttggacctcagtaataactgcatctctgttgat
ggcatttgctgtgtgttgaattcaatgaacacctgcttgaatttggtggagattgaagcc
agccttcaccatcagactgcaatcctgaagtttgaaggagctgaagcatttgcctctacc
cattctagggatacctcctcttacggtgatcagttggatgggaatgaaagccagaagcct
atggtccctagaagaataagagtgacagacagtcacttttccaggaacgatctggagaag
ttgtgcgctgtattgaagcactgtagcagagtaacagccctagatctgacaaataattct
ctaggagaccagggagttgagaagctggtttggttccttccacagctgaaaacactaagt
tcactagagctaagcggtaatcgggtctccctgagtactgtgttttgcttagctcaagcc
ttgtctttactggaacgcattaaaacagtagacatcagtttgggaaaagctcaactcatc
cttcttacatttcaggaaggtgtcagggtcagaaacaccagaagatctgcaggaaggtct
ctggctctaccacaaccttcagggagtgaccgttgctttcgtctcagggaatgtatggtg
ggtccagaggacatggacaagctgtgtcagatcctggcaggatgtactgagctgtcagaa
attgatttgtctaaaaatgcactgaatgatcaaagcatccaaaggttgctaatgtttcta
ccacgtctgcatagactgaatctattgagtattagaaataacaagttatcaccacattgc
actctcttactggccaactccattaatctatgtgagcgaatcagagaggtagaagtcagg
tgcagtgaaaatgcctttttgtgtctagcaaagaatatggaaatccaagaaatatcctgt
aggctgaccaattgcagcattggaccaaatgagatacaggatctctgcaaaatccttgaa
caatgtgaccatcttgcagaactggacctctctgggaatcagctcggcaatgaggggctg
agatgcctcctggctaacttgccccagatgcgtgtttcccacttaatgaacctcagccat
aacaacatttcccaacatggagttatgcatctgattaatgctctcaccaccggcagaaat
gtatctgaagttcaagtcagtttgtgtgctgaggagacatcactcatcaagttcacaagt
gaagatgaaccaaagaagattctaagactaacaaagtgtaactttcaggaagaacacttc
ttacagctgtgttcgctcttggaaaagtgcaactatctgacagaatacatatcagcaaaa
aacaatatgacaatgactgctgtggaaaatctcttgcgagctctgaggaaaagtttgggt
atgctgagaataagcatagatgaaccgtgggtatgtgacaaagagctcctcacccttctg
gagctggctgtccaagtgcaggggaacattatagagatcacgatactgaaaaacaaagga
ctcttcaaagtgggtgaagaatttccttatcgaatggagaaaatggaggatgttgttagc
aggctgaatcagtgtgagctggaagccaagcacctttactttctccaaagggttattgag
aaatgtacccagcttcaggaactgagatggtctcacattgatctcaacaatactgaagca
gcaactctagcccatgctcttctatctcttccagagctgaagaagtttgagctgacatca
agcaccattatgcccattggaataaggcagctggttgcagggctgcaacagtgtcatggc
cttgaagaactgaatctgggcttcctgaaacttgatgacacagccattcagatgctggtg
cctagcatttgcaaaatgctttcactgaaaagacttatcttgaacaataacaatattggt
aatgaaggttgcatccatctcgcagaagccctgaaggatagtcatcgcctggaagaaatc
aatttaagccttaacaaatttgaagatgctggcctggtaaaaatagccacagccctgctg
gaaatgcaaaatctaaagaaaatcaacttctctgggaatagcattggtcctgttggagga
gaaaagctgatagaggctctgtcccactgcaagcaggttgaagaattactattagctaga
actgttgttggtgacaaggctgcagcacaactgtccctctgtctgcctggcatgtgccac
ttgaagattctccacctgcagtccaatggcatcagctcacttggagggactcagatggcc
agagccctggttaaatgtcagcagttagaggagataagtctgtcagaaaacaacattggt
gaagaaggcacccacgccctctcagaggggcttctgcacttcccacagctcaggaggatt
gaattgaagctctgtgaaattggtgatagtgtttccaagccccttgctttcggcttcagt
cagtgtcccttcattgaagagattatattgtcttggaaccacctgggtgatgacagtgcc
tttgagttggctgagattctcccagaaatgacaaagctgaggatactggatttggacaag
aaccgcatctcagcctgtggtgccagtaggctggcagaggagctcaccaagtgctatgga
attcaagtcatacggttgtggaacaatgcaatagccaaggatgctgaagagaatttaatg
aggcaagactcaagattgcacttctcattcttttaa
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integrated database retrieval system
