Gavialis gangeticus (Gharial): 109290511
Help
Entry
109290511 CDS
T07453
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggn03009
]
109290511 (DDX55)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109290511 (DDX55)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
Pre-60S particles
Helicases
109290511 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109290511
NCBI-ProteinID:
XP_019362669
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MEAVTEGMWEALPAPLSPGVLRTLRALRFPRMTPVQSATIPLFMNNKDVAAEAVTGSGKT
LAFVIPILEILLKREEKLKKMQVGAIIITPTRELAVQIDEVLSHFTKHFPQFSQILLIGG
TNPVEDIEKFKEHGGNIIVATPGRLEDMFRRKADGLDLVRCVKSLDVLVLDEADRLLDMG
FEASINAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPT
RLENYYMICRADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESMVKNAKIMCIH
GKMKHKRNKIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPRSASAFVHRCGRTA
RIGHVGSALVFLLPMEESYVNFLSINQKCPMQEMKPPKNMVDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECSLIFRIKDLDFASLARGFALLRMPKMPELKGKSLSDFIPVSFD
TDTITFKDKNREKQRQKLLEQQRKEKQENEGKKKFIRNKAWSKQKAKKEKKKKMTAKRKR
EEGSDLEDEDLEELLNDTRLLKRLKKGKISEEEFEKRLMGSERKVKMEVITDSESED
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcaccgaggggatgtgggaggcgctgcccgcgcccctcagtcccggcgtc
ttgcgcaccctgcgggccctgcgcttcccccgcatgacccccgtgcagtccgcaaccatt
cctctgttcatgaataacaaggacgttgctgcagaagcagtaacgggcagtggaaaaacg
ttggcgtttgtgattcccatactagaaattcttcttaaaagggaagaaaagttaaagaaa
atgcaggttggagccataatcatcacgcccacaagagaattagctgttcagattgatgag
gtgctctcacatttcactaaacattttccccagtttagtcagattctattaatcggtggt
acgaatcctgtagaagatattgagaagttcaaagaacatggagggaacatcattgtagct
acccctggccgtttggaggatatgttcagaagaaaagcagatgggctggatttagtacgt
tgtgtgaaatcacttgatgtgctggtattagatgaagctgacaggcttctagacatggga
tttgaagcaagcataaatgccattctggactttttgcccaagcagagacggacaggtctg
ttctcagcaactcagactcaagaagttgagaatctggtgagagctggtctccggaatcct
gtccgcatatcagtgaaggagaagggagttgcagcaagcagtacccagaaaacccccaca
cggcttgagaactactacatgatatgcagagcagatgaaaaattcaatcagctggtgcat
tttcttcgacaacacaagcaggaaaaacatctggtctttttcagtacctgtgcctgtgtg
gaatattatgggaaggccctggagtccatggttaaaaatgcaaaaataatgtgcattcat
gggaaaatgaagcacaaacggaacaagattttcacagagtttcgtaaactcccgagtggc
attttagtttgcactgatgtgatggccaggggcatcgacattccagaagtaaattgggtt
ttacagtatgacccccctcgcagtgcaagtgcctttgtgcatcgctgcggtcgaacagct
cgaattggccatgtaggcagtgcacttgtatttttgcttcccatggaagaatcctatgtt
aattttctctcaataaaccaaaagtgtcccatgcaggaaatgaaaccaccaaaaaacatg
gtagatcttcttccaaaactgaagtcgatggctctggcagacagagcagtatttgagaaa
gggatgaaagcatttgtatcttacgtgcaggcctacgctaaacacgagtgcagtctcatc
ttccgaataaaagatctggactttgcgagtcttgccagaggttttgctcttttgaggatg
ccaaagatgcctgagttaaaaggaaagtccctttcagactttattccagtcagttttgac
acagacaccattacattcaaagacaaaaacagagaaaagcagaggcagaaactgttagaa
caacaaagaaaggaaaaacaagaaaatgaagggaaaaagaaattcatacggaataaagcc
tggtcaaagcagaaagccaagaaggagaagaaaaagaaaatgacagctaaaaggaaaaga
gaagagggctctgacctcgaagatgaagacctggaggagctgctgaatgatacaagactc
ttaaaaaggttaaaaaagggtaaaattagcgaggaagagtttgagaagaggctgatgggc
agtgaaagaaaagtcaaaatggaagtaataactgattcagagtctgaagactga
DBGET
integrated database retrieval system
