Gavialis gangeticus (Gharial): 109291176
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Entry
109291176 CDS
T07453
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04517
IgSF CAM signaling
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109291176 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109291176 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ggn04812
]
109291176 (SPTBN1)
Cytoskeleton proteins [BR:
ggn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109291176 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
109291176 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
SLATT_6
Motif
Other DBs
NCBI-GeneID:
109291176
NCBI-ProteinID:
XP_019363599
LinkDB
All DBs
Position
Unknown
AA seq
2167 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFSYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIIRLLSKHKAFEDEMSGRSGHFQQTVKEGEDMIAEEHFGSEKIKERIR
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILRIVSSNDVGHDEYSTQ
SLVRKHKDVAEEIANYRSVIDSLHEQAKALPQEHAESADVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNSMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMQLIAEKPETEAIVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLECQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSTDEVDGKRLIVEQKFLELLEPLTERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDSSPNAE
AIQQRLGDLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKVTDDADSQQQWDGTKGEQISQNGLPSDQESPRVSYRSQTYQNYKNFNSRWTAN
DRPRSGL
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcaacagactatgacaatattgaaatacaacagcagtacagtgat
gtcaacaaccggtgggatgtcgatgactgggacaatgagaatagctctgcgcgactcttt
gagcgatctcgtattaaggccttagcagatgaacgtgaggcagttcagaagaagactttc
acgaagtgggttaattcgcatttggcacgtgtatcatgcagaattacggatttatacact
gaccttcgcgatggacggatgcttatcaaactgctggaagttctttcaggagagagactt
cccaaaccaaccaagggaaggatgcgcatccattgtttggaaaatgttgataaggccctt
cagtttttgaaagaacaaagagtgcatctagaaaatatgggatcccatgatattgtggat
gggaatcacaggctgactcttggccttatttggaccattattctgagattccagatccag
gatatcagtgttgaaactgaagataacaaagagaagaagtctgctaaagatgctttgcta
ttgtggtgccagatgaagacagctggttatcccaatgtcaacattcacaacttcactact
agctggcgggatgggatggctttcaatgcactaatacataaacacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaatctg
gcagagcaacaccttggtcttactaagcttttggacccagaggatatcagtgttgaccat
cctgacgaaaagtcaattatcacctatgtggtgacatattaccactacttttctaagatg
aaagctttagccgttgaaggaaaacgtatcggaaaggtgcttgacaatgccatcgaaaca
gagaaaatgattgaaaaatatgaatcactggcttctgaccttcttgagtggattgaacaa
accattatcatcctgaataatcgcaaatttgctaactcactggttggggtgcaacagcag
ctgcaggcattcaacacctatcgcacagtggagaaaccacccaaatttacagaaaaagga
aacctagaagtgctacttttcaccatccaaagcaaaatgagagcaaacaatcagaaagtg
tacatgccaagggaaggcaaactcatctcggacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcataagacaagagaaactg
gaacaacttgcacgtagatttgatcgcaaggcagctatgagagaaacctggctgagtgaa
aatcaacgtttagtttctcaggataactttggttttgaccttccagcagtggaggctgca
actaaaaagcacgaggccattgaaacagacattgcagcatatgaagaacgagtccaagca
gtggttgctgttgcaagggagcttgagactgaaaattaccatgatatcaaacgcatcaca
gcaagaaaggacaatgttatccgtttgtgggagtacctgctggagctgctcagggcacgc
agacaaagactggagatgaaccttggtctgcaaaagatattccaggaaatgctttacatt
atggattggatggatgaaatgaaggtgctgctgctgtctcaggactatggcaagcatttg
ttaggggtagaagacctgttacagaaacatgccctagtggaggcagacattgccattcag
gctgagagagtgagaggggtcaatgcatctgctcagaaatttgccacagatggggaaggt
tacaaaccgtgtgacccacaagttatcagagaccgagtagctcatatggagtttagttac
caagaactatgccagttagcagctgaacgccgggctcgcctggaggaatccagacgtttg
tggaaattcttctgggaaatggctgaagaggagggctggatcagagaaaaggaacaaatc
ttgtcatctgatgactatgggaaggatctaacaagtatcatccgcctcttaagtaagcat
aaagcatttgaagatgaaatgagtggtcgtagtggccacttccaacagactgtaaaagaa
ggtgaagatatgattgctgaggaacactttgggtcagagaaaatcaaggaacgaatcagg
gacattcgggagcagtgggctaaccttgagcagctctctgccattaggaaaaagcgcctg
gaagaagcctctttgcttcaccagttccaagctgatgctgatgatatcgatgcctggatg
ttggacattcttaggattgtctccagcaatgatgtcggtcatgatgaatattccactcag
tctttggtcaggaaacacaaagatgttgccgaagagattgcaaactatagatctgtcatt
gactctcttcatgagcaggcgaaggctctgccacaagaacatgctgaatctgcagatgtg
cagggcaggttgtctggaatagaggaaagatacaaagaggtggctgaactgacccggctc
cgtaagcaagcgttacaagatacccttgctctgtataagatgttcagtgaagcggatgca
tgtgaactatggattgatgaaaaggagcagtggcttaacagtatgcagattccagagaag
ctagaagacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtggtaaatcagattgctagacagctgatgcacagtggtcat
ccaagtgagaaggagatcaaggcacagcaagataaactgaacacaaggtggagccagttc
cgagaactggtagacagaaagaaggatgctcttatctctgctctaagtatccagaactac
catctggaatgtaatgaaaccaaatcctggattagggaaaaaaccaaagtaattgaatcc
acacaagacctgggcaatgatctggctggcgtaatggcccttcagaggaagttgacgggt
atggaacgtgatttggtagctattgaggctaagctaagtgacctgcaaaaagaggcagaa
aagctggaatctgagcatcctgaccaggcccaggccatcctgtcgaggcttgcagaaatc
agtgatgtgtgggaagaaatgaaaaccaccctaaagaaccgtgaagagtcccttggagag
gcaagcaaactgcagcagttcttgcgtgacttggatgacttccagtcctggctgtccaga
acccagactgcgattgcctcagaagatatgccaaacacattggccgaggctgaaaagctc
ctcactcagcatgagaatattaagaatgagattaacaattatgaagaagactaccagaaa
atgagggacatgggtgagatggtaacacaagggcagactgatgcacagtatatgttctta
cgccaacgtctgcaggctttggacacaggatggaatgagcttcacaaaatgtgggagaat
aggcaaagtctcctctctcaatcccatgcctaccaactctttctcagagataccaagcaa
gcagaagcatttctcaataaccaggagtatgttttggcacatactgaaatgcccaccacc
ttggaaggagcagaagctgctattaaaaagcaggaggattttatgaccacgatggatgcc
aatgaggaaaagatcaacgcggttgtagaaactggcaggagactagttagcgatgggaac
attaactctgacaagatccaagagaaggtggactctatcgatgacagacataggaagaat
cgtgaagcagccagtgagcttctgatgagattgaaagacaacagggatcttcaaaagttt
cttcaggattgccaggagctgtcactttggatcaatgagaagatgcttacagcccaggat
atgtcttatgatgaagcaaggaacctacacagcaagtggctaaaacaccaggcattcatg
gcagaacttggatccaataaggaatggctggacaaaattgaaaaggaagggatgcagctc
attgcggagaagccagagactgaggccatagtgaaagaaaagctgacaggtctgcaccaa
atgtgggaggagctagaatccactactcagaccaaggctcagcgactctttgatgcgaat
aaagctgagctgttcacccagagttgtgctgatctggataaatggctgaatggcttagag
tgccaaatacaatctgatgactacggaaaggatcttaccagcgtcaacattctgttgaaa
aaacaacagatgcttgagaaccaaatggatgttcgtaagaaggagatagaagagctacaa
agccaggcgcaggctttgagccaggaggggaagagtactgatgaggttgatggtaaacgt
cttattgtagagcagaaatttttggaattactggaacctttaactgaaaggaaggcaaat
ctattggcctccaaagagatccaccagttcaacagggatgtagaagatgagattttgtgg
gttggcgagaggatgcctatagcaacatctactgatcatggacataacctccagactgtt
cagctactaataaagaaaaatcagacacttcagaaagaaatccaagggcatcagcctcgc
atcgatgacatttttgagaggagccagaatatccttacagacagcagccctaacgccgaa
gcgattcagcagcgacttggtgacttgcagcagctgtggaacctcctaattgaggagaca
gagaaacgccacaagcgcctggaggagtctcacagagcgcagcagtattactttgatgct
gctgaggctgaggcctggatgagtgagcaggagctgtatatgatgtcagaagagaaggcc
aaggatgaacagagtgcagtatccatgttgaagaagcaccagattttggaacaggctgta
gaagactatgctgagacagtgcatcagctttctaagaccagcagaactttggttgcagac
aatcatccagaaagcgagcgcatcagtatgcggcagtccaaggtggataagctgtatgca
ggcctgaaggatctagctgaagagaggaggggcaaactggacgagagacacaggctcttt
cagcttaaccgggaagtggatgacttggagcagtggattgctgagagggaggtggtggct
ggatcccatgagctgggacaggattatgaacatgtaacgatgctacaagagcgattccgt
gaatttgctcgagacactggaaacattggacaggagcgggttgatactgttaaccacatg
gccgatgagctcatcaattcaggacattctgatgctgccaccattgcagaatggaaagat
ggtctcaacgaggcatgggctgacctgttggagctcattgacacaagaacacagattcta
gctgcctcttatgaactgcataaattttaccatgatgccaaggagatcttaggacgtatc
caagataaacataagaagctacctgaagaacttggtagagaccaaaatacagtggaagca
ctacagagaatgcacacaacgtttgaacatgatatccaagctttgggcacccaggtgaga
caactgcaggaggatgctgcacgtcttcaggctgcctatgctggggacaaggctgatgac
atccagaagagggagaatgaagtcctagaagcctggaaagctctgctagatgcctgcgag
gggcgcagggttagactggtagatacaggggacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgttattcggcagattgaagcccaggagaagccaagg
gatgtctcatctgttgaattactaatgaacaatcaccagggtattaaagcagaaattgat
gcccgcaatgacagttttactacctgcattgaacttggcaaatctctcctggcaaggaaa
cactatgcatcagaagagatcaaggaaaagctactgcagttgacggagaaaaggaaagaa
atgattgacaaatgggaagacagatgggaatggctgagactcattttggaggtacatcag
ttttcaagggatgctagcgtggcagaggcctggctgctgggacaggagccatacctatcc
agccgtgagataggtcaaagtgtggatgaagtggaaaagttaattaagcggcatgaagca
tttgagaaatctgcagctacatgggatgaaaggtttgcagcactggaacgactgactacg
ttggagctactggaagtacgtcgacagcaagaggaagaggagagaaagaggcaacctcct
tctccagagccaagtccaaaggtcacagatgacgcagattcacaacagcaatgggatggc
acaaaaggagaacaaatttcccagaacggtttgccgtcagaccaggaatctccacgggtt
agttaccgctcccaaacctaccaaaactacaaaaactttaatagcagatggacagccaat
gaccggcctaggtctggactgtga
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integrated database retrieval system
