Gavialis gangeticus (Gharial): 109290424
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Entry
109290424 CDS
T07453
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04142
Lysosome biogenesis
ggn04144
Endocytosis
ggn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109290424 (CLTCL1)
04142 Lysosome biogenesis
109290424 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109290424 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109290424 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggn04147
]
109290424 (CLTCL1)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109290424 (CLTCL1)
Exosome [BR:
ggn04147
]
Exosomal proteins
Proteins found in most exosomes
109290424 (CLTCL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
109290424
NCBI-ProteinID:
XP_019362467
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNVKPSTLFCFAVRSPAGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYSEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRSVMRVSPEQGLQFAQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNCPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYDERMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFA
KVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFNKVDKL
DASENLRKEEEQVAEPTPIVFAMFSPLELTLLCCSPNCRTCSVGTEALRPAADANSRAKC
STSPGKLPLWIHSTRIHSATCLRLQYVTSSLTDLRWVLSLPVPLTFFLQEAYDGPKGTDD
PLAKRYFFCCPAR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctatacgcttccaggagcacttccagctccaaaacctggggatt
aacccagcaaacattggattcagtaccctgacaatggaatctgacaaattcatctgcatc
agagagaaagtaggagagcaagcacaagttgtgataattgacatgagtgatccaaccact
cctatcagacgcccaatctctgcagaaagtgccatcatgaatccagcttctaaagtaatt
gctctgaaagctgggaagacactccagatctttaacattgagatgaaaagtaaaatgaaa
gcccacaccatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagaaactgctgtctaccactggagcatggagggagaatctcagccccagaag
atgtttgacaggcatgccagtctggcaggctgccagattataaactacaggactgatgaa
catcaaaaatggctgctacttattggaatttcagctcagcaaaatcgtgtcgttggtgca
atgcagctctactcagttgacagaaaagtctctcaacctattgaaggccatgcagcagcc
tttgcagaattcaaaatagaaggaaatgtcaagccttccacactcttctgctttgctgtg
aggagtcctgcaggaggcaagctgcatataattgaagtaggtcaacctgctgctggaaac
cagccctttgttaagaaagctgttgatgtatttttccctcctgaggcacagacggatttt
cctgtggcaatgcagattggagccaagcatggagttatatacctaatcacaaaatatgga
tacatacatatgtatgacttggaatctggagtgtgcatttacatgaaccgtattagtgct
gacactatttttgtcactgctcctcatgagcctacctctggcatcattggtgtgaacaag
aaaggacaggtgctttcagtttgtgtagaagaagacaacattgtgaattatgctacaaat
gttctccagaatccagacctgggtctgcgtatggcaatccgcagtaacctggctggggca
gaggaactctttgccaggaagttcaatacactctttgcacaaggaagctattcagaagct
gctaaagtagcagcatccgcaccaaagggcatcctgcgtaccagtgacactatcagaaag
tttcagagtgtgccagcacaaccggggcaggcctcgcccttgctgcagtactttgggatc
ttgcttgatcaggggcaactcaataagtttgagtccttggaactctgccgtcctgtcctg
caacaaggccggaagcagttgctggagaagtggttgaaggaagataagctggaatgttca
gaggagcttggagacttggtgaaggctgctgaccccacccttgcactcagcgtttacctt
cgtgctaatgtgccgaacaaagtcattcagtgctttgcagaaactggccaattccagaaa
atagttctttatgccaaaaaggttggctatacaccagattgggtcttcttgttgagaagt
gtaatgagagtcagtccagaacagggtctgcagtttgctcagatgctggtgcaggatgaa
gagccactagccaacattaaccagattgtagatgtattcatggagaacagtctgattcag
cagtgcacttcctttctgttggatgcactgaaaaacaactgccctgctgaaggacatctc
cagacccgtctactggaaatgaacctaattcatgcaccccaggttgcagatgccattctt
gggaaccaaatgtttacacactatgatcgtgctcacattgcccagttatgtgaaaaggca
ggcttgctgcagagagccctagaacactacactgacctctatgatatcaaacgtgctgtt
gttcacacgcaccttttgaaccctgagtggcttgtgaacttctttggctccctgtcagtt
gaggactctgtagagtgtctgcgtgcaatgctgtcggccaacatcaggcaaaatctgcag
ctgtgtgtgcaggtggcttctaaataccatgagcagcttggcacccagtctcttgtggag
ctctttgaatctttcaaaagttatgaaggactattctacttcctggggtcaattgtgaac
ttcagccaggatcctgatgtccacttcaagtatatccaagcagcttgcaagactggccaa
atcaaggaagtggaaaggatctgtcgtgaaagtaactgctataaccctgaacgagtgaaa
aactttctgaaggaggccaagctcacagaccagcttcctctgatcattgtgtgtgaccga
tttgactttgttcatgatctggttctctacttgtaccgcaacaacctacagaagtacata
gagatctatgttcagaaggtgaatccaagccgtataccagcagttgttggagggctgctt
gatgtggattgttctgaggatgttattaagaacttgattatggtggttagaggccagttc
tcaacagatgagttggtggctgaagtggaaaaaagaaataggctcaaattgctgctgcca
tggcttgaatctagaattcatgaaggctgtgaagaacctgccacccacaatgctctggcc
aaaatctacattgacagtaataacaacccagagcggttcctccgtgagaatccttactat
gacagccgtgttgtaggcaaatactgtgaaaaaagggacccgcacttggcctgtgttgct
tatgagaggggccagtgtgatcttgaacttattaaggtttgtaatgagaactccttgttc
aagagcgaggcccgctaccttgtacgcaggaaggatccagaactttgggcgaacgttctt
gaagaaaacaatccattcaggcgacagctcattgatcaggttgttcagacagctttgtca
gagacgcaggatccagaagaggtttctgttacagtgaaagccttcatgactgcagatctt
cccaacgaactaattgagctgctggaaaagatagtattggacaactctgtgttcagtgag
cataggaacctgcagaatctactgatcctgactgccattaaggctgatcgcactcgtgtg
atggaatacatcaatcggttggataactatgatgccccagacattgcaaacattgctatc
agcaatgagctgtatgaagaagcctttgccatctttcggaaatttgatgtcaacacatct
gcaatacaagtgctgatagagcatataggcaaccttgaccgtgcttatgaatttgctgag
aggtgtaatgagccagctgtctggagccaactagccagagcacagcttcagaaagacctg
gtgaaggaagccattgactcttacataaaggctgatgatccctctgcttacatggaagtg
gttcaggcagctaatagaaataacaactgggaggatctggttaaattcttgcaaatggcc
aggaaaaaggcccgagagtcttatgtggaaactgaactcatttttgctttggcaaaaacc
aaccgcctgtcagagctggaggagttcattagtggtcctaacaatgcccatatacaacag
gttggtgatcgctgctatgatgaaagaatgtatgaagcagccaagctgctctacaacaac
gtgtctaactttggtcgtttggcatctaccttggtgcaccttggagagtaccaggcagca
gtggacagtggccgcaaagccaacagcaccaggacatggaaggaggtgtgctttgcctgt
gtggatggaaaagaattccggctggcacagatatgtggcttgcatatagtaatccatgct
gatgaacttgaagagctgattagctactatcaggatcgcggctattttgaagagctgatt
gctctcttggaagctgctttaggccttgagcgtgctcacatgggaatgttcacggaattg
gccatcttgtactccaaattcaagcctcagaagatgagagaacatctagaactcttctgg
tctagagttaacattccaaaggtgctcagagctgctgaacaggctcacctctgggcagaa
ctggtcttcctgtatgacaagtatgaagagtatgacaatgcaataatcacaatgatgaac
catcccactgatgcttggaaagaaggacagttcaaagatataattgccaaggtggccaat
gtggagctgtattacaaagccctgcagttctatttggactacaaacctctcctgatcaat
gatcttctgctggtgttatctccacggctggaccacaccagaacagttagcttctttgca
aaggtaaatcagttgcctctagtgaagccttacctgcgctcagtccagaaccacaacaac
aaaggagtcaatgaggctctaaacaaccttctgacggaagaagaggactaccagggtttg
agagcttctattgatgcttatgacaactttgataacatcacactggctcagcgtctggag
aagcatgaactgattgaattcaggcgtattgcagcatacttgtacaaggggaacaatcgc
tggaaacaaagtgtggaactctgcaagaaggatcgtctctacaaggatgctatgcagtat
gctgcagagtctaaagatgcagagctggcagagaaactgctccagtggttcctggaagaa
gggaagcaggaatgttttgcagcttgtctcttcacatgctatgacttactgcatccagat
gtagtccttgagttggcctggaggcataacatcatggactttgcaatgccttattttatc
caggtgatgagggaataccttaccaaagttgatgggctgtttaataaggtggataaactt
gatgcttctgaaaacctaaggaaagaagaggaacaagtagctgaacccactccaatagta
tttgctatgttctccccactggagcttactcttctttgctgctccccaaactgcaggact
tgtagtgtgggaacagaagccttgaggccagcagctgatgctaacagcagggccaaatgc
agtacctccccaggcaaacttcccttatggatacacagcaccaggattcactcagccacc
tgtttacggcttcaatatgtaactagttctctgacagaccttcgctgggttctctccctt
cccgtccctctgactttttttctccaggaagcatatgatggtcctaaaggcacagatgat
cctctggccaaacgctactttttttgctgccctgctcggtga
DBGET
integrated database retrieval system
