Gavialis gangeticus (Gharial): 109290632
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Entry
109290632 CDS
T07453
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ggn03037
]
109290632 (TTC28)
Cilium and associated proteins [BR:
ggn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
109290632 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_NPHP3
TPR_16
TPR_19
TPR_9
TPR_17
TPR_11
TPR_6
ANAPC5
AP4E_app_platf
Nup188_N-subdom_III
DUF3856
Motif
Other DBs
NCBI-GeneID:
109290632
NCBI-ProteinID:
XP_019362902
LinkDB
All DBs
Position
Unknown
AA seq
2423 aa
AA seq
DB search
MLSKAEFVEKVRQSNQACHDGDFHTAIMLYNEALGVDPQNCILYSNRSAAYMKIQQYDKA
LDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAM
KSPMRESLEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLK
LRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYR
EALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDEL
SEARELGNMGAVYIAMGDFENAVQCHEQHLGIAKAMGNQREEARAYSNLGSAYHYRRNFD
KAMSYHNHVLELAQELAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLRIAESLQDRA
AEGRASSNLGIIHQMKGDYDTALKLHKTHLSIAQELNDYAAQGRAYGNMGNAYNALGMYD
QAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQ
SEARALSNLGNFHCSRGEYVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYE
EAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALTDFGRAEECQKYLLSLAQSLNNSQ
AKFRALGNLGDIFVCKKDVNGAIKFYEQQLGLAHHVKDKRLEASAYAALGSAYRMIQKCD
KALGYHTQELEVYQELGDMPGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPS
IEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNEAVLDRGRAYGNLGDCYEALG
DYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELG
EAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMG
EYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMN
DLVAKTLSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASG
NLEESQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAV
AERGRTRAFADLLVERQTGQQDSDPYSPVTIEQVLETVNGQRGLVLYYSLAAGYLYSWLL
APGAGILKFHECYLGDSAAESAGDFHEASSVNLQATTSSGLEMYISSVREALGVDSYYTR
ACASSETESEAGDIMDQQFEEMNNKLNSVTDPTGFLRMVSRNNLVNRSCQSMTSLFSSTM
SPMKDGASSLPRRQAPFSKPPLRALYDLLVGPMEGGLMHSSGPVGRHRHLILVLEGELYL
IPFALLKGSSSNEYLYERFSLIAVPSIRSLNPSSKSHLRKNAPAYSSSTSMAAVIGNPKL
PATVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGAAATKERVMSALSQAECVHFATHVSW
KLAALVLTPNADSNPASSKSSFGNPYTIPESLRVQDDASDVESISDCPPLQEFLLTAADV
LDLRLPIKLVVLGSYQESNSKVTADGVIGLTRAFLAAGAQCVLVSLWPVPVAASKMFVHA
FYSALLNGMKASAALGEAMKTVQSSKPFSHPSNWAGFVLIGSDVKLNSPSSLIGQALTEI
LQHPERARDALRVLLHLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFR
LDPPASGLPAAVFFPTTDPGERLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINR
AVKNMVGMLHQVLVQLQAGEKEQDFSTAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQ
EEVILKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQY
QNPPFSPTCPDSLASDAISVYSLSSIASSMSFASKPESVSEGAGHRGRQDYERPKNVYPH
RPPGPRSQLSPQTNPAGSKDDEEYEGFSIISTEPLAGYPDDAKARFSPDHKQSKAGQMGE
AKASVSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDNNQKLD
PQELAQKILEETQSHLLAVERLQRSGSQASKSSSPADGATTPTSTSAFRSSETSAFSRPV
SSGNKSQPSPVTMKPKPPTRSSSLQKVSSGYNSPTMSETSNKDGTGQSSGQPSPSADLHS
SLIEQPHFKLKYPSSPYSGHISKSPRNISPSSGHQSPVGSTPSPALSYSSAGSARSSPAD
APDIDKLKMAAIDEKVQAIHNLKMFWQSSPQHSPGPMKIFRGAPGTMTSKKDVLSLLNLS
PRHSKEESVDKLELKDLSVPRHLASPQKNPPNGHRRPEATHAGASSPPPPPSSTPGTARP
LRLPSGNGYKFLSPGRFFPSSKC
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcaaggctgaatttgttgagaaggttcgccagagcaaccaggcctgtcacgat
ggcgactttcacacggctatcatgctgtacaatgaggccctgggagtcgatcctcagaac
tgcatcctctacagtaaccgatctgcagcatacatgaaaatccagcagtatgacaaggca
ctcgatgatgcaatcaaagcacgacttctcaatcctaaatggcccaaggcatacttccga
cagggtgttgcccttcagtaccttgggcgccatgcagatgcactggcagctttcgcgtcg
gggttggctcaggaccccaagagcctgcagcttctggttgggatggtggaagccgccatg
aagtctcccatgcgagagtccctcgagccgacgtaccagcagctgcagaagatgaagctg
gacaagagcccctttgtggtggtgtccgtcattggccaggagctcctgaccgcaggccat
cacggtgcctctgtggttgtgttggaagccgccctgaagataggcacctgcagcctgaag
ctgaggggatcggtgttttctgcgctgagcagcgcttactggtctctggggaataccgag
aaaagcaccggatacatgcagcaggacttggacgtagccaagactttaggtgaccagaca
ggagaatgccgagctcacgggaacctgggctccgcattcttctccaaaggaaactaccga
gaggccctcactaaccacaggcatcagctggtgctcgctatgaaactcaaggacagagag
gcagcatcctcggccctgagcagcctgggccacgtgtacacagccatcggcgactacccc
aacgcgctggccagccacaagcaatgcgtcctgctggccaagcagtccaaggacgagctc
tcggaggcccgggagctgggcaacatgggggcagtgtacatcgccatgggggactttgag
aacgccgtgcagtgccacgagcagcacctcggcatcgccaaggccatgggcaaccagcgt
gaggaggcgcgcgcctacagcaacctgggcagcgcctaccactaccggcgcaacttcgac
aaggccatgtcctaccacaaccacgtgctggagctggcccaggagctggccgagaaggcc
atcgagatgcgcgcctatgccgggctgggccacgctgcccgctgcatgcaggacctggag
agggccaagcagtaccacgaagagcagctgcgcattgccgagagcctgcaggaccgagcc
gccgagggcagagcctcttccaacctagggataatccaccagatgaaaggcgactacgac
actgcattgaaactgcacaagacccatctgtctatcgcccaggagctgaacgactacgct
gcccagggcagggcctacggcaacatgggcaacgcctacaacgccttgggcatgtacgac
caggcggtgaagtaccaccggcaggagctgcagatctccatggaggtgaacgaccgggcc
tcccaggcctccacgcacgggaacctggcggtggcctaccaagctctgggtgcccacgac
cgggccctgcagcactaccagaaccacctcaacattgcccgggagctgcgggacatccag
agcgaggcccgggccctcagcaacctgggcaacttccactgctcgcgcggggagtacgtg
caggctgccccctactacgagcagtacctgcgcctgtcccccgagctgcaggacatggag
ggcgaggggaaggtctgccacaacctgggctatgcccactactgcctgggcaactatgag
gaggcggtgaagtactatgagcaggacctggccctagccaaggacctgcacgacaagctg
agccaagccaaggcctactgcaacctgggcctggccttcaaggctctgacggactttggc
agggccgaggagtgccagaagtacctgctgtccctggcccagtccttgaacaattcccag
gccaaattccgcgccctggggaacctgggggacatttttgtctgtaaaaaggatgtaaac
ggtgcaataaagttctacgagcagcagctgggcttggcccatcacgtcaaggacaagagg
ctggaggccagcgcctacgcagccctgggctctgcctaccgcatgatacagaagtgcgac
aaggctttgggctaccacacgcaggagctggaggtgtaccaggagctgggggacatgcca
ggcgagtgccgagcccacggccacctcgcggccgtgtacatgtccctggggaagtacacc
atggcgttcaagtgttatgaggagcagttggagctcgggcagaagctgaaggaccccagc
atcgaggcccaggtctacggcaacatgggcatcaccaagatgaacatgaacgtcatggag
gaagccatcggctacttcgagcagcagctggccatgctgcagcagctcagcggcaatgag
gcggtgctggaccgaggccgggcctacgggaacctgggggactgctatgaggcgctgggg
gactacgaagaagccatcaagtattacgagcagtacttgtcagtagcgcagagcctgaat
cgcatgcaggaccaggccaaggcctaccggggcctggggaacgggcacagggccatgggc
agcttgcagcaggcgctcgtgtgcttcgagaagcggctggtggtggctcatgagctgggc
gaagccttcaacaaggcgcaggcctacggggagctggggagcctgcacagccagctgggg
aactacgagcaggccatctcctgcctggagcgccagctcaacattgcccgggagatgaag
gaccgggccctggagagcgacgcggcctgcggcctggggggcgtctaccagcagatgggc
gagtatgacacggcgctgcagtaccaccagctggacctgcagatcgctgaggagaccaac
aaccccacgtgccagggccgggcttacgggaacctggggctcacctacgagtcgctgggc
acctacgagagggccgtggtctaccaggagcagcacctcagcatcgctgcccagatgaac
gacctggtggccaagacgctgtcctacagcagcctcgggcggacgcaccacgccttgcag
aactactcgcaggccgtcatgtacctgcaggaaggcctgaggctggcggagcagctgggc
cgcagagaggacgaagccaaaatccgccacggcctgggcctctccctctgggcgagcggg
aacctggaggagtcgcagcaccagctctacagggcatctgcactgtttgagaccatccgg
cacgaggcgcagctgagcactgactacaagctgtcgctctttgacctgcagacgtcgtcc
taccaggccttgcaacgggtccttgtcagcctgggccaccacgatgaagccttggccgtg
gcagagagagggaggacaagggccttcgcggatctgctggtggagcgtcagacggggcag
caggactccgacccctattctccagtgaccatcgagcaggtcctggagacggtgaatggg
cagaggggacttgttctctactactcgctggctgcaggctacctgtacagctggctgctg
gcccccggggcagggatcctgaaattccacgagtgctacctgggggacagcgcggcggag
agcgccggggacttccacgaagccagcagcgtcaacctccaagcaaccaccagctctggg
ctggagatgtacatctccagcgtgcgagaggcactgggcgtggactcctactacacccga
gcctgcgccagcagtgagacggagagcgaggccggggacatcatggaccagcagtttgag
gagatgaacaacaagctgaactcggtgacggaccccaccggcttcctgaggatggtcagc
aggaacaacctcgtcaacaggagctgtcagagcatgaccagcctgttcagcagcaccatg
tcgcccatgaaggacggggcgtcctccctgccccggcgccaggcccctttcagcaagcct
ccactgcgggcgctctacgacctgctcgttgggcccatggaggggggcctgatgcactcc
agtggccccgttggccggcaccgccacctgatcctcgttctcgagggagagctctacctg
atccccttcgccctcctgaagggcagctcgtccaacgagtatctctatgagcgcttcagc
ctcatcgctgtcccctccatccggtctctgaaccccagctccaagtcccacctgaggaag
aacgcccctgcctactccagctccacctccatggcagccgtcatcggcaaccccaagctg
ccagccaccgtgatggacaggtggctgtggggacccatgccgtccgcggaagaggaggcc
tacatggtgtcagagctgctgggctgccagcccctggtgggcgccgcagccaccaaggag
cgggtcatgagcgcgctgtcgcaggcagagtgcgtgcacttcgccacccacgtctcctgg
aagctggccgccctggtgctcacccccaatgccgacagcaacccggccagcagcaagagc
tctttcggcaacccctacaccatccccgagtccctccgtgtgcaggacgatgccagcgac
gtggagagcatctcggactgcccgcccctgcaggagttcctgctcacggccgccgacgtc
ctggacctgcggctgcccatcaagctcgtggtgctcggctcctaccaggagtccaacagc
aaggtcacagccgacggggtcatcggtctgaccagggccttcctggcggccggcgcacag
tgtgtcctggtgtcgctctggcccgtgcccgtggctgcctccaagatgtttgtgcatgcc
ttctactccgccctgctcaacggcatgaaggccagcgccgccctcggcgaggccatgaag
accgtgcagagcagcaagcccttctcccacccctccaactgggcaggcttcgtgctcatt
gggagcgacgtgaagctgaacagcccatcctcgctgatcgggcaggcgctgacggagatc
ctgcagcaccccgagagagcccgcgacgcgctgcgtgtcctgctgcatctggtggagaag
tcgctgcagcgaatccagaacgggcagcacaactccatgtacacctcccagcagagcgtg
gagaacaaagtggggggcatcccgggctggcaggcgctgctcacagccgtgggctttcgg
ctggacccccctgccagtggcctccccgctgccgtgttcttccccaccacggaccctggg
gagcggctgcagcagtgcagcaccaccatccagtccctcctcggtttgcctaaccctgca
cttcaggcactttgtaagctgatcactgcatcggaaactggagagcagctcatcaaccgg
gctgttaaaaatatggtgggaatgctgcatcaggtcctggttcagcttcaagcaggagag
aaggagcaggacttctccacggcgcccatccaggtgtccatcagcgtccagctctggcgg
ctcccaggctgccacgagttcctggcagctctagggtttgatctctgtgaagtcgggcag
gaggaagtgatactgaaaaccgggaagcaagcgaatcgcaggaccatgcactttgctctc
cagtccctgctggcactttttgattctactgagcttcccaaacgcctcagcctggacagc
tcctcctcgctggagtccctggcctctgcccagtcggtttccaacccagtgccccagtac
cagaaccctccgttctcgccaacgtgtccggacagcttggcttcagacgccatttccgtg
tacagcctgagctcgattgcttcctccatgagcttcgcgtccaagcctgagagcgtgtcg
gaaggggccggacacagaggacgccaggactacgaacggcccaagaacgtctatccccac
cggcccccggggccacggagccagctgtctccacagaccaaccccgcgggcagcaaggac
gatgaggagtatgaagggttctctatcatcagcaccgagcccctggctggctacccagat
gatgcaaaagcgagattttcacctgatcacaaacagtccaaagccggccagatgggagag
gcaaaggcctctgtcagcaccccaaactcgcccgtcaaaatgactcttatccccagccca
aactcgccgttccagaaagtggggaagctggccagctcggacacgggggagtccgaccag
tccagcaccgagactgacagcactgtcaagtcccaggaggacaacaaccagaagctcgac
cctcaggagctggcccagaagatcctggaggagacgcagagccacctcctggcagtggag
cgtctgcagaggagcggcagccaggcgagcaagagcagcagcccggccgacggtgccacg
acgcccaccagcacctccgccttccgatcctccgagaccagcgccttcagccggcctgtg
agctccggcaacaagagccagccctctcccgtgacaatgaaaccaaagcctccaaccagg
agctcgtccctgcagaaggtgagctctggctacaacagccccaccatgtcggagacgtcc
aacaaagacggcaccggccagtccagcgggcagccctctccgagtgctgacttgcacagc
tccctgatcgagcagcctcacttcaagctcaagtaccccagctctccatacagtgggcac
atctccaagtcccccaggaacatctccccaagctcaggccaccagtctcccgtgggcagc
acaccctccccggcgctctcgtactcctccgctggctccgctcgctccagccccgccgat
gcccccgacatagacaagctgaaaatggcagccatcgatgagaaggtacaggccatccac
aacctgaagatgttctggcagagctcgccccagcactctcctgggcccatgaagattttt
cgaggggctccgggaacaatgacttctaagaaagacgttctcagcttgctaaacttgtct
ccgcggcacagcaaggaggagagtgtggacaagctggagctgaaggatttgtctgttccc
cggcaccttgcgtccccgcaaaagaatccccccaacggacaccggcgccccgaggcgacc
cacgcaggggcttcctctcctcctccgcctcccagcagcactccgggaacggcacgcccg
ctgaggctgccgtcgggcaatggttacaaattcttgtcgccaggaaggttttttccttcc
tccaagtgttga
DBGET
integrated database retrieval system
