Gavialis gangeticus (Gharial): 109291365
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Entry
109291365 CDS
T07453
Symbol
FAM188A
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase FAM188A isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109291365 (FAM188A)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109291365 (FAM188A)
Ubiquitin system [BR:
ggn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
109291365 (FAM188A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
109291365
NCBI-ProteinID:
XP_019363894
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MAELSAELVHLVWGKSAGPRGLADTIFCRWAQGFVFSESESTALEQFEGGPCAVIAPVQA
FLLKRLFASEKSTWRECQEEEQKNLLSHTLCDILEMVCSDNSESYSLATWIRGKTTEETA
SISESPAESSHQEEQPSALAVEELGFERFHALIHKQAFRSFPELKDAVWDQYSMWTNRFG
VLLFLYSVILTKGIENIKNEIEDSTEPLIDPVYGHGSQSLINLLLTGHAVSNVWDGDREC
SGMKLLGIHKQATVGFLTVMESLRYCKVGSYLKSPKFPIWILGSETHLTVFFAKDMALVA
PEAPSEQARRVFQTYDPEDNGFISDTLLEDVMKALDLVSDPEYVNIMKTKLDPEGLGIIL
LGPFLQEFFPEQDSRVPESFTVYHYNGLKQSNYNEKVMYVEGTAVVMGFEEPMLQTDDTP
VKRCLQTKWPYIELLWTTDRSPSLN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctgagcgcggagcttgtgcacctggtgtggggcaagagcgcggggccccgc
ggcctcgccgacaccatcttctgccgctgggcgcaagggtttgtatttagtgaatctgaa
tcaacagcattagaacaatttgaaggtggcccttgtgcagtgattgcaccagttcaggca
ttccttttgaagagactttttgctagtgagaagtctacttggagagagtgtcaagaagaa
gaacagaagaacctcctctcacatacattatgcgacattttggaaatggtttgctctgat
aattcagaatcatactctttggcaacatggataagaggcaaaacaaccgaagaaactgct
agtatttctgagagtcctgcagagtcaagtcatcaagaggaacaaccttctgccttggct
gtcgaagagcttggctttgagcgatttcatgcattaattcacaagcaagcgttcagaagc
tttccagaactcaaggatgcagtttgggatcagtattcaatgtggacaaacagatttgga
gtattgctgtttctgtattctgtgatattgaccaagggtattgaaaacataaaaaatgaa
attgaagactcaacagagccattaatagatcctgtttatggccatggaagccaaagctta
attaatctcttgctgacgggacatgctgtgtctaatgtgtgggatggagacagagagtgc
tcaggaatgaaacttcttggcatacataaacaggcaactgtaggctttttgaccgtaatg
gaatctctgagatattgtaaggttggctcctacttgaaatctccaaagttccctatttgg
atacttggcagtgaaacacacctcacagtcttttttgccaaggatatggcccttgttgcg
cctgaggctccttcagaacaagccagaagagtttttcaaacatatgatcctgaagataat
ggatttatatctgacacacttctagaggatgtaatgaaggctttagatcttgtatcagat
cctgagtatgtaaacattatgaagaccaagttagacccagaaggactaggaattatatta
ttgggtccctttctgcaagaatttttccctgagcaggactccagggttccagagtcattc
actgtttatcactacaatggattgaagcagtctaattataatgaaaaggtcatgtatgta
gaaggaacagcagttgttatgggctttgaagagccgatgctacagactgacgacactcca
gtgaaacgctgtttgcaaaccaagtggccatatatagagttactgtggactacagatcga
tctccttcattaaactga
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integrated database retrieval system
