Gavialis gangeticus (Gharial): 109291712
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Entry
109291712 CDS
T07453
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109291712 (TRIM71)
04121 Ubiquitin system [BR:
ggn04121
]
109291712 (TRIM71)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109291712 (TRIM71)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109291712 (TRIM71)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109291712 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
TEN_NHL
Beta-prop_IFT122_1st
CRLF3_N
Vgb_lyase
DUF4094
Motif
Other DBs
NCBI-GeneID:
109291712
NCBI-ProteinID:
XP_019364350
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKMVQS
EVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQQVL
EEGRTIDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVMGYDHDGEPRLSGGDMISSVVMGPDGNLFGADVSD
QQNGTYVVSYRPQLEGEHLVSVMMCNQHIENSPFKVTVKSGRSYIGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACD
ISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNH
RVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtaggtcatagttttatctacctccaagatgcccttcaagattcaaga
accctcaccatccagctgctagcggacgctcagcaaggacgccaggctattcagctgagt
attgaacaggcccaagcagtggcagagcaagttgaaatgaaagctaaaatggtgcagtct
gaagtcaaagctgtgacaactagacataagaaggccctggaagaaagagagtgcgaactg
ctatggaaggtggaaaagattcgtcaagtcaaagctaagtcgctctacttgcaagttgaa
aagttgcgtcagaacctgaataaactggacaacacgattagtgctgttcagcaggtccta
gaggaggggcgcaccatagatattcttctggcccgggaccgcatgctggctcaggtgcag
gagctgaagaatgtgagaggccttctgcagccccaagaggatgacagaatcatgttcaca
cctcctgaccaggctttgtacatggccataaaatcaatggggtttgttagcagtggggct
tttgctcctctgaccaaagccactggggaaggtctcaaacgtgcactacagggcaaagtg
gcctccttcacagtgatgggatacgaccatgatggtgagccacgcctttcaggaggcgat
atgatctcttcagtggtgatgggccctgatggaaacctgtttggagccgatgtcagtgat
cagcaaaatgggacctatgtggtcagttacagaccacagctggagggagagcatcttgtt
tcagtcatgatgtgcaaccagcacattgagaacagtccattcaaggtcacggtgaaatct
gggcgcagttacattggcattgggctaccagggctttcgtttggcagtgagggagatagt
gatggcaagctgtgtcgtccctggggagtcagcgtagacaaagagggctacatcattgtt
gctgatcgcagcaataaccgaattcaggtgtttaagccttgtggcacctttcaccacaaa
tttggcacgttgggctcgcggcctggccagtttgatcgacctgcgggtgttgcctgtgac
atctcgcgtagaattgttgtggctgacaaggacaatcatcgcatccagatcttcacattt
gaggggcagttcattctgaaatttggggagaaaggaaccaagaatgggcaattcaattac
ccgtgggatgtggcagtcaactctgaaggcaaaatcctagtctctgacacgaggaaccac
cgagttcaactcttcgggcctgacggcgtgtttctgaataagtatggctttgaaggggca
ctctggaagcactttgattccccaaggggtgtgactttcaatcatgagggccatttagta
gtcacagatttcaacaaccatcgccttttggtcatccatccagattgccagtcagcacgc
ttccttgggtcagaaggcactggtaatggccagttcctgcgcccacagggtgtggcagtg
gatcaagaggggcgcatcattgtggctgattctaggaaccaccgagtgcagatatttgag
tccaatggtagctttttatgcaaatttggcactcagggaagtggctttggtcagatggac
cgtccttcgggtatagcagtcacccctgatggcatgattgttgtggtcgactttggaaac
aatcggattcttgtcttctaa
DBGET
integrated database retrieval system
