Gavialis gangeticus (Gharial): 109291519
Help
Entry
109291519 CDS
T07453
Symbol
ABCB5
Name
(RefSeq) ATP-binding cassette sub-family B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109291519 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggn02000
]
109291519 (ABCB5)
Transporters [BR:
ggn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109291519 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
Rad17
AAA
AAA_15
AAA_30
AAA_14
DUF87
AAA_5
AAA_7
DUF2207_C
DUF815
MeaB
YebG
Motif
Other DBs
NCBI-GeneID:
109291519
NCBI-ProteinID:
XP_019364084
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MMEDIDIKIVGDTEQNSANNVDLDDQPPNKKEKKNKNPETIGPITIFRYADSLDITLMIL
GAVAAVINGTCLPLLSLVFGEMSDSFVNNCRSYENVSSSSHCNQTQMPSEEQITVFSLYY
VGIGVAALLFSYLQISFWVLAATRQTKKIRRMFFHAVLRQEISWFDITTSGELNTRLIED
INKINDGIGDKIAQLIQNMTTFIVGIVIGFVIGWKLTLVILSTSPLVVLSAAFCSKMIIT
LTSKELTAYSKAGAIAEEVLSSVRTVVAFGGQEKEIKRYTSRLGEAKNIGIKKAIASKLS
LGFVYLIINGCYGLAFWYGTTLILEDNSEYTIGSVLAVFFCVTYSSYCIGLASPHFETFA
IARGAAFKVFKIIDENPSIDSFSSDGHKLSHIKGTLEFDNVRFSYPSRPDIQILKGLSLK
IGAGQTVALVGSSGCGKSTTVQLLQRFYDPQEGVIKIDGHDIRSLNLRHFRECIGVVSQE
PVLFGTTIRNNIRYGREDVTDQEIEKATKEANAYDFIMDLPEKFNTLVGERGAQMSGGQK
QRIAIARALVRNPKILLLDEATSALDTESEAVVQAALEKASRGRTTIVIAHRLSTIQTAD
VIMTIVDGTVAEKGTHAELMEKKGLYYSLATAQSIKKAEHSEESAETVLKNHEESPPSNS
LISEKARIKHIPQKMSEEEVKPEEEHLPQVSLLKLFKLNKSEWPLIALGTLAAIINGACS
PLFAVIFGKIVTIFEIKNISTSYKVQIQHEANILSILFAGIGVVCFLTYFLQGFLYGRSG
EILTMRLRHMAFKAMLRQDIFWFDDKKNSTGALTTRLATEAAQVQMAVGSRLGVIAQNIS
TMGLSIIISFIYGWEMTLLILVIAPVLTVTGMLEVSALTGFANRDKKEMQRAGKLVHGFY
TNVVCCRNAQKKAQIYSSCYAFSQAFLYFTYAAGFRFGAYLITAGRMTPEGIFVVFTAIA
YGAVAVGETLTFVPDYAKARSGAAHLFALFERTPAIDSYSEAGDKPDTFSGRLEFREVSF
IYPTRPDVPILQDLSLTIERGQTVAFVGSSGCGKSTSVQLLQRFYDPLKGQVLFDSTDAK
HLNVQWLRSQIGIVSQEPVLFDCSIAENIAYGDNNRTVPMDEIIAAAKAANIHTFIEELP
EKYNTRVGDKGTQLSGGQKQRIAIARALIRQPKMLLLDEATSALDNESEKVVQQALDQAR
KGRTCIVIAHRLSTIQNADIIVVINNGKIIEAGTHHQLMAKQKAYFNLVNAQMFL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatattgatataaaaatcgttggagacacagaacaaaattcagctaataat
gtggacttggatgaccagccacccaacaaaaaggaaaagaaaaacaaaaatccagaaacc
attggtccaatcacaattttccgttatgcagatagtctggacataactcttatgatactg
ggagcagtagcagcagtaatcaatggaacttgtcttcctctactgtcactggtttttggt
gaaatgagtgatagctttgtgaataattgtcgatcctacgaaaatgtttcaagttcatca
cactgcaatcagactcagatgccctctgaagagcaaataacagtgttttctttatattat
gttggtattggagtagccgctctgctgttcagctacctacagatttcattctgggtttta
gctgcaaccaggcagacaaaaaaaataagaagaatgttcttccatgcagttctgagacag
gaaatcagctggtttgacatcaccaccagtggagaacttaacacacgcttgattgaagac
atcaataaaatcaatgatggcattggagacaagatcgctcagctgattcagaacatgaca
acttttatagtaggcatagtgattggttttgtgattggatggaagctaacacttgtgatc
ctgtctaccagccctctggtagtcttatcagcagcattttgttctaagatgatcatcaca
ttaaccagtaaggagctaacagcctattccaaagcaggtgcaatagcagaagaagtccta
tcatcagtgcgaactgttgtagcctttggaggacaagagaaggaaataaaaaggtataca
agtaggctgggagaagcaaaaaacattggtataaaaaaggcaattgcttctaagttgtcc
ctgggttttgtgtacctaattataaatggatgttatgggcttgctttttggtatggaact
accctgatccttgaagataattctgaatataccattgggtctgttcttgcagttttcttc
tgtgtaacttacagcagttattgcattggcttagcatcacctcactttgaaacctttgct
attgctagaggagcagcctttaaagttttcaagatcattgatgagaatccttctatagac
agtttttcttcagatggacacaaactcagtcacataaaagggacattggaatttgacaat
gtccggttcagttatccttcaagaccagatatccagattttgaaaggcctcagtctgaaa
attggtgctggacaaacagtggcattggttgggagcagtggatgtgggaagagcacaaca
gttcagttgctgcagaggttttatgatccacaagagggagtgatcaaaatagatggacat
gatatcagatctcttaatctgagacacttccgagaatgcattggtgtggtcagtcaggag
ccagttttatttgggacaactattagaaacaatataaggtatgggcgagaagatgtaact
gatcaagaaattgagaaggcaacaaaggaagctaatgcatatgattttataatggatctt
cctgaaaaatttaatacccttgtgggagaaagaggagcacaaatgagtggaggccagaaa
cagagaatagctatcgctcgagctttggtgcgcaaccctaagattctccttttagatgag
gccacatctgccctggatactgaaagtgaggcagtcgtccaagctgcactggaaaaggcc
agcagaggtcgaaccacaattgttatagctcaccggctttccaccattcagacagcagat
gtaatcatgaccatagtggatggcactgtggctgaaaaaggaacacatgcagagctgatg
gagaaaaaggggctatattattcacttgcaacagcccagtcaattaaaaaagcagagcac
agtgaagaatcagcagaaacagttctgaaaaatcatgaagaatcaccacccagcaacagc
ttgatctctgaaaaagcaagaataaaacatattccacaaaagatgtctgaagaagaagtc
aaacctgaagaggaacatctgccccaagtttctttgctgaaactttttaaattaaacaaa
tctgagtggcctttgattgcattagggacgctggctgccattataaatggagcatgttcc
cccctctttgccgtcatatttggtaaaattgtaacaatttttgaaataaaaaatatcagt
acctcatacaaagtgcagatccaacatgaagctaacattttgtccatcttatttgctggg
ataggtgttgtttgctttctgacttatttcttacagggattcctttacgggagatcagga
gaaatcctaacaatgagattaaggcatatggcatttaaagccatgctgcgacaggacatc
ttttggtttgatgataaaaaaaatagtacgggagctttaacaacaagattggccacagaa
gcagcacaagttcaaatggcagtaggctcaagacttggtgtaatagcacaaaacatttcc
accatgggattgtccatcatcatttcttttatatatggatgggagatgactctgctgatc
ctagtgattgctcccgtgcttacagtaactggaatgctggaagtttctgcactgactgga
ttcgccaacagagacaaaaaagaaatgcagagagccgggaagttggttcatggtttctat
acaaatgttgtatgttgcagaaatgctcaaaagaaagctcagatctacagttcctgttac
gcattcagccaggcttttctgtatttcacctatgctgcaggctttcgatttggggcatat
ttaattacagctggaagaatgacccctgagggcattttcgtggtttttacagcaattgca
tatggtgcagtggcagtaggtgagacattgacgtttgtacctgactatgccaaagccaga
tctggggctgcacacctgtttgctctgttcgaaaggactccagccattgatagctacagt
gaagcaggagataaaccagacacattcagtggaaggttagaattccgtgaagtctctttc
atttatccaactcgcccagatgttcccatcctgcaggatttgtctcttacaattgaacgg
ggacagactgtagcatttgttggaagcagtggatgtgggaaaagcacttctgttcagctc
ctacagaggttttatgaccctctgaaagggcaagtgctatttgatagcacagatgcgaag
catttgaatgtacagtggctacgctctcaaataggaatagtatcccaagagccagtgctt
tttgattgcagcattgctgaaaatattgcctatggagataacaatcggactgtgccaatg
gatgagataatagcagcagcaaaagcagcaaatatccatacttttatagaagaactccct
gagaaatacaacacacgagttggagataaaggaacacagctctctggcggccagaaacaa
cgaatagccattgcaagggctcttatccggcaaccaaaaatgttgttgttagatgaagcc
acttcagcacttgacaatgaaagtgaaaaggtggtacaacaagcccttgatcaggcacgg
aaaggaaggacctgcattgtgattgctcaccgactatcaaccatacagaatgcagatatc
attgttgtaattaacaatggaaaaataatagaagcaggaactcatcaccagctaatggca
aagcagaaagcatattttaatttagtaaatgcacaaatgtttctctaa
DBGET
integrated database retrieval system
