Gavialis gangeticus (Gharial): 109290284
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Entry
109290284 CDS
T07453
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109290284 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109290284 (RNF43)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109290284 (RNF43)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109290284 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
KIAA1549
DUF5305
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109290284
NCBI-ProteinID:
XP_019362292
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLQVGLGHTGLAVAAAVESERSAAQKAIIRVIPLKVEPITL
EGVFANVAEVTPAEGKLLQFHPLSLCNTSEDEHTESGFITIVKLERPDRDLHPCLSLANK
AKLAGERGARAILFDITDDKTAADQLRKPRGLSQPVVLIWGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVIVIVLIFVIRTKCHFNRTQDSLQQQTMQAISQLATR
TYPVRCQRAPLWDSASSCSSAPMCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILDRTPLAQPMHSSQNPQDLELGQRLHLFQQHPGHALYHFSHVYGQSPRSFSS
HIPRGNPFFHSPELSQLDFNTVHYMPYRPAGPMPTCRHQPPLAQSLLIQQHRKPPACGQT
LSSHMTCPLQHQSSCLGIRTSLTPKQHHATALRWAASHGRQQNSSGSGESYLTEHSGYLA
DGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPLVYCSSEGPTTD
YGQDQPLPSREPRPRSLDFMVTGSAALPQPQILSHIHYHHHRHHHYRKGLECPSGRPGQD
SGQRKSRYSGAKMGLHSAQIQKKAEKVRHCPQHLERISLPQDALLSGQPSCLQQRHDPSK
TPSLSADQSDFSKVAVRPVGAAGSFPFQLSQKYSLQSRHHRRKKKGHLEPSLAHLPEDSD
MHKACNVHIHYGQPSGYSCSQEVQPLMSSGPLPYSSGSQVVWKCLVPHSNSEPQQQRQGL
SEQETKPIFPGDFSGTGTTEDNTGPYLHCQTLQHNQGSEEGIQDMYEHSV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctaatggccacc
cttcaggtaggacttggtcatacagggctggcagtcgccgcagcagtggagtcagagaga
tcagcagctcagaaggcaatcattagggtgatccccttaaaagtggaaccaatcacattg
gaaggagtgtttgctaatgttgctgaggttactccagctgaaggaaaactgctgcagttc
cacccgttgtccttgtgtaacaccagtgaggacgagcacacagagtcaggattcatcacg
attgtcaagctggaacgaccagatcgcgatctccacccatgcctatcgctggccaacaag
gcaaagctggcaggagaacggggagctcgtgccatcctctttgacatcacggatgataaa
actgctgctgatcagctgaggaagcccaggggcctcagtcagcctgtggttctgatctgg
ggtcatgacgctgaactactgatgggcgttgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccggactatgatgtgtggatcctccttacagtg
gtgagcactgtcattgtcatcgttttgatttttgtcattcgcaccaagtgtcatttcaac
aggactcaggattccttgcagcagcagaccatgcaggcgatcagccagctagccacacgt
acatatccagtccggtgccaacgggcccctctgtgggattcagcaagcagctgcagctca
gccccaatgtgtgctatctgtctggaggagttcagtgagggtcaggagctgcgcatcatt
tcctgttcccatgagttccaccgagagtgtgttgacccctggctgcagcagcaccacacc
tgtccactctgcatgttcaacatcctcgacaggaccccacttgctcagcccatgcattcc
agccagaacccccaggacctggagcttggacagcgcctccacctcttccagcagcatcca
ggacatgccctttatcacttctcacatgtctatggccagagccccagaagcttttcctca
catattccccgtggcaaccccttcttccattccccagagctctcccagctggattttaac
accgtgcactacatgccatacaggccagcaggccctatgcccacatgcagacatcagccc
ccactggcccaaagtcttctcattcagcagcaccgcaagcctccagcatgtgggcagaca
ttgtcttctcacatgacttgtccccttcagcaccagtcctcttgtctggggatcaggact
tccctcacaccaaagcagcaccatgctactgctcttcgttgggcagccagtcatgggagg
cagcaaaacagcagtggctcaggagagagctacctcactgagcacagtggctatctggca
gatggtccaggcagtgactccagctcggggccctgtcatggttcctccagtgactccatg
ttgaactgcacagatgtcagcctccagggcatccatggcagctgttctaccttccgcagc
tctctgagcagtgactatgaccctttagtgtattgcagctctgaaggaccaaccactgac
tatggccaggaccagcccctgccttcaagagagccaaggccaaggtctttggactttatg
gtgactggcagtgctgccctgccccagcctcagatacttagccatatccattatcaccac
cacagacaccatcactacaggaaaggcctggaatgtccatctgggagaccaggccaggac
tctggccagcgcaagtccagatattctggggccaaaatgggcttgcacagtgctcagata
caaaagaaggctgagaaagttcgtcactgcccgcagcatcttgaaaggatctctttacct
caggatgcacttctttcaggacagccttcctgtctgcagcaaagacatgacccctcaaaa
accccttccttgtctgcagaccagtctgacttcagcaaggtggccgtcagaccagttgga
gcagctggttcattccctttccagctgtcccagaaatacagcttacaaagtcgtcatcac
agaaggaaaaagaagggccacctggagccttccctggctcaccttccagaggactcagac
atgcacaaagcctgtaatgttcacattcactatggtcaaccctctggctatagctgctcc
caagaagttcagccactcatgtcaagtggccctttgccctattcctcaggctctcaggtg
gtttggaagtgcctagtcccacactcaaactcagaaccccagcagcagagacaaggacta
tcagaacaggagaccaagcccatatttccaggtgatttctcagggacaggcacaacagaa
gacaacacaggtccctaccttcactgccaaactctgcaacataaccagggatctgaagag
gggatccaagacatgtatgaacattcagtttaa
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