Gavialis gangeticus (Gharial): 109291212
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Entry
109291212 CDS
T07453
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109291212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109291212
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109291212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
109291212
NCBI-ProteinID:
XP_019363645
LinkDB
All DBs
Position
Unknown
AA seq
2031 aa
AA seq
DB search
MADFLLPPGTNSFHRFTPESLAAIEKRIEEKHTRTTKQENKEQVGEEEKPRPQVDLQACK
KLPELYGNPPPELIGEPLEDLDSYYSDHKTFIVLNKGKTIFRFSATPAMYILSPFHPIRR
AAIKILIFTLFSMFIMCTILTNCVFMAQSETPSWNKYVEYTFTGIYTFESLIKILARGFC
MTEFTFLRDPWNWLDFSVIVMAYVGEFVNVGSVAPLRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRHKCIRNYTELNSTNGTFYLDGKTWY
SVDEFLNDQENYFIKNGTTDVLLCGKSSDAGTCPQGYGCYKAGENPDHGYTSFDTFGWAF
LSLFRLMTQDYWERLYQQTLRSAGKIYMLFFMLVIFLGSFYLVNLILAVVAMAYEEQNQA
TIAETEEKERKFREAMEMLKKEQEALAAKGIDSLSLSSLEMSPLASKNAKERRNRRKKKK
STGAEDCGEDQKVPKPEYDGSQRRMTLLGISYGPSTNLLKRKASHGSVFSFRLRGRDTGS
ETDFADDEISTAGETESHRGSFLVPRLGRCPSMQSQASHMSYPATPSYTHTGKRNSSVDC
NGVVSLVEGGTGAHNPDPASPTGLLLPSVVMEKPGTGDTTSPSEEASRKQLLVPHHLAVD
HSDIPFQRQRAVSAVSIITSALEELEESQQKCPPCWNHFALKFLIWDCSPVWLLIKKYVK
FVVMDPFTDLTITLCIVLNTLFMALEHHKMTKEFENMLNIGNQVFTGIFTAEMIFKIIAL
DPYYYFQQGWNIFDSIIVSLSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYLDHVSKISSNGRLPRWHMNDFFHSFL
IIFRILCGEWIETMWDCMEVAGQPLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLSA
PDEDGELNNLQIAFARINRGLQYVKRTIWNFCCNVLRHPKTTAEKKAMMKLAAQNTGAHN
NCMNSHTAAEPGKDVENHRENHTDDVTNRNGQRPVTSDNDDFMTNPDLSICVPIAVGESD
IEDQDEDEEQSTFTEMEQEKQLQPRGQCCKSPGDQSQTSEICEELSELQMDKQVKAEPSS
PVGKTELDQISLSEGSTVDLTNPAELLEQIPEFAEELMEPEDCFPEACIQLFPCCTADVT
KFPGKIWWRLRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKNIKIMLEYADK
MFTYIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRT
LRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCI
NKTEGDMPLDYTIINNMTDCAESNTTGTYFWTKVKVNFDNVGAGYLALLQVATFKGWMEI
MYAAVDSRGSEEQPAWESSLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKISGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPVNKYQGFIFDIVTKQAFDVTIMILICLNMIT
MMVETDDQSHEKVHILHIINMLFVAIFTGECMIKMVALRHYYFTNGWNIFDFVVVILSIV
GTVLSDIIQKYFFSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMANFAYVKMEHGIDDMFNFQTFGNSMLCLFQITTSAGWDGLLNPILNTG
PPYCDPNILNANGSKGDCGTPAIGILFFVTYIIISFLIVVNMYIAIILENFSVATEESTE
PLSEDDFDMFYEIWEKFDPEATQFIEYSALSDFADALSEPLRIPKPNKIKLIAMDLPMVS
GDRIHCLDILFAFTKKVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKQEEVS
AVVIQRAYRRHLFLRSLKQASYLYRHRTCDGNIIEEGAPEKEGLIAFMMNENYGRPIDKS
NSVSSTSFPPSYDSVTRATSDNLQLKMTDSSKSEEAIDCLLSPDRDKESIV
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcttgttaccaccgggtactaacagcttccaccggttcacgcctgaatcc
ttggctgctattgagaagcgcattgaggagaagcacacaaggaccaccaagcaggagaac
aaggaacaggtgggagaggaagaaaagcctcgacctcaagttgacttacaggcttgcaaa
aagctgcctgaactctatgggaatcctcccccagagctcattggggaaccactggaggat
ctcgactcttactacagcgatcacaagacatttatagtactgaacaaagggaagacaatc
tttcgatttagtgccactcctgccatgtatatacttagccctttccatcccatcagaaga
gcagcaattaaaattttgatctttacattgttcagtatgtttattatgtgcactatttta
accaattgtgtgttcatggcacaatcagagactccgtcttggaataaatatgttgagtat
actttcactggcatttacacttttgaatcactgataaaaatattggcgagaggattttgt
atgacagaattcaccttccttagagatccatggaactggctggatttcagtgttattgtt
atggcgtatgtaggagaatttgtgaatgtaggcagtgttgcacctcttcggactttcagg
gtattgagagctttaaaaactatttcagtaattccaggattgaagaccattgtaggtgca
cttatccagtctgttaagaaacttgccgatgtgatgatcctgaccgttttctgcttgagt
gtctttgccctcataggcttgcagctctttatgggaaatttaagacataagtgcatcagg
aactacactgagctgaactccaccaatggtacattttatttggatggcaagacgtggtac
tccgtggatgagtttctaaatgatcaagaaaactacttcataaagaacggcactacagat
gtattactgtgtggcaaaagctcagatgctggcacgtgtccacagggctatggctgctac
aaggctggtgaaaatcctgatcatggctacacaagctttgatacttttggctgggcattt
ctctctctcttccgcctgatgacacaggattactgggagcgtctctatcaacagaccctg
agatctgctgggaagatctacatgctcttttttatgctggtcatcttcctgggctcattt
tatctggtcaacttgatcctggctgtagtagccatggcttatgaagaacagaaccaagct
actattgctgaaacagaggaaaaggaaaggaagtttcgggaagccatggaaatgctaaag
aaagagcaagaggcgctggctgctaagggaatcgactccttgtcacttagctctttggaa
atgtcacctttagcatctaaaaatgccaaagaaagaagaaataggagaaagaaaaagaag
tcaacgggggcagaagattgtggagaagaccaaaaggttcccaaacctgagtacgatggc
agtcagagaagaatgactctccttggcattagttatggtcccagtacaaatttgctgaag
cgcaaagccagccatggaagcgtattcagtttccgactccgaggcagagacaccggctct
gaaacagattttgccgacgacgagatcagtactgctggggaaaccgaaagccaccgtggc
tcattcttagttcctaggctggggagatgcccaagcatgcagagtcaagcaagccacatg
tcttacccagctacgcccagctacacacacactggcaagagaaacagctcagtggactgc
aacggcgtggtttccttggtggaaggaggcaccggggcacataacccagacccagcctct
ccaacggggttactgctgccttcagttgttatggaaaaacctgggacaggtgacacgact
tctccctcggaggaagcaagcaggaagcagctcttagtgccccatcaccttgcagtggac
cattctgatataccatttcaaagacaaagagcagtgagcgccgtcagcatcattaccagt
gccctagaagagcttgaggaatcacaacagaaatgtcctccatgctggaatcattttgcc
cttaaatttctcatttgggattgctctcctgtgtggctgctaatcaagaaatacgtaaag
tttgtagtaatggacccatttacagacctgactatcaccctttgcattgtgttgaatact
ctcttcatggctctggagcatcataagatgacaaaagaatttgaaaacatgctcaacata
ggcaatcaggtcttcactggaatttttacagcagaaatgatcttcaaaatcatcgctcta
gacccgtactactattttcagcagggctggaatatttttgacagtatcattgtttcctta
agcctgatggaactgggtttatccagcatgggaaatctgtccgttttacgttctttccga
ctgctgagggtcttcaaattggcaaagtcctggccaaccttaaatacgctcattaaaatc
attggtaactcagtgggtgccctggggaacctgaccctggttctggccatcatagtcttt
atttttgcggtggtaggaatgcagctttttgggaaaaactacttggatcacgtcagcaag
ataagctccaatggccgtttgccacgttggcacatgaacgatttcttccattctttcctc
attatattccgaattctctgtggagaatggattgagaccatgtgggactgtatggaagta
gctggacaaccattgtgccttctcgtcttcttgctggtcatggtgataggaaacctagtg
gtgctcaatctgttccttgcattgctgctgagctctttcagcgctgacaacctttcagca
ccagatgaagatggagagctgaacaatctgcaaattgcttttgctcggatcaacagggga
ctccagtacgtgaaacgcacaatctggaatttctgctgtaatgtactcaggcatcctaag
acaacagcagaaaagaaggccatgatgaaacttgctgcccagaatacaggtgcccacaac
aactgtatgaatagccataccgcagcagagcctggtaaagatgtggaaaatcacagagag
aaccacactgatgatgtgactaacagaaatgggcagcgccccgtgacaagtgacaacgat
gattttatgaccaaccctgatctttccatctgtgtccctattgctgtcggagagtcagat
atcgaagatcaagatgaggatgaggagcagagcacgttcacagaaatggaacaggaaaaa
cagctgcaaccgagggggcagtgctgcaaaagcccaggagaccagagtcagacctctgag
atttgtgaagagttaagtgagttgcagatggataaacaggtgaaagctgaaccatcatca
ccagtagggaaaacagagcttgatcaaatcagtctctctgaaggcagcacggtggatttg
acaaatcctgcagaactgctggaacagatcccagagtttgccgaagagctaatggaacct
gaggactgttttccagaagcctgcatccaacttttcccatgctgtacagcggacgtcaca
aaatttccaggcaaaatttggtggcggctgaggaaaacctgctacaggatagttgagcac
agctggttcgaaacattcatcatcttcatgatcctgctgagcagtggagctctggcattt
gaagatatctaccttgaagaacgaaaaaacattaaaatcatgttggaatatgctgacaaa
atgttcacctacatctttgtcctggagatgcttttgaaatgggtggcttatggcttcaaa
aagtatttcaccaatgcctggtgttggcttgatttcctcatcgtagatgtctctttaata
agcctcatagctaatacacttggatactccgaaatgggtcccattaaatcccttaggacc
ctccgggctctgagaccattaagagcattgtcacgatttgaagggatgagggtggttgtg
aatgccctggtgggtgccatcccttccatcatgaatgtgctgctcgtctgccttatattt
tggctcatttttagcatcatgggagtgaacctatttgcagggaagtttggaaaatgcatt
aacaagactgagggggatatgccgttagattacacaattattaacaacatgaccgactgc
gcagagtctaatacaactggcacttatttctggacaaaagttaaagtcaactttgataac
gttggtgctggttacctggctcttctacaggtggcaacatttaaaggttggatggaaatt
atgtatgcagcagttgattcacgagggagtgaggagcagcccgcatgggaaagtagttta
tacatgtacctctactttgtgattttcatcatctttgggtctttcttcacattgaacctc
ttcataggtgtcattattgacaatttcaaccaacaaaagaaaaagataagtgggcaagac
atctttatgacagaagaacagaaaaagtattacaatgcaatgaaaaaattgggatccaaa
aaaccacaaaaacccatccccaggccagtgaacaaataccaaggttttattttcgacata
gtcacaaagcaagcctttgatgtcaccatcatgattctcatctgccttaacatgatcacc
atgatggtagaaacagatgaccaaagtcatgaaaaagtccacatccttcatataatcaac
atgctctttgttgctatcttcactggagagtgcatgattaaaatggtggctttaagacac
tactacttcaccaacggctggaatatctttgactttgttgttgtgattctatccattgtg
ggcactgtcctttctgacatcattcaaaaatattttttctctcctacactcttcagagtc
attcgcttggctcggattggccgggtcctaagacttatacggggagccaaaggaattaga
actctcctttttgccttaatgatgtcacttcctgctctgttcaacattggtctcctgctt
tttctagtcatgtttatttatgccatttttggcatggctaactttgcctacgttaagatg
gagcatgggattgatgacatgttcaacttccaaacctttggtaacagcatgctctgtctc
ttccaaatcacaacatcagctggctgggatgggcttctcaatcctattttaaacactgga
ccaccatattgtgatccaaacatcttaaatgcaaatggttcaaaaggagattgtggaacc
cctgctatagggattttattctttgttacgtatatcattatatcgtttctcattgttgta
aacatgtatatagccattattttagagaacttcagtgtggccactgaggaaagcacagag
cctctaagcgaggatgactttgatatgttttatgaaatctgggagaagtttgatcctgaa
gcaactcagtttattgagtattctgcactttcagactttgcagatgcactgtcagaacct
ttacgcataccaaaaccaaacaaaattaagctcatagcaatggaccttcccatggtcagt
ggagacaggatccactgcttggatattttgtttgcttttaccaaaaaggtgctaggagaa
tctggagagatggatgcccttaaaatacagatggaggaaaagtttatggctgccaaccct
tctaagatttcctatgaaccaatcacaaccacgctgaggcggaaacaagaggaggtttct
gccgttgttatccagcgggcgtatcgaaggcatttgtttctacgttctctgaaacaggct
tcatacttataccgtcacagaacttgtgatggcaacatcattgaagaaggtgcccccgag
aaggaaggtcttattgcctttatgatgaatgaaaattatggtaggcccatagacaaatca
aactctgtttcctcaacatctttccctccatcctatgacagtgtcacaagagccaccagt
gacaacctccagctaaaaatgacagactctagcaagagtgaggaagctatagattgtctg
ttatctccggacagagataaagaatccattgtttaa
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