Gavialis gangeticus (Gharial): 109291731
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Entry
109291731 CDS
T07453
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04621
NOD-like receptor signaling pathway
ggn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109291731 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109291731 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ggn04054
]
109291731 (NOD1)
Pattern recognition receptors [BR:
ggn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109291731 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
NOD2_WH
LRR_4
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
109291731
NCBI-ProteinID:
XP_019364367
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MVILRMAGEPYANIKIIQQVPSGTSPPSFINLLKIHREHLVTSIRNTQCLIDNLIKNEYF
SNEDAEIAAQFPTQTDKVRKILDLVQSKGEEVSEYFIYTLQKVTDAYHELQPWLDEIRFQ
PSENIQSKLVVNTDPVSRYRQKLKYELGRDTKFVMSYAQKEEMLLEEIYSDNIMELVSYA
NESLGNVNCLEALFDDKTGLINEDGETICVFGDAGIGKSILLQKMQSLWARGELDVGAKY
FFRFRCRMFSCFKENETISLKDLLFKYNCYPDQDQEEVFNHILQFPHAVLFTFDGFDEIY
SDFDVNSIPEICSPSEPIHPLALLVSLLRGKLLKGSRKILTARTGTEVHQNIIRKKVLLR
GFSSKNLKAYTKMFFKDEGRQTLVLNHLEANPNLCSLCSVPLFCWIIFKCYEHLHSMFDI
HELPDYSVTLTDVFLLMTEVHLNRTLKTDLLKKNTRSQVETFRSKKETLLSLGRIAYQGM
EKSLFVFEHEEVMAVNVLEEDLQLGFLRTVHNYAGCGDQSSYEFLHLTLQSFFTAFFLIT
EEKVGTKELLKFFNECSTLETTQFTCLPIPWFNNRPIREDPFRNNEHFHFTNLFLCGLLS
KARQKILRHLVSPMAIKRKRNALLTYLSESMKSHMKGLTRSRLANYKQVQVTPNFVWMLR
CIYETQSEKVGKLAAKDMRANYIKLTYCNAYSADCSAISFIVHHFQKHLALDLDNNNIND
YGVRQLLPCFSKLLVIRLSVNQITDHGVRVLYEELSKYKIVSYLGLYNNQITDVGAKYVA
KLIEECPSLTYVKIGANKITTEGGKSLALAIQKSKTMFEIGMWGNQIGDEGAKTFADALR
NHPTLTNVSLAFNGITTEGGKSIAEAMQHNNTVRIFWLTKNDLDDEAAESFAEMVKVNKK
LAHLWLIQNRITVKGAQYLCEALQENTAIKEICLNGNLINQEEAKAFENEERIVCF
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggttatcttaagaatggcaggtgagccatatgctaatataaaaattatccaacaagta
ccctcaggaacaagtcctccatcattcattaacttgctgaaaatacatcgagaacattta
gtcaccagtatccgaaacacccagtgtttgattgacaacttgattaagaatgaatacttc
tcaaatgaagacgctgagattgctgcacagtttccaactcaaacagataaggttcgtaaa
attctggatctggttcaaagcaagggagaagaagtttcagaatacttcatctataccctg
cagaaagtcactgatgcttatcatgagcttcagccctggttggatgaaataaggtttcag
ccttctgagaatattcagagtaaattggttgtaaatacagatccagttagcaggtaccgt
cagaaactcaagtatgaattgggaagagacacaaagtttgtcatgtcatatgctcagaag
gaggagatgctgctggaggaaatctactctgataatatcatggagctggtcagttatgcc
aatgagagtcttggcaatgtgaactgcttagaagccctgtttgatgataaaactgggctg
attaatgaagatggagagaccatctgtgtctttggtgatgcaggaattggaaaatccatt
ttgctgcaaaaaatgcaaagtctttgggcccgaggagagttggatgttggtgccaaatat
tttttccggttccggtgcaggatgtttagctgctttaaggagaatgaaactatcagtctg
aaagatcttctgttcaaatacaactgttacccagaccaggaccaagaggaggtattcaac
cacatcctgcagttccctcacgcagtcctcttcacgtttgatgggtttgatgagatctat
tctgactttgacgtaaacagcattcctgagatctgctcacccagtgaacctatccaccca
ctcgccctgttggtgagtcttcttagaggaaagcttttgaaaggatcaaggaaaattctc
acagcaaggactgggactgaggtccatcaaaacattattaggaagaaagtattgctccga
ggcttctccagcaaaaacttgaaggcatacactaagatgtttttcaaagatgaggggcgc
caaacattggtactgaatcatctagaagctaaccccaatctctgtagtttgtgttcagta
cctttgttttgttggattatttttaaatgctatgaacatttgcattccatgtttgacatc
catgagcttccagattactctgttacattgacggatgtgtttttgctcatgactgaagtc
cacttgaaccgaactctgaaaacagatttgctgaagaagaacaccaggagccaagtggag
acattcaggtcaaaaaaggaaaccctgctgtctttgggtagaatagcctatcagggaatg
gagaagtctctctttgtctttgagcatgaggaggtcatggctgtgaacgtattggaagag
gatttgcagttgggattcctcaggacagttcacaactatgcaggctgtggagaccagtcc
tcttatgagttcctacacttgaccctccagtcttttttcacagcttttttcctaatcact
gaagagaaagtgggtacaaaagagttattgaagttttttaatgaatgctccaccctcgag
actacccaatttacctgcctccctattccatggttcaataatcggccaataagagaagat
cctttccgaaacaatgaacactttcacttcaccaaccttttcctctgtggtctgctttcc
aaagctagacagaagatcttgagacatttagtctcacctatggccattaagaggaaaaga
aatgctcttttaacatatctctcagaaagcatgaaatctcatatgaagggcctgacacga
tcgaggcttgcaaactataagcaagttcaggttacacccaattttgtttggatgctgcgg
tgcatttatgagactcaaagtgaaaaagtggggaagctggctgctaaagacatgcgagcc
aattacatcaaactcacttactgcaatgcctattcagctgactgcagtgccatttccttc
attgtgcatcatttccaaaagcatctagctctcgatctagacaacaacaacatcaatgac
tatggagttagacaactgcttccttgctttagcaagcttctggtgatcaggctgagtgtt
aatcagatcacagatcatggagtaagagtgctgtacgaagaactctccaagtacaagatt
gtgtcttacttgggcctgtacaacaaccaaattacagatgttggagccaaatatgttgca
aaactcattgaagaatgcccaagcctcacatatgttaaaataggagcaaacaaaataacc
accgaaggagggaaaagtcttgcccttgctatccagaagagcaaaacaatgtttgaaatc
ggaatgtggggcaatcaaattggagatgaaggagctaaaacttttgctgatgcgctcagg
aatcatcctactttaacaaacgtgagtcttgcattcaatggcattacaactgagggaggc
aaaagcattgctgaagctatgcagcacaacaacactgtgaggatattttggttgactaaa
aatgacttggatgacgaggctgcagagagctttgcagagatggtgaaagtcaacaagaag
ctagcacatttgtggcttatccagaatcgaattacagtcaaaggggcccagtatctctgt
gaagctctccaggagaacactgccattaaagagatctgtttaaacgggaacttgataaac
caggaagaggccaaagcctttgaaaatgaagagcggattgtttgcttttga
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