Gavialis gangeticus (Gharial): 109290373
Help
Entry
109290373 CDS
T07453
Symbol
DEPDC5
Name
(RefSeq) DEP domain-containing protein 5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109290373 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109290373 (DEPDC5)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
109290373 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Las1
FGGY_N
Motif
Other DBs
NCBI-GeneID:
109290373
NCBI-ProteinID:
XP_019362385
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELMVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEIHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSCPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGKKPLIERAKNSRDSSLGAPKDAENALPIQLDYDGYDAQVFRLPGPSRAQRCTT
FSRSVRERESRTRKSSSSYDVSSSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRLH
LHQYEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQRDLTHSSAELL
ELAYHEATGRHITSRHPGDSISCLTFGGAEEFSNSLVNSNNAGMNLRTQNKDTVEDAVST
SPDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLP
EADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKPQKPTTTVPPPLSSSPLYSRG
LVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHLDS
EFVFCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACITATKRI
MEGEVHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGAAMKGLQMAG
PISTHSLEQPGPPIGKKGTSALSALLEMEASQKTLGEQQAAMLAGKSSAQPTESGSIAIT
PTYMDSPRKDGAFFMEFVRSPRTASAFYPQVSVDQTAPATLDGSTGQSAERGSAQALGSS
QSIGDQGYATTGSAENSSQQCSVNSLTSSSTLIEILEAMKHPTTGIQLLSEQKGLSPYSF
ISAEVVHWLVNNVEGVQTQAMAIDIMQKMLDEQLIVHASGEALRTFIYGFYFYKIVVDKD
PDRVGMQQPPMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPASYASR
HSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEI
KLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNVS
CLLKEGSEHLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAENKPQYIHVT
GTVFLQLPYSKRKFSGQQRRRRNSTSSANQNMFCEERVGYNWAYNSMLTKTWRSSATGDE
KFADRLLKDFTDFCWNKDNRLVQFWTDCLDKMHASAP
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtctacaagcttgtcatacacaagaagggcttcgggggcagtgat
gatgaactgatggtgaaccccaaagtgtttcttcagatcaaactgggagatgtggtggag
attgcacaccccaatgatgagtacagccccctgctgctgcaagtgaagtctttaaaggaa
gatttgcagaaagaaactataagtgtggatcagactgttgctcaggtattccgactgaga
ccataccaggatgtccatgtgaatgttgtggacccgaaggatgtgacccttgacctggtg
gagcttacctttaaggatcagtacattgggcgtggggatatgtggcgactgaagaagagc
ttggtcagcacatgtgcctacatcactcaaaaggtggaatttgctgggatacgggcacag
gctggtgagctgtgggttaagagtgagaaggtcacatgtgggtacatcagtgaggataca
cgggtggtgttccgctcaacttcagccatggtttatatctttatccagatgagctgtgaa
atgtgggattttgacatctatggggacctgtactttgagaaagctgtgaatggtttcctt
tctgatctcttcaccaaatggaaggagaagaactgcagccatgaagtgacagtggttcta
ttttctagaactttttatgatgcaaaatcaatagatgagtttcctgagatacatcgtgcc
tcaattcggcaggatcatgagggaagattttatgaagacttctacaaggttgtggttcag
aatgagagacgagaagagtggacatcattgcttgtgactattaaaaaactcttcatccaa
tatcctgtgctggtgcggctggagcaggcagagggcttccctccaggttacaattctact
tcagcacaagggaactacctggaggccataaatctttctttcaatgtgtttgacaagcat
tacataaaccggaactttgaccggactggacagatgtctgtggttatcacacctggggtg
ggtgtgtttgaagtggaccggcttcttatgatcctgaccaagcagcgaatgatagacaat
ggtattggtgtggacttggtatgtatgggggagcaaccgctgcatgctgtaccactcttt
aagcttcacaatcgcagttgtcctggagattctcgcttgggagatgactacaatattcca
cactggataaaccacagtttctacacatccaaaagccagcttctgtgtaacagtttcact
ccacggatcaagctggcaggaaagaagccactgattgagagggcgaaaaacagcagagac
tcctcattaggggcacctaaggatgctgagaatgcccttcccatccaacttgattatgat
ggctatgatgcccaagtgttcaggcttcctggtccatccagagctcagcgctgtaccact
ttcagcaggtctgtaagggagagagagagtcgcaccaggaagagctctagttcttacgat
gtctcatcgagcccttccctgcagagtcgcactctgcccccagaggaggtgaggagccag
gcttctgatgacagctccctgggcaagatctccaacatcctaatgatcccacgacttcat
ctgcatcaatatgaagtcagcagctccttgggctacaccagcaccagagatgttcttgag
aatatgctggagtcacagcagcgagactccagcgcgccagggaggttccatgtaggcagc
gcggaatccatgctgcacattcggcctggtggatatacaccacagcgtgcgttaataaac
ccctttgcgccctctcgcatgcccatgaagcttacatccaacaggaggcgctggatgcac
acatttcctgtgggtccatcgggagaagcaatccagatccaccaccagactcgccagaac
atggcagaaatgcagggcaacgggcagcgggatttgactcactcctctgctgaactgctg
gagcttgcttaccacgaggcaactggcaggcatatcacttctcgtcatccaggtgacagc
atctcctgcttaacctttggtggagcagaggagttctcaaacagtttggtcaacagcaac
aatgcagggatgaacctccggacccaaaacaaggatactgtggaagatgctgtttccact
tctccagatccgattctgacgctgtctgctccccccgtagtgccaggcttctgttgtaca
gttggggtggactggaaatctctcactactccggcatgcctccctcttaccacggactac
ttcccggaccgccagagtttgcagaatgactacactgagggctgctatgatctgctccca
gaagctgacattgacaggagggatgaggaaggagtgcagatgacagcccagcaggtattc
gaggagttcatttgccagcgtctcatgcaaggatatcaaattattgtgcaacccaaacca
cagaaaccaactaccactgtaccaccccctctcagcagcagccccctctacagccgaggc
cttgtatcacgaaatcgacctgaggaagaagaccagtactggctgagcatgggccgcact
ttccacaaagtgaccctaaaggacaaaatcattactgtcactcgataccttccaaagtat
ccatatgaatctgctcaaataaactacacatacagtttgtgcccttcccacttggactct
gaatttgttttctgctgggtagagttctcccatgaacggttagaagaatacaaatggaat
tacctggatcagtatatctgctctgctggctctgaggacttcagtcttattgagtcgctg
aaattctggaggacacggttcctgctgcttccagcctgtataactgccacaaagcgcatt
atggaaggcgaagtccactgtgatgtatatggagacaagccccgctctgatgaggaggaa
tggcaactcttggatggcttcatccgctttgtggagggtttgaatcgtattcgtcggcgt
caccgatcagaccgaatgatcagaaaaggagcagccatgaagggtttgcagatggctggt
ccaatttccacccactctctggagcagcctggacctcctattgggaagaaaggaacctca
gcgctgtctgccctgctggagatggaagccagtcagaagacattgggggagcagcaagca
gcaatgcttgctgggaagagctctgcacaacctactgagagtgggagcattgccatcaca
cccacctacatggacagccctcgcaaggatggggccttctttatggagtttgttcgcagc
ccacgcacagcttcagccttctatccacaggtgtctgtagatcaaacagctcctgctacc
ttagatggcagcacaggccaatcagctgagaggggcagcgcccaggccctaggaagttcc
cagagtataggagaccaaggatatgctacaactggttcagccgagaacagctcccagcag
tgttctgtgaactcactaacttcttcatccactctgattgaaattcttgaagccatgaag
catcccactacagggatacagctgctgtctgaacagaaaggcctctccccatactccttc
atcagtgctgaagtcgtccattggcttgtgaacaatgtggaaggagtgcagactcaggca
atggctattgatatcatgcagaaaatgctggatgagcagttgattgtccatgcttctgga
gaggccttgcgcaccttcatctatgggttttatttttacaagattgtcgttgataaggac
ccagacagagtaggtatgcagcagcctcccatgtggcacacagcagcaatggatgacttc
tctgccttccagaggaaatggtttgaggtggcatttgtggcagaagaactcttgcactca
gaaatcccagcattcctcctaccttggcttcccagccgtccagcctcctatgcaagtagg
cacagttcctttagccgcagtttcggaggacggagccaggcagctgcactattagctgct
acagtgcctgaacaacgcacagtgacactggatgtcgatgtgaataaccgcactgaccgc
ttggagtggtgcagctgttattaccatggcaatttctccttgaatgctgccttcgagatc
aaattacattggatggcagtgacagcagcagtcctttttgagatggttcagggttggcat
cggaaagccacatcctgtggcttcttgctggttccagtcctagagggtccatttgcattg
cccagttacctgtatggagacccactccgagcacagctgttcatcccacttaatgttagc
tgcttgctaaaggagggcagtgaacatctgtttgacggttttgaacctgaaacttactgg
gatcgcatgcatctactccaggaggcaattgcatacagatttggatttgtgcaggataaa
tactcagcctctgcattcaacttcccagctgagaacaagccccaatacatccatgtcacg
gggaccgtgtttctgcagctgccttactccaagcggaaattctctgggcagcagcgacgg
cggcgcaactccaccagctcagccaaccagaacatgttctgtgaggagcgcgtaggatac
aactgggcctacaatagcatgctgaccaaaacatggaggtccagcgccactggggatgag
aagttcgctgatcggttgctgaaggacttcacggacttctgttggaacaaagacaaccgg
cttgtccagttctggacagactgtctagataagatgcatgctagtgcaccctga
DBGET
integrated database retrieval system
