Gavialis gangeticus (Gharial): 109289705
Help
Entry
109289705 CDS
T07453
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109289705 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109289705 (CNGB1)
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109289705 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
109289705
NCBI-ProteinID:
XP_019361445
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MLSWLEKVVPQPPETAHVPGEKDEKKEEPKVVIVEPQSAKVEQPPKRDTRAAEPPKNKGT
EGIEKKVEPAMTHDPGPPPASAAESTGGTVLSWLSQGLEKFVPQPAERVQSLGRSFETSL
DILQQAEVPPVQELDVVIQEPPAPKPEEKEPQDSKELQSSSEQTFGSGVINWLVQGFEKM
VPQPEKKPEVCAQQPVLCQPANSCQEAKEKKPEETAKIEEPKLEPKPEPKLEPPPKESAS
ESLTTQEATAASQLGLGVSFFPWALGGDGSRMFDWFVQELEKMVPQPVIKQADSEGEVVT
ACPVEEICIFPEEQGETKLAIEDIESNEVLEEVKPCDTEMELKLSSAPLPSIEEETQEEE
ERVVCGDWYVCPAPEVPAAQRLQTSYFQNGSEEEETKTAKFLPHSCIIFNEDVGEHSFAV
AAPDSYHIEEEQVIEFSAAASDVCQLEHDQPIEFSVAPDVCQPEDDQPIEFNDAPDVYQI
EEEQVTEVKDPLIKVEEVQVEPELEPAGTDTEGPSSITYPIVSIKDADAQGEAPAEEKSH
PPLQLPSDNVSQMLTVPGRPGSSRKKHESRDDTLEELTFTSPLPSPSRDWQGSMPDHMGS
PTSQSSAIINDRLQELVKLFKDRTEKVKEKLIDPDVSSEDESPVASPAKKKPPEPLPPPP
AELKPEAAKVEEEEHYCEMLCCKFKRRPWFDILKNYQFPSSIDPLTNLMYVLWLFFVVMA
WNWNCWLIPVRCTFPYQTPDNIHYWLLMDYLCDLIYLLDILVFQARLQFVRGGDIICDKK
EMRENYMKTERFKMDLISLIPLDIFYFKVGVNSLLRLPRCLKYMAFFEFNNRLEAILSKA
YIYRVIRTTAYLLYCLHVNSCLYYWASAFEGLGSTHWVYDGEGNSYIRCYYWAVKTLITI
GGLPDPRTLFEIVFQLVNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNF
YRIPRVVQNRVKTWYEYTWQSQGMLDETELLVQLPEKMRLDIAIDVNYAIVSKVALFQGC
DRQMIFDMLKRLKSVVYLPHDYVCKKGEIGREMYIIQAGQVQVLGGPDGKTVLVTLKPGS
VFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLSEILVHYPDSEKLLRKKAKKMLKN
NNKQKDEKGMPKETLIIPPRPGTPKLFQAALVAAGKMARKGKLAHIRWKLKELKAMQEMQ
EAASAPVPPKSPMHHRSPLASHRKSEEQQTEEVVTVTGDDSVSFRMTPAPQSGEQILTVE
VVEPEEKK
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcttagctggcttgagaaggttgtgcctcagcctcctgagactgcccatgtcccagga
gaaaaggatgaaaaaaaagaggaacccaaggtagtgattgtggaaccccagtctgcaaag
gtggagcagccaccaaaaagagacaccagagcagcagaacctcccaaaaacaaaggcaca
gaaggcatagagaagaaagtagaacctgccatgacccatgacccaggaccaccaccagca
tctgcagcggaaagcactggaggaactgtcctctcctggctgtctcaggggctggaaaag
ttcgttcctcaaccagcagaaagagtgcagagccttgggaggagctttgagaccagtttg
gatatccttcagcaggctgaagtcccacctgtccaggagctggatgttgtcatacaagag
cctcctgcacccaaaccagaggaaaaggagcctcaagattctaaagagttgcaatccagc
tcagagcaaacgtttggaagcggagtcattaactggctagtgcagggttttgagaaaatg
gtacctcagccagagaaaaagcctgaggtctgtgctcagcagcctgttttatgtcaacct
gcaaacagctgtcaggaagcaaaggaaaagaagcctgaggagactgccaaaatagaagaa
ccaaagctggagcctaaaccggaaccgaagctggagcccccaccaaaagagagtgccagt
gaatctctaactacacaagaggcaactgcagctagccagctggggcttggagtctctttt
ttcccttgggctctaggcggtgatggtagtaggatgtttgactggtttgttcaggaactg
gagaagatggttccacagcctgtgatcaagcaagctgattcggaaggagaagtggtaact
gcgtgcccagtggaggagatttgtatcttccctgaggagcagggagagaccaaacttgcc
attgaagacattgaatccaatgaagttctagaagaggtgaaaccttgtgacactgagatg
gaacttaaactgtcttctgctcctctcccttcaatagaagaggaaactcaggaggaagaa
gagagggttgtctgtggtgactggtatgtgtgtccagccccagaggtacctgcagctcag
cggttgcagacatcctatttccagaatggtagcgaggaggaagaaaccaagactgcaaaa
ttcctgcctcactcttgtattatttttaatgaggacgtgggtgagcattcttttgcagta
gctgctccagatagttaccatatagaagaagaacaagtgattgagttcagcgctgctgct
tcagatgtttgccagctagaacatgaccagccaattgagttcagtgttgctccagatgtt
tgccagccagaagatgaccagccaattgagttcaatgatgctccagatgtttaccagata
gaagaagagcaagtgactgaggtcaaagacccgttgataaaggtggaagaagtgcaagta
gaacctgaattggagcctgctggaacagatactgaagggccatcatcaattacctacccc
attgtcagcatcaaggatgcggatgcccaaggtgaggctccagcagaagagaaaagtcac
cctcctctgcagctaccctctgataatgtatcccaaatgctcactgtacctggccggcca
ggatctagtaggaagaagcacgaatcccgtgatgacaccctggaggaactcacttttacc
tctccactgccatccccatccagagactggcaaggaagtatgccagatcacatgggttca
ccaactagccagagcagtgcaatcatcaatgaccggctgcaggagctagtgaagctcttt
aaggacaggactgaaaaagtgaaggagaagctgattgacccagatgtttcttctgaagat
gaaagccccgtggcatcccctgccaagaaaaagcctccagaaccactgcctccaccccct
gctgaattaaaacctgaagctgcaaaagttgaagaggaggagcattactgtgagatgctt
tgctgcaaattcaaacgccgtccctggtttgacatcttgaagaattaccagttcccaagt
agcatagaccctctcaccaatctgatgtacgtgctgtggctgttctttgttgtaatggcc
tggaattggaactgctggctgattccagtccgttgtacctttccataccagacaccagat
aacatccattactggcttcttatggactatctctgtgacctcatctaccttctggacatc
cttgtctttcaggcccgcctacagtttgtcagaggaggagacatcatttgtgataaaaag
gaaatgagagaaaactacatgaaaactgaacgcttcaagatggacttgatctccctcatt
cctctggatatattttacttcaaagttggcgtaaattccctcttacgtttgcctcgctgt
ttaaagtacatggctttcttcgagtttaacaatcgacttgaagctattctgagcaaggca
tatatttacagagtgataaggaccacagcctatttactctactgcttacatgtgaactct
tgtctatactattgggcatcggcatttgaagggctgggttctacacactgggtgtatgat
ggggaaggaaacagttatatccgctgttattactgggctgtcaagaccctgattaccatt
ggaggcctcccagaccctcgaactctgtttgaaatagtcttccagcttgtgaactacttc
acgggagtctttgccttctctgttatgataggtcagatgagagatgtagttggtgccgct
acagcaggacaaacttattatcggagttgcatggacagtaccattaagtacatgaacttc
tacagaattcccagagttgttcagaaccgggtcaaaacatggtatgaatacacatggcag
tcacaaggcatgctagatgaaaccgagctgttggtgcagttacctgaaaagatgaggctg
gatattgccattgatgtgaactatgctatagtcagtaaggtggcgctcttccagggctgt
gatcggcagatgatttttgacatgctgaagaggctcaagtctgttgtttacttacctcat
gactacgtatgtaagaagggggaaattggccgagagatgtacattatacaggctggacag
gtgcaggtgcttggaggacctgatggcaaaactgtgcttgtgacactgaaacctgggtcg
gtgtttggagaaatcagcttgctggcagtgggaggtggaaatcgccgcacagcaaatgtt
gtggctcatggattcgctaatcttttcattctggataagaaggacttgagcgaaattttg
gtgcattatcctgactcagagaagcttctgcgtaagaaagcaaagaaaatgctgaaaaac
aacaataaacagaaagacgaaaaaggaatgcccaaagagacgctcatcattccaccgaga
cctgggacacctaaactcttccaagcggctctggtagctgcaggaaagatggcaaggaaa
ggaaagcttgcccacatcaggtggaaactaaaagagctgaaagcaatgcaggaaatgcag
gaggcagcttccgctccagttccaccaaaatcaccaatgcaccatcgatccccattggcc
tcccaccgcaagtcagaagaacaacaaactgaggaagttgtcactgtgacgggagatgat
tcggtctctttccgcatgactcctgccccacaaagtggggaacagattctcactgttgag
gttgtggagccagaagaaaagaaatga
DBGET
integrated database retrieval system
