Gavialis gangeticus (Gharial): 109291402
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Entry
109291402 CDS
T07453
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109291402 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109291402 (PEX1)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
109291402 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_22
RNA_helicase
NACHT
AAA_18
ABC_tran
TIP49
AAA_33
Sigma54_activat
AAA_7
IstB_IS21
AAA_25
AAA_28
AAA_29
AAA_2
AAA_24
nSTAND_NTPase5
Bac_DnaA
Mg_chelatase
ATPase_2
Parvo_NS1
NTPase_1
APS_kinase
PhoH
Molydop_binding
Hpr_kinase_C
DUF87
DUF1248
Motif
Other DBs
NCBI-GeneID:
109291402
NCBI-ProteinID:
XP_019363962
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MWGSGGPSGAAVTVAVCGSRDCFLHLPAALVARLRLQQGQAVKVSWGPQPVFLSWMEIRH
RSYHDGNIAEINRQLAEKLGITHGDQVFLEPCSQVLSCQQVEVEPLSADDWEILELHASS
LERHLLDQIRIVFPKAVFPVWVEQHTHIYIQISTLKPAAPYGRLEPHTKLLVCSKMRQDE
ENITNLSSSGSDILPELFIKSKMDQREKITEPLAKQSSLNPGVLEQCTSDTKVASIWGLI
RNIFSPTLEHKQDTSSGTFEISTLKEKLLNLIHMDAIFRVCQSQPPSQQNTSAFQKHNAV
HVFPWNLEYIELEPNFKVSYGTITALLSPRQRCQEAKQNLPVEKQKQMTSPQDRNPPGSS
NSQESNEISVVSIIWTGFEDLKDPIKYNSNVEAMHVGRVWIPDGLRKKLHIEMHASVRIK
SLESFPKIPASLRLQPTQNLHKDIHEDDIKSAFNSWLQDYTGDNFPWMITGSDCIQLGVK
ERMENFVLSVLQPSVTEENKSENIFMLSPSLLQKTNIQVLLCPVTTKAADDRTHCMHDTD
KILRLHKLCSLGGVDKLGTSSFEHISHSLLGRPLSQKLACFVVGLRSGGVLLTGAKGTGK
STLAKAICKEAFDRLDAHVEVIDCKDLRGRRLENIRKKVEEAFLEAAWRQPSILLMDDLD
HIVGVSSAPEHENSPEAVQSNRLAHVLKDVIKEVISMGSLIALIATSQSEHSLHPSLVSA
QGIHVFQCFKHIQPPNQEQRCQMLCSIIENKLSCAINKFCDLDLQYIAKETEGFVARDFT
LLVDRAIHACVSNRRACKKEELNLSTSHFQKALKGFTASSLRNVNLHKPKDMGWDRIGGL
KDVRQILMDTIQLPAKYPELFAKLPIRQRTGVLLYGPPGTGKTLLAHVVARESRMNFISI
KGPELLSKYIGASEQAVRELFIRAQAAKPCIVFFDEFDSIAPRRGHDNTGVTDRVVNQLL
TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCIYCPPPDQTSRYEILKALSHSLP
LANDVDLQYLAGKTEYFTGADLEALLYNAQLEAVHSSLGSSLPQDFGSSSDSDFSLSSMV
FLNHSSGSEDSTGEGEGGLEHSLISLEMSELLPEDSGRSNMYRLYFGSSYESELGNGTPS
ELSSLCLSGPNSATHDLSGMSLRDVVSSQPSVLRTASQEGYQELNQEQMEHLRTEINAIK
ANHQSKNGEDITPSQSVQNKGILIITQSQLMTALAGTRPSISQDDRKKFLEIYDNFQNPK
KRKGQSAATFRPGQKVTLA
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggcggccccagcggcgcagcagtgactgtcgccgtgtgtggcagccgg
gactgcttcctgcacctgcccgcggcgctggtcgcccgcctccgcctgcagcagggccaa
gctgtgaaagtctcctggggtccccagcccgtatttttgagttggatggaaatcagacat
cgaagttaccatgatggaaatattgctgaaattaacagacagctagcagagaaacttggt
attacacatggggatcaggtattccttgaaccctgttcccaagtcctgtcctgtcagcaa
gtagaagtggagcccctctctgcagatgattgggaaatactggagctgcatgcttcctct
cttgaaaggcatcttcttgaccagattcggatagtatttccaaaagctgtctttccggtg
tgggttgagcaacacacccatatttacatccaaatcagtacactaaagccagctgctccc
tatgggagattagaacctcacacaaagctgcttgtatgttcaaaaatgcgccaagatgaa
gaaaacatcaccaatttgtcttcgtcaggaagtgacattttaccagaactatttatcaaa
agtaaaatggaccaacgagaaaaaataacggaacctcttgccaaacaatctagtttaaat
ccaggagtccttgaacagtgtacatctgatacaaaagtggcaagtatatggggtttaata
agaaacattttctctccgactttggaacacaagcaagacacttcctctggtacttttgag
ataagcaccttgaaagaaaagctattgaacttaatccatatggatgccattttcagagta
tgtcagtcccagcctcccagccaacagaacacatcagcatttcaaaaacacaatgctgtt
catgtttttccatggaatctagagtatattgagttagagcctaattttaaagtatcttat
gggacgattactgcacttctctcccccagacaaaggtgtcaagaagcaaagcagaatctg
ccagtggagaagcaaaagcagatgaccagcccacaagacagaaacccacctggttctagt
aacagtcaagaatccaatgagatttctgttgtttcgataatatggactggttttgaagac
ctaaaggatcccataaaatataacagcaatgtggaagccatgcatgttggaagagtttgg
attccagatggcctgagaaagaaactgcacatagaaatgcacgcgtctgtcagaattaag
tcactggagtcattccctaaaattccagcatctcttagattgcagcccacgcagaaccta
cataaagatatacatgaagatgacataaaatcagcttttaactcctggttgcaggattac
actggtgacaattttccctggatgataacaggttcagactgcatacagctaggagttaaa
gaaagaatggagaattttgtccttagtgtacttcagccttctgtcactgaagaaaataaa
tcagaaaatatttttatgttgagtcccagtttgctgcagaagacaaatatacaagttctg
ttatgtcctgtgactacaaaagctgccgatgacaggacccactgtatgcatgatacagac
aagatccttcgtttgcacaaactatgcagtttaggaggggtggataaattaggaacatcc
tcctttgagcatatcagtcacagccttttaggacgtcctttgtctcagaagctagcttgc
tttgttgtgggattgcgcagtggaggtgtcctgctcacaggagcaaagggaactggaaag
tcaacattagcgaaggccatctgcaaagaagcatttgatagactggatgctcatgtggaa
gtgattgactgtaaagatttaagaggaagaagattagaaaatatacggaaaaaagtggag
gaagcttttttagaggcagcatggcggcagccatccattcttttaatggatgatcttgat
cacattgttggtgtttcttctgctccagaacatgagaacagccctgaagcagttcagagc
aatagacttgcacatgttttgaaagatgtgataaaagaagtcatttcaatgggcagtttg
attgcattaattgccacaagccagtcagaacattccctgcatccttctcttgtttctgct
caaggaattcacgtgtttcagtgctttaaacatatccagcctccaaatcaggagcagaga
tgtcaaatgttgtgttccataatagaaaataaactgagctgcgctataaacaagttctgt
gatcttgatctgcagtatattgcaaaggaaacagaaggatttgtagctagagattttaca
ttgcttgtggatcgtgccatacatgcatgtgtttctaacaggagagcatgcaaaaaagaa
gaacttaatctgtcaacttcacactttcaaaaagctttaaaaggttttacagcatcatct
ctgagaaatgttaacttacacaaacctaaagatatgggttgggacaggattggtggctta
aaggatgtccggcaaatactcatggatactatccagttaccagcaaagtatccagaactc
tttgcaaaactgcccatacgacagagaacaggagttttgttatatggacctcctggaaca
ggaaaaaccctcttagctcacgtagttgcccgagagagtagaatgaattttatcagcatc
aagggaccagagctacttagcaaatatattggagcaagtgaacaagcagttcgagaactc
tttatcagggcacaggcagctaagccttgcattgttttctttgatgagtttgattctatt
gctcctcgccgaggtcatgataatactggagtaacagaccgggttgttaaccagctgttg
actcagctagatggagtggaaggcttacaaggggtttatgtgttggctgctactagtcgc
cctgatttgattgaccctgctctgttaagaccaggtagactggataaatgcatatactgt
ccacctcctgatcagacttctcgttatgaaatcttaaaggccctcagtcattctctgcct
ttggcaaatgatgtggacttacaatatttggcaggaaaaacagagtatttcacaggagca
gacttggaagctttattatacaatgctcaattagaggcagtacattctagcttgggttca
agcttaccacaagattttggttccagttctgacagtgacttcagtctctcttctatggtt
ttcttaaaccacagcagtggttcagaagattcaacaggggagggagaaggagggctagag
cattctctcatttccttggagatgtccgagttgcttcctgaagactcaggaagatccaac
atgtatcgtctttattttggtagttcctatgaatcagagctgggaaatggaactccttca
gaactgagctctctgtgtttgtctggaccaaattccgcaacccatgatttaagtggcatg
agtctgagagatgtagtatcatcacaaccctcagtgctgagaacagcttcacaagaaggt
taccaggaacttaatcaagagcaaatggaacacctccggactgaaatcaatgctatcaag
gccaaccaccagagcaaaaatggagaggatattacccccagtcagtcagtgcaaaacaag
ggtattttaatcattactcaatcccaactgatgactgcacttgcaggcacaagaccatca
attagtcaagatgatcggaaaaaatttcttgaaatctatgataattttcaaaatcccaag
aagaggaaaggacagagtgcagcaacattcagaccaggacaaaaagtgactctagcataa
DBGET
integrated database retrieval system
