Gavialis gangeticus (Gharial): 109291192
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Entry
109291192 CDS
T07453
Symbol
FAM188B
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAM188B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109291192 (FAM188B)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109291192 (FAM188B)
Ubiquitin system [BR:
ggn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
109291192 (FAM188B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
TIMP
Motif
Other DBs
NCBI-GeneID:
109291192
NCBI-ProteinID:
XP_019363623
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MSDQVQITPVPFGIKMDNCFVEEVAASVVREFLSRKGLKKTMATMDQEFPRSALSINNRN
ELRNVLHIQSLYKENKAKENPLKTILEMMTNYFLGYFGSMTTISPNSVASLPPNKTSILS
TADYSEDMRGNTRSDASKTETYRCEIDDLLDKVIPSRRHHHKSEKSNTGISPNSSSFSEG
DKKFKNSMEDLKIIRNSEEMKTTMKEKQRPRSSLILRGMMAGPTASSQEDSLKRRPLNQR
SSSISSIIQFKGEHSHSSNLPNGDFQESKVTSVQSVGNLCPHNDSAMKADMELSSKTLSG
SYRISAAEEIRNIREDTDDLFARLLSERERSRVGERKLMPSFDTETGEKTLKLNTFHRYS
GSGREKRERSLKKNESPLPGPRKAPTSISNKGDLMKDALELVDVEDEAAVGEVSKIPDHS
TLCTLQVDSKAMDISLAKEIKNLLFGSSLCCFSEEWKIQSFTFNNTPQLKYGIVQKKGGP
CGVLAAVQACVLQKLIFGDSGRNSEAGCLQPSEVHRTKCLTVAIADILWRAGDHEKAVIA
LPSGRQQFTPVGKYKADGILETLMLHNITKYEDLTIFLQKYIHQFETGPCGCILLTLSVI
LSRSIHLVRSDFDVLTNQLIGSHGYCTQELVNLLLTGKAVSNVFNNVIELDSGNGNITIL
KGITGRSDIGLLSLFEHYDVCQVGCYLKTPKYPIWLVCSESHFSVLFCLQNDLLGDWKTE
RRFDLYYYDGLANQEEEIRLTVDTTQNYTEDKENDLIPPLEHCIRTKWKGAVIDWNGTEP
IL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaagtacagatcacccccgtgcctttcgggataaaaatggataactgcttt
gtggaggaggtcgctgcatctgtggtgagagaatttctcagtagaaagggtttaaaaaag
accatggccaccatggaccaggaatttccacgctctgctcttagcatcaacaacaggaat
gaactcagaaatgttctccatatacaatctctgtacaaagaaaacaaggccaaggagaac
ccactgaaaacaattctagaaatgatgacaaactatttccttggatattttggaagcatg
actaccatcagtccaaattctgtggcatcactacctccgaataaaacctccatactcagt
acagcagactactccgaagacatgcgtgggaatacaaggtccgacgcaagtaaaactgaa
acctacagatgtgagattgatgacctgcttgataaagtcattccatccaggagacatcat
cataaaagtgagaaatccaacactgggataagtccaaatagtagctcattctccgaaggg
gataaaaagtttaaaaacagcatggaggatttaaaaataataagaaattcagaggagatg
aagaccacaatgaaagagaaacaaaggcctaggtctagtcttatcctcagaggaatgatg
gctggaccaacagcgagttcacaagaggactcgctaaaaaggaggcctctgaaccaacga
tcttctagcataagtagcataatacaattcaaaggagaacacagtcattcttcaaatctg
ccaaatggcgattttcaggagagcaaagtgacttctgtccagtccgtaggtaacctctgt
ccacacaatgacagtgccatgaaagcagacatggagctttcatccaagactttgtcaggc
tcgtacaggatttcagccgccgaggaaatcagaaatatccgtgaagacacagacgacctg
tttgccaggctgctgtcagaaagagagagaagccgagttggagagaggaaattgatgcca
agctttgatacagagacgggtgaaaaaaccctcaaattaaatacgtttcacagatattct
ggatctggaagggagaaaagagaaaggtctctcaagaagaatgaaagtccattaccaggc
cccagaaaggcgccaacatccatttccaataaaggcgacctgatgaaagatgccttagaa
ctagttgatgtcgaggatgaagcagcagttggggaagttagcaagatcccagaccattcg
acactctgcacgcttcaagtagattcaaaggcaatggatatttcccttgcaaaagaaata
aaaaatcttttgtttggctcaagcctttgttgcttcagtgaagaatggaaaatacagagt
tttacatttaataatacacctcagttgaaatatggcattgtgcaaaaaaagggtggcccg
tgtggagtactggctgctgttcaagcctgtgtcctgcaaaagcttatctttggagacagc
ggcaggaatagcgaagctgggtgtctccagccttcagaagtgcataggaccaaatgcctc
actgtggcaatagcagatattttatggcgagcaggggaccacgaaaaagcagtgattgca
ctgccttcaggaaggcagcagtttactccggtaggaaaatacaaagcagatgggatctta
gaaacgctaatgctacataacatcacaaaatatgaggatctgacaatatttcttcagaag
tatattcatcagtttgaaactggtccgtgtggatgcattcttctcactctgtcagtgatc
ttatcaagatctattcatctggtgcgcagtgactttgatgtgctcacaaaccaattgata
ggtagccacggatactgcacacaggaacttgtgaacttgcttctgactggcaaagctgtg
tccaatgtgttcaacaatgtgatagagctggactctggaaatggcaacatcactatatta
aaaggcatcactggacgcagtgatatcggcttgctgtctctctttgagcactatgatgtt
tgccaggtcggctgctacttgaagacccctaagtatccgatttggttggtatgcagcgaa
agccacttcagcgtgctgttttgcttgcaaaacgacttactgggtgactggaaaacagaa
cggcggtttgatctatattactacgatggcttggccaatcaagaagaagaaatacggcta
actgttgatacaactcagaattatactgaagataaagaaaatgatcttattcctcccctt
gagcactgtattaggacaaagtggaagggagccgttatcgactggaacggcactgagccc
atcttatga
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